Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC103810.8-201ENST00000607347 118 ntBASIC1.76□□□□□ -2.13
CLK3P49761 MIR4791-201ENST00000607666 84 ntBASIC1.76□□□□□ -2.13
CLK3P49761 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CLK3P49761 SNORD45B-201ENST00000364617 72 ntBASIC1.75□□□□□ -2.13
CLK3P49761 RNU6-1201P-201ENST00000384227 107 ntBASIC1.75□□□□□ -2.13
CLK3P49761 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CLK3P49761 RNU6-913P-201ENST00000390913 95 ntBASIC1.75□□□□□ -2.13
CLK3P49761 RNU6-644P-201ENST00000391155 98 ntBASIC1.75□□□□□ -2.13
CLK3P49761 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.75□□□□□ -2.13
CLK3P49761 MIR1270-201ENST00000459320 83 ntBASIC1.75□□□□□ -2.13
CLK3P49761 RN7SL429P-201ENST00000479090 223 ntBASIC1.75□□□□□ -2.13
CLK3P49761 RN7SL489P-201ENST00000486185 223 ntBASIC1.75□□□□□ -2.13
CLK3P49761 RN7SL327P-201ENST00000488659 223 ntBASIC1.75□□□□□ -2.13
CLK3P49761 RNU1-41P-201ENST00000516161 162 ntBASIC1.75□□□□□ -2.13
CLK3P49761 RNU6-795P-201ENST00000516323 103 ntBASIC1.75□□□□□ -2.13
CLK3P49761 RNU1-48P-201ENST00000516400 162 ntBASIC1.75□□□□□ -2.13
CLK3P49761 SNORA44.1-201ENST00000517031 108 ntBASIC1.75□□□□□ -2.13
CLK3P49761 MIR8074-201ENST00000615081 81 ntBASIC1.75□□□□□ -2.13
CLK3P49761 RN7SL853P-201ENST00000617250 223 ntBASIC1.75□□□□□ -2.13
CLK3P49761 SNORD3E-202ENST00000627253 216 ntBASIC1.75□□□□□ -2.13
CLK3P49761 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CLK3P49761 MIR424-201ENST00000362227 98 ntBASIC1.74□□□□□ -2.13
CLK3P49761 RNU6-60P-201ENST00000364792 103 ntBASIC1.74□□□□□ -2.13
CLK3P49761 MIR583-201ENST00000384846 75 ntBASIC1.74□□□□□ -2.13
CLK3P49761 RNU6-1275P-201ENST00000391087 107 ntBASIC1.74□□□□□ -2.13
CLK3P49761 RNU6-1190P-201ENST00000410811 104 ntBASIC1.74□□□□□ -2.13
CLK3P49761 MRPL35P3-201ENST00000421557 364 ntBASIC1.74□□□□□ -2.13
CLK3P49761 snoU13.16-201ENST00000459350 104 ntBASIC1.74□□□□□ -2.13
CLK3P49761 RNU6-521P-201ENST00000516663 105 ntBASIC1.74□□□□□ -2.13
CLK3P49761 DEFB122-202ENST00000569013 197 ntBASIC1.74□□□□□ -2.13
CLK3P49761 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
CLK3P49761 MIR4777-201ENST00000583710 86 ntBASIC1.74□□□□□ -2.13
CLK3P49761 U7.3-201ENST00000616123 62 ntBASIC1.74□□□□□ -2.13
CLK3P49761 MIR1245B-201ENST00000636115 69 ntBASIC1.74□□□□□ -2.13
CLK3P49761 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.74□□□□□ -2.13
CLK3P49761 MIR494-201ENST00000349529 81 ntBASIC1.73□□□□□ -2.13
CLK3P49761 Y_RNA.17-201ENST00000362433 111 ntBASIC1.73□□□□□ -2.13
CLK3P49761 RNU6-1313P-201ENST00000362622 102 ntBASIC1.73□□□□□ -2.13
CLK3P49761 Y_RNA.95-201ENST00000363079 95 ntBASIC1.73□□□□□ -2.13
CLK3P49761 RNY1P10-201ENST00000363268 113 ntBASIC1.73□□□□□ -2.13
CLK3P49761 RNU6-573P-201ENST00000383938 106 ntBASIC1.73□□□□□ -2.13
CLK3P49761 AL451046.2-201ENST00000403074 277 ntBASIC1.73□□□□□ -2.13
CLK3P49761 Y_RNA.593-201ENST00000410292 98 ntBASIC1.73□□□□□ -2.13
CLK3P49761 JTBP1-201ENST00000441314 247 ntBASIC1.73□□□□□ -2.13
CLK3P49761 SNORA74.3-201ENST00000517108 154 ntBASIC1.73□□□□□ -2.13
CLK3P49761 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.73□□□□□ -2.13
CLK3P49761 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
CLK3P49761 MIR30A-201ENST00000385092 71 ntBASIC1.72□□□□□ -2.13
CLK3P49761 RNU6-592P-201ENST00000411333 103 ntBASIC1.72□□□□□ -2.13
CLK3P49761 Y_RNA.685-201ENST00000516532 108 ntBASIC1.72□□□□□ -2.13
CLK3P49761 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.72□□□□□ -2.13
CLK3P49761 MIR4439-201ENST00000583746 80 ntBASIC1.72□□□□□ -2.13
CLK3P49761 FAM106DP-201ENST00000586416 501 ntBASIC1.72□□□□□ -2.13
CLK3P49761 AC096720.1-201ENST00000604441 183 ntBASIC1.72□□□□□ -2.13
CLK3P49761 MIR8055-201ENST00000610739 97 ntBASIC1.72□□□□□ -2.13
CLK3P49761 AL512310.12-203ENST00000640543 90 ntBASIC1.72□□□□□ -2.13
CLK3P49761 AC091304.10-201ENST00000641554 121 ntBASIC1.72□□□□□ -2.13
CLK3P49761 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CLK3P49761 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CLK3P49761 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
CLK3P49761 SNORA1.1-201ENST00000364671 133 ntBASIC1.71□□□□□ -2.14
CLK3P49761 SNORA32-201ENST00000384072 121 ntBASIC1.71□□□□□ -2.14
CLK3P49761 Y_RNA.659-201ENST00000515994 113 ntBASIC1.71□□□□□ -2.14
CLK3P49761 RNU6-162P-201ENST00000516228 103 ntBASIC1.71□□□□□ -2.14
CLK3P49761 Y_RNA.705-201ENST00000516862 110 ntBASIC1.71□□□□□ -2.14
CLK3P49761 MIR548Z-201ENST00000584743 97 ntBASIC1.71□□□□□ -2.14
CLK3P49761 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CLK3P49761 Y_RNA.219-201ENST00000364232 113 ntBASIC1.7□□□□□ -2.14
CLK3P49761 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
CLK3P49761 SNORD115-35-201ENST00000365122 82 ntBASIC1.7□□□□□ -2.14
CLK3P49761 Y_RNA.354-201ENST00000365448 111 ntBASIC1.7□□□□□ -2.14
CLK3P49761 RNU6-203P-201ENST00000384038 104 ntBASIC1.7□□□□□ -2.14
CLK3P49761 RNU6-972P-201ENST00000391208 107 ntBASIC1.7□□□□□ -2.14
CLK3P49761 SNORA11.2-201ENST00000408318 127 ntBASIC1.7□□□□□ -2.14
CLK3P49761 HMGN1P33-201ENST00000432945 451 ntBASIC1.7□□□□□ -2.14
CLK3P49761 HMGN2P23-201ENST00000456759 269 ntBASIC1.7□□□□□ -2.14
CLK3P49761 AC108729.3-201ENST00000513484 108 ntBASIC1.7□□□□□ -2.14
CLK3P49761 RNU7-43P-201ENST00000516554 64 ntBASIC1.7□□□□□ -2.14
CLK3P49761 RNU6-638P-201ENST00000516582 104 ntBASIC1.7□□□□□ -2.14
CLK3P49761 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
CLK3P49761 MIR3198-2-201ENST00000577868 80 ntBASIC1.7□□□□□ -2.14
CLK3P49761 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
CLK3P49761 RNU6-457P-201ENST00000363999 107 ntBASIC1.69□□□□□ -2.14
CLK3P49761 RNU6-887P-201ENST00000410660 100 ntBASIC1.69□□□□□ -2.14
CLK3P49761 BTF3P4-201ENST00000418852 495 ntBASIC1.69□□□□□ -2.14
CLK3P49761 snoU13.15-201ENST00000459407 104 ntBASIC1.69□□□□□ -2.14
CLK3P49761 snoU13.26-201ENST00000459452 105 ntBASIC1.69□□□□□ -2.14
CLK3P49761 IGLL4P-201ENST00000614590 133 ntBASIC1.69□□□□□ -2.14
CLK3P49761 Z97988.1-201ENST00000637697 135 ntBASIC1.69□□□□□ -2.14
CLK3P49761 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CLK3P49761 RNU6-1123P-201ENST00000362347 106 ntBASIC1.68□□□□□ -2.14
CLK3P49761 RNY1P1-201ENST00000364372 112 ntBASIC1.68□□□□□ -2.14
CLK3P49761 SNORD78.1-201ENST00000390866 65 ntBASIC1.68□□□□□ -2.14
CLK3P49761 SNORA40.18-201ENST00000391200 128 ntBASIC1.68□□□□□ -2.14
CLK3P49761 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.68□□□□□ -2.14
CLK3P49761 RNU7-2P-201ENST00000516096 62 ntBASIC1.68□□□□□ -2.14
CLK3P49761 RNU7-35P-201ENST00000517174 62 ntBASIC1.68□□□□□ -2.14
CLK3P49761 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.68□□□□□ -2.14
CLK3P49761 SNORA77B-201ENST00000578179 125 ntBASIC1.68□□□□□ -2.14
CLK3P49761 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 204.9 ms