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Protein–RNA interactions for Protein: P55283
CDH4, Cadherin-4, human
Predictions only
Length
916 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH4
P55283
U2.14-201
ENST00000615943
113 nt
BASIC
0.11
□□□□□ -2.39
CDH4
P55283
AL365265.1-201
ENST00000621045
234 nt
BASIC
0.11
□□□□□ -2.39
CDH4
P55283
MIR6841-201
ENST00000637129
72 nt
BASIC
0.11
□□□□□ -2.39
CDH4
P55283
VPS35-212
ENST00000640313
141 nt
TSL 5
BASIC
0.11
□□□□□ -2.39
CDH4
P55283
MT-ATP8-201
ENST00000361851
207 nt
APPRIS P1
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
Y_RNA.115-201
ENST00000363272
98 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
RNU6-867P-201
ENST00000364956
107 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
RNU6-1292P-201
ENST00000383856
107 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
RNU6-1109P-201
ENST00000391187
107 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
Y_RNA.618-201
ENST00000410949
107 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
RNU7-80P-201
ENST00000459562
61 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
TRBVB-201
ENST00000477100
408 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
AC069113.3-201
ENST00000521019
150 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
AL442663.2-201
ENST00000554385
511 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
AC141846.1-201
ENST00000568348
142 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
AL365205.2-201
ENST00000594586
68 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
MIR6082-201
ENST00000613604
109 nt
BASIC
0.1
□□□□□ -2.39
CDH4
P55283
Y_RNA.202-201
ENST00000364083
110 nt
BASIC
0.09
□□□□□ -2.4
CDH4
P55283
SNORA33.2-201
ENST00000365413
134 nt
BASIC
0.09
□□□□□ -2.4
CDH4
P55283
Y_RNA.476-201
ENST00000384347
108 nt
BASIC
0.09
□□□□□ -2.4
CDH4
P55283
RNA5SP237-201
ENST00000410414
113 nt
BASIC
0.09
□□□□□ -2.4
CDH4
P55283
AL512326.2-201
ENST00000426359
151 nt
BASIC
0.09
□□□□□ -2.4
CDH4
P55283
AC073261.1-201
ENST00000429409
121 nt
BASIC
0.09
□□□□□ -2.4
CDH4
P55283
MIR4491-201
ENST00000581087
68 nt
BASIC
0.09
□□□□□ -2.4
CDH4
P55283
AL442067.1-201
ENST00000613261
223 nt
BASIC
0.09
□□□□□ -2.4
CDH4
P55283
NEAT1_2.1-201
ENST00000620525
105 nt
BASIC
0.09
□□□□□ -2.4
CDH4
P55283
AL596211.1-201
ENST00000569873
2277 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
DEFB131A-201
ENST00000334879
213 nt
APPRIS P1
TSL 1 (best)
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
MIR335-201
ENST00000362173
94 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
Y_RNA.32-201
ENST00000362589
110 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
Y_RNA.176-201
ENST00000363815
109 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
Y_RNA.454-201
ENST00000384224
113 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
Y_RNA.512-201
ENST00000384518
102 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
TRAJ2-201
ENST00000390535
66 nt
APPRIS P1
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
RNA5SP63-201
ENST00000391225
112 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
RNU2-59P-201
ENST00000410482
191 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
RNU4-43P-201
ENST00000410628
137 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
SNORA31.14-201
ENST00000516728
116 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
RNA5SP268-201
ENST00000516828
124 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
MIR6828-201
ENST00000636181
60 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
MIR4315-1-201
ENST00000636800
73 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
MIR4315-2-201
ENST00000640925
73 nt
BASIC
0.08
□□□□□ -2.4
CDH4
P55283
RNU6-403P-201
ENST00000363163
104 nt
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
Y_RNA.416-201
ENST00000384014
113 nt
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
Y_RNA.590-201
ENST00000410140
107 nt
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
RNU6-765P-201
ENST00000516916
99 nt
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
AC112693.2-201
ENST00000556538
232 nt
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
MIR3152-201
ENST00000579801
74 nt
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
AL356055.1-201
ENST00000602528
446 nt
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
MIR2909-201
ENST00000617113
69 nt
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
AL109933.3-201
ENST00000619095
188 nt
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
AC021613.1-201
ENST00000623880
111 nt
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
ABCA9-AS1-203
ENST00000627596
426 nt
TSL 5
BASIC
0.07
□□□□□ -2.4
CDH4
P55283
SNORA22.1-201
ENST00000362701
134 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
RNA5SP457-201
ENST00000363657
124 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
RNU6-728P-201
ENST00000365375
104 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
RNU6-949P-201
ENST00000384040
107 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
MT-TW-201
ENST00000387382
68 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
SEPT7P4-201
ENST00000437076
306 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
RNU6-469P-201
ENST00000516253
101 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
SCARNA15-202
ENST00000516881
127 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
MIR4643-201
ENST00000577473
78 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
AC011921.3-201
ENST00000605540
361 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
DLEU2_5.2-201
ENST00000610606
84 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
MIR7107-201
ENST00000611489
80 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
MIR6755-201
ENST00000619993
66 nt
BASIC
0.06
□□□□□ -2.4
CDH4
P55283
RNU6-978P-201
ENST00000364371
103 nt
BASIC
0.05
□□□□□ -2.4
CDH4
P55283
RNU6-639P-201
ENST00000384074
107 nt
BASIC
0.05
□□□□□ -2.4
CDH4
P55283
Y_RNA.518-201
ENST00000384552
113 nt
BASIC
0.05
□□□□□ -2.4
CDH4
P55283
RNU6-291P-201
ENST00000384720
107 nt
BASIC
0.05
□□□□□ -2.4
CDH4
P55283
AC069271.1-201
ENST00000445577
156 nt
BASIC
0.05
□□□□□ -2.4
CDH4
P55283
RPL39P25-201
ENST00000449384
154 nt
BASIC
0.05
□□□□□ -2.4
CDH4
P55283
Y_RNA.701-201
ENST00000516812
110 nt
BASIC
0.05
□□□□□ -2.4
CDH4
P55283
SNORA42.1-201
ENST00000363515
137 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
Y_RNA.174-201
ENST00000363781
105 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
RNY1P13-201
ENST00000365030
105 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
RNU4-17P-201
ENST00000365598
141 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
Y_RNA.483-201
ENST00000384380
101 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
SNORA18-201
ENST00000384416
132 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
Y_RNA.536-201
ENST00000384621
113 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
Y_RNA.539-201
ENST00000384635
107 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
SNORA20-201
ENST00000384662
132 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
SUMO1P3-201
ENST00000439961
304 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
Y_RNA.679-201
ENST00000516416
91 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
RNU6-1258P-201
ENST00000516911
111 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
SCARNA16.5-201
ENST00000517114
183 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
RNA5SP47-201
ENST00000517230
109 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
IGHVIII-67-2-201
ENST00000519849
88 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
MTND5P34-201
ENST00000568888
325 nt
BASIC
0.04
□□□□□ -2.4
CDH4
P55283
SNORD28-201
ENST00000384706
75 nt
BASIC
0.03
□□□□□ -2.4
CDH4
P55283
SNORA79-201
ENST00000408376
140 nt
BASIC
0.03
□□□□□ -2.4
CDH4
P55283
SNORA25.16-201
ENST00000516741
121 nt
BASIC
0.03
□□□□□ -2.4
CDH4
P55283
G3BP1-214
ENST00000627077
114 nt
TSL 5
BASIC
0.03
□□□□□ -2.4
CDH4
P55283
Y_RNA.85-201
ENST00000363014
111 nt
BASIC
0.02
□□□□□ -2.41
CDH4
P55283
RNU6-1099P-201
ENST00000363533
107 nt
BASIC
0.02
□□□□□ -2.41
CDH4
P55283
RNU6-103P-201
ENST00000363686
107 nt
BASIC
0.02
□□□□□ -2.41
CDH4
P55283
SNORD114-9-201
ENST00000364370
72 nt
BASIC
0.02
□□□□□ -2.41
CDH4
P55283
RNU6-472P-201
ENST00000384299
107 nt
BASIC
0.02
□□□□□ -2.41
CDH4
P55283
SNORA72.6-201
ENST00000384520
129 nt
BASIC
0.02
□□□□□ -2.41
CDH4
P55283
RNU6-713P-201
ENST00000384761
107 nt
BASIC
0.02
□□□□□ -2.41
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Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms