Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 U2.14-201ENST00000615943 113 ntBASIC0.11□□□□□ -2.39
CDH4P55283 AL365265.1-201ENST00000621045 234 ntBASIC0.11□□□□□ -2.39
CDH4P55283 MIR6841-201ENST00000637129 72 ntBASIC0.11□□□□□ -2.39
CDH4P55283 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.11□□□□□ -2.39
CDH4P55283 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CDH4P55283 Y_RNA.115-201ENST00000363272 98 ntBASIC0.1□□□□□ -2.39
CDH4P55283 RNU6-867P-201ENST00000364956 107 ntBASIC0.1□□□□□ -2.39
CDH4P55283 RNU6-1292P-201ENST00000383856 107 ntBASIC0.1□□□□□ -2.39
CDH4P55283 RNU6-1109P-201ENST00000391187 107 ntBASIC0.1□□□□□ -2.39
CDH4P55283 Y_RNA.618-201ENST00000410949 107 ntBASIC0.1□□□□□ -2.39
CDH4P55283 RNU7-80P-201ENST00000459562 61 ntBASIC0.1□□□□□ -2.39
CDH4P55283 TRBVB-201ENST00000477100 408 ntBASIC0.1□□□□□ -2.39
CDH4P55283 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
CDH4P55283 AL442663.2-201ENST00000554385 511 ntBASIC0.1□□□□□ -2.39
CDH4P55283 AC141846.1-201ENST00000568348 142 ntBASIC0.1□□□□□ -2.39
CDH4P55283 AL365205.2-201ENST00000594586 68 ntBASIC0.1□□□□□ -2.39
CDH4P55283 MIR6082-201ENST00000613604 109 ntBASIC0.1□□□□□ -2.39
CDH4P55283 Y_RNA.202-201ENST00000364083 110 ntBASIC0.09□□□□□ -2.4
CDH4P55283 SNORA33.2-201ENST00000365413 134 ntBASIC0.09□□□□□ -2.4
CDH4P55283 Y_RNA.476-201ENST00000384347 108 ntBASIC0.09□□□□□ -2.4
CDH4P55283 RNA5SP237-201ENST00000410414 113 ntBASIC0.09□□□□□ -2.4
CDH4P55283 AL512326.2-201ENST00000426359 151 ntBASIC0.09□□□□□ -2.4
CDH4P55283 AC073261.1-201ENST00000429409 121 ntBASIC0.09□□□□□ -2.4
CDH4P55283 MIR4491-201ENST00000581087 68 ntBASIC0.09□□□□□ -2.4
CDH4P55283 AL442067.1-201ENST00000613261 223 ntBASIC0.09□□□□□ -2.4
CDH4P55283 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.09□□□□□ -2.4
CDH4P55283 AL596211.1-201ENST00000569873 2277 ntBASIC0.08□□□□□ -2.4
CDH4P55283 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
CDH4P55283 MIR335-201ENST00000362173 94 ntBASIC0.08□□□□□ -2.4
CDH4P55283 Y_RNA.32-201ENST00000362589 110 ntBASIC0.08□□□□□ -2.4
CDH4P55283 Y_RNA.176-201ENST00000363815 109 ntBASIC0.08□□□□□ -2.4
CDH4P55283 Y_RNA.454-201ENST00000384224 113 ntBASIC0.08□□□□□ -2.4
CDH4P55283 Y_RNA.512-201ENST00000384518 102 ntBASIC0.08□□□□□ -2.4
CDH4P55283 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
CDH4P55283 RNA5SP63-201ENST00000391225 112 ntBASIC0.08□□□□□ -2.4
CDH4P55283 RNU2-59P-201ENST00000410482 191 ntBASIC0.08□□□□□ -2.4
CDH4P55283 RNU4-43P-201ENST00000410628 137 ntBASIC0.08□□□□□ -2.4
CDH4P55283 SNORA31.14-201ENST00000516728 116 ntBASIC0.08□□□□□ -2.4
CDH4P55283 RNA5SP268-201ENST00000516828 124 ntBASIC0.08□□□□□ -2.4
CDH4P55283 MIR6828-201ENST00000636181 60 ntBASIC0.08□□□□□ -2.4
CDH4P55283 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
CDH4P55283 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
CDH4P55283 RNU6-403P-201ENST00000363163 104 ntBASIC0.07□□□□□ -2.4
CDH4P55283 Y_RNA.416-201ENST00000384014 113 ntBASIC0.07□□□□□ -2.4
CDH4P55283 Y_RNA.590-201ENST00000410140 107 ntBASIC0.07□□□□□ -2.4
CDH4P55283 RNU6-765P-201ENST00000516916 99 ntBASIC0.07□□□□□ -2.4
CDH4P55283 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
CDH4P55283 MIR3152-201ENST00000579801 74 ntBASIC0.07□□□□□ -2.4
CDH4P55283 AL356055.1-201ENST00000602528 446 ntBASIC0.07□□□□□ -2.4
CDH4P55283 MIR2909-201ENST00000617113 69 ntBASIC0.07□□□□□ -2.4
CDH4P55283 AL109933.3-201ENST00000619095 188 ntBASIC0.07□□□□□ -2.4
CDH4P55283 AC021613.1-201ENST00000623880 111 ntBASIC0.07□□□□□ -2.4
CDH4P55283 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.07□□□□□ -2.4
CDH4P55283 SNORA22.1-201ENST00000362701 134 ntBASIC0.06□□□□□ -2.4
CDH4P55283 RNA5SP457-201ENST00000363657 124 ntBASIC0.06□□□□□ -2.4
CDH4P55283 RNU6-728P-201ENST00000365375 104 ntBASIC0.06□□□□□ -2.4
CDH4P55283 RNU6-949P-201ENST00000384040 107 ntBASIC0.06□□□□□ -2.4
CDH4P55283 MT-TW-201ENST00000387382 68 ntBASIC0.06□□□□□ -2.4
CDH4P55283 SEPT7P4-201ENST00000437076 306 ntBASIC0.06□□□□□ -2.4
CDH4P55283 RNU6-469P-201ENST00000516253 101 ntBASIC0.06□□□□□ -2.4
CDH4P55283 SCARNA15-202ENST00000516881 127 ntBASIC0.06□□□□□ -2.4
CDH4P55283 MIR4643-201ENST00000577473 78 ntBASIC0.06□□□□□ -2.4
CDH4P55283 AC011921.3-201ENST00000605540 361 ntBASIC0.06□□□□□ -2.4
CDH4P55283 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.06□□□□□ -2.4
CDH4P55283 MIR7107-201ENST00000611489 80 ntBASIC0.06□□□□□ -2.4
CDH4P55283 MIR6755-201ENST00000619993 66 ntBASIC0.06□□□□□ -2.4
CDH4P55283 RNU6-978P-201ENST00000364371 103 ntBASIC0.05□□□□□ -2.4
CDH4P55283 RNU6-639P-201ENST00000384074 107 ntBASIC0.05□□□□□ -2.4
CDH4P55283 Y_RNA.518-201ENST00000384552 113 ntBASIC0.05□□□□□ -2.4
CDH4P55283 RNU6-291P-201ENST00000384720 107 ntBASIC0.05□□□□□ -2.4
CDH4P55283 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
CDH4P55283 RPL39P25-201ENST00000449384 154 ntBASIC0.05□□□□□ -2.4
CDH4P55283 Y_RNA.701-201ENST00000516812 110 ntBASIC0.05□□□□□ -2.4
CDH4P55283 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
CDH4P55283 Y_RNA.174-201ENST00000363781 105 ntBASIC0.04□□□□□ -2.4
CDH4P55283 RNY1P13-201ENST00000365030 105 ntBASIC0.04□□□□□ -2.4
CDH4P55283 RNU4-17P-201ENST00000365598 141 ntBASIC0.04□□□□□ -2.4
CDH4P55283 Y_RNA.483-201ENST00000384380 101 ntBASIC0.04□□□□□ -2.4
CDH4P55283 SNORA18-201ENST00000384416 132 ntBASIC0.04□□□□□ -2.4
CDH4P55283 Y_RNA.536-201ENST00000384621 113 ntBASIC0.04□□□□□ -2.4
CDH4P55283 Y_RNA.539-201ENST00000384635 107 ntBASIC0.04□□□□□ -2.4
CDH4P55283 SNORA20-201ENST00000384662 132 ntBASIC0.04□□□□□ -2.4
CDH4P55283 SUMO1P3-201ENST00000439961 304 ntBASIC0.04□□□□□ -2.4
CDH4P55283 Y_RNA.679-201ENST00000516416 91 ntBASIC0.04□□□□□ -2.4
CDH4P55283 RNU6-1258P-201ENST00000516911 111 ntBASIC0.04□□□□□ -2.4
CDH4P55283 SCARNA16.5-201ENST00000517114 183 ntBASIC0.04□□□□□ -2.4
CDH4P55283 RNA5SP47-201ENST00000517230 109 ntBASIC0.04□□□□□ -2.4
CDH4P55283 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.04□□□□□ -2.4
CDH4P55283 MTND5P34-201ENST00000568888 325 ntBASIC0.04□□□□□ -2.4
CDH4P55283 SNORD28-201ENST00000384706 75 ntBASIC0.03□□□□□ -2.4
CDH4P55283 SNORA79-201ENST00000408376 140 ntBASIC0.03□□□□□ -2.4
CDH4P55283 SNORA25.16-201ENST00000516741 121 ntBASIC0.03□□□□□ -2.4
CDH4P55283 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.03□□□□□ -2.4
CDH4P55283 Y_RNA.85-201ENST00000363014 111 ntBASIC0.02□□□□□ -2.41
CDH4P55283 RNU6-1099P-201ENST00000363533 107 ntBASIC0.02□□□□□ -2.41
CDH4P55283 RNU6-103P-201ENST00000363686 107 ntBASIC0.02□□□□□ -2.41
CDH4P55283 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
CDH4P55283 RNU6-472P-201ENST00000384299 107 ntBASIC0.02□□□□□ -2.41
CDH4P55283 SNORA72.6-201ENST00000384520 129 ntBASIC0.02□□□□□ -2.41
CDH4P55283 RNU6-713P-201ENST00000384761 107 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms