Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CLCNKAP51800 SNORA22.1-201ENST00000362701 134 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 RNU6-774P-201ENST00000363238 107 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 SNORD114-27-201ENST00000363766 70 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 RNU6-690P-201ENST00000365242 106 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 RNU6-1062P-201ENST00000383908 107 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 MT-TN-201ENST00000387400 73 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 AL603914.1-201ENST00000401964 204 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 RNA5SP261-201ENST00000410536 106 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 RNU6-240P-201ENST00000516098 97 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 MIR4264-201ENST00000583520 66 ntBASIC1.02□□□□□ -2.25
CLCNKAP51800 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CLCNKAP51800 Y_RNA.226-201ENST00000364337 114 ntBASIC1.01□□□□□ -2.25
CLCNKAP51800 RNY1P5-201ENST00000383890 115 ntBASIC1.01□□□□□ -2.25
CLCNKAP51800 snoU13.21-201ENST00000459368 105 ntBASIC1.01□□□□□ -2.25
CLCNKAP51800 SNORD124-201ENST00000459577 104 ntBASIC1.01□□□□□ -2.25
CLCNKAP51800 uc_338.6-201ENST00000613544 171 ntBASIC1.01□□□□□ -2.25
CLCNKAP51800 AC106800.4-201ENST00000614905 153 ntBASIC1.01□□□□□ -2.25
CLCNKAP51800 MIR6740-201ENST00000618268 113 ntBASIC1.01□□□□□ -2.25
CLCNKAP51800 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CLCNKAP51800 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1□□□□□ -2.25
CLCNKAP51800 MIR377-201ENST00000362145 69 ntBASIC1□□□□□ -2.25
CLCNKAP51800 MIR96-201ENST00000362288 78 ntBASIC1□□□□□ -2.25
CLCNKAP51800 Y_RNA.168-201ENST00000363740 102 ntBASIC1□□□□□ -2.25
CLCNKAP51800 SNORD113.3-201ENST00000364630 78 ntBASIC1□□□□□ -2.25
CLCNKAP51800 RNU1-93P-201ENST00000364704 169 ntBASIC1□□□□□ -2.25
CLCNKAP51800 Y_RNA.430-201ENST00000384081 110 ntBASIC1□□□□□ -2.25
CLCNKAP51800 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
CLCNKAP51800 POLR2J4-204ENST00000418424 324 ntBASIC1□□□□□ -2.25
CLCNKAP51800 RNU7-62P-201ENST00000458856 62 ntBASIC1□□□□□ -2.25
CLCNKAP51800 AP001328.1-201ENST00000528550 176 ntBASIC1□□□□□ -2.25
CLCNKAP51800 MIR3152-201ENST00000579801 74 ntBASIC1□□□□□ -2.25
CLCNKAP51800 MIR3133-201ENST00000583157 78 ntBASIC1□□□□□ -2.25
CLCNKAP51800 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
CLCNKAP51800 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CLCNKAP51800 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
CLCNKAP51800 Y_RNA.294-201ENST00000364916 102 ntBASIC0.99□□□□□ -2.25
CLCNKAP51800 MIR588-201ENST00000384900 83 ntBASIC0.99□□□□□ -2.25
CLCNKAP51800 RNA5SP144-201ENST00000410846 116 ntBASIC0.99□□□□□ -2.25
CLCNKAP51800 RNA5SP247-201ENST00000411181 105 ntBASIC0.99□□□□□ -2.25
CLCNKAP51800 RNU6-1258P-201ENST00000516911 111 ntBASIC0.99□□□□□ -2.25
CLCNKAP51800 Y_RNA.757-201ENST00000578934 114 ntBASIC0.99□□□□□ -2.25
CLCNKAP51800 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.99□□□□□ -2.25
CLCNKAP51800 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
CLCNKAP51800 AC108081.1-201ENST00000604358 221 ntBASIC0.99□□□□□ -2.25
CLCNKAP51800 AC011603.4-201ENST00000611325 277 ntBASIC0.99□□□□□ -2.25
CLCNKAP51800 Y_RNA.171-201ENST00000363760 102 ntBASIC0.98□□□□□ -2.25
CLCNKAP51800 RNU6-580P-201ENST00000365159 107 ntBASIC0.98□□□□□ -2.25
CLCNKAP51800 Y_RNA.366-201ENST00000365540 102 ntBASIC0.98□□□□□ -2.25
CLCNKAP51800 AC133485.4-201ENST00000561835 220 ntBASIC0.98□□□□□ -2.25
CLCNKAP51800 AC138907.4-201ENST00000570107 226 ntBASIC0.98□□□□□ -2.25
CLCNKAP51800 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.98□□□□□ -2.25
CLCNKAP51800 AP001340.1-201ENST00000624405 217 ntBASIC0.98□□□□□ -2.25
CLCNKAP51800 AC010332.2-201ENST00000613083 1904 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 Y_RNA.343-201ENST00000365354 112 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 Y_RNA.354-201ENST00000365448 111 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 RNU6-1237P-201ENST00000384777 107 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 SNORD111-201ENST00000408139 94 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 MIR1287-201ENST00000408492 90 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 RNU6-994P-201ENST00000410507 111 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 AC015818.7-201ENST00000428754 109 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 AC087499.7-201ENST00000441958 109 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.97□□□□□ -2.25
CLCNKAP51800 snoU13.2-201ENST00000459201 104 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 RNU2-35P-201ENST00000516446 142 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 Y_RNA.703-201ENST00000516846 111 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 AC021443.1-201ENST00000604478 211 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
CLCNKAP51800 Y_RNA.568-201ENST00000384742 113 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 RNU6-1165P-201ENST00000410119 107 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 SNORD83.1-201ENST00000411362 77 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.96□□□□□ -2.26
CLCNKAP51800 AC113410.1-201ENST00000505029 247 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 Y_RNA.692-201ENST00000516627 105 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 RNU6-113P-201ENST00000516653 101 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 MIR3121-201ENST00000579680 77 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 MIR4305-201ENST00000583252 102 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.96□□□□□ -2.26
CLCNKAP51800 Y_RNA.114-201ENST00000363265 113 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 Y_RNA.191-201ENST00000363972 113 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 RNU6-187P-201ENST00000384139 106 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 Y_RNA.470-201ENST00000384307 117 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 RNU6-342P-201ENST00000384521 104 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 RNU6-257P-201ENST00000410238 98 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 AL022718.1-201ENST00000412004 84 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 AL512326.2-201ENST00000426359 151 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 MTND4LP9-201ENST00000427694 174 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 RNU7-164P-201ENST00000459221 62 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 U7.2-201ENST00000607576 63 ntBASIC0.95□□□□□ -2.26
CLCNKAP51800 SNORD114-22-201ENST00000365423 72 ntBASIC0.94□□□□□ -2.26
CLCNKAP51800 RNU6-746P-201ENST00000384112 109 ntBASIC0.94□□□□□ -2.26
CLCNKAP51800 MIR563-201ENST00000385080 79 ntBASIC0.94□□□□□ -2.26
CLCNKAP51800 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.94□□□□□ -2.26
CLCNKAP51800 RNU7-113P-201ENST00000459273 62 ntBASIC0.94□□□□□ -2.26
CLCNKAP51800 RNU7-123P-201ENST00000515911 60 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms