Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 PMCHL1-202ENST00000423102 261 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 MTND4LP30-201ENST00000454092 297 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 RNU6-397P-201ENST00000516226 104 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 AC007485.1-201ENST00000616755 206 ntBASIC-0.29□□□□□ -2.46
COL18A1P39060 RNU4-90P-201ENST00000362773 141 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 RNU6-735P-201ENST00000410612 107 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 MTND5P34-201ENST00000568888 325 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 MIR378F-201ENST00000578143 78 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 MIR3681-201ENST00000580089 72 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 AC092794.1-201ENST00000612734 582 ntBASIC-0.3□□□□□ -2.46
COL18A1P39060 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.31□□□□□ -2.46
COL18A1P39060 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.31□□□□□ -2.46
COL18A1P39060 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.31□□□□□ -2.46
COL18A1P39060 MIR526A2-201ENST00000390198 65 ntBASIC-0.31□□□□□ -2.46
COL18A1P39060 RNY4P36-201ENST00000391116 96 ntBASIC-0.31□□□□□ -2.46
COL18A1P39060 SNORD4A-201ENST00000459174 72 ntBASIC-0.31□□□□□ -2.46
COL18A1P39060 AC141846.1-201ENST00000568348 142 ntBASIC-0.31□□□□□ -2.46
COL18A1P39060 AL133255.1-201ENST00000606374 441 ntBASIC-0.31□□□□□ -2.46
COL18A1P39060 U7.6-201ENST00000610841 64 ntBASIC-0.31□□□□□ -2.46
COL18A1P39060 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 SNORD116-29-201ENST00000384516 83 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 SNORA72.6-201ENST00000384520 129 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 RNU6-893P-201ENST00000458841 100 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 AP001328.1-201ENST00000528550 176 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 SNORD58B-201ENST00000607313 66 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 RNU6-10P-201ENST00000384036 107 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 SNORA20-201ENST00000384662 132 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL18A1P39060 SNORD126-201ENST00000459475 77 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 RNA5SP153-201ENST00000516498 76 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 AC040926.1-201ENST00000530195 238 ntBASIC-0.32□□□□□ -2.46
COL18A1P39060 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.33□□□□□ -2.46
COL18A1P39060 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.33□□□□□ -2.46
COL18A1P39060 RNU6-291P-201ENST00000384720 107 ntBASIC-0.33□□□□□ -2.46
COL18A1P39060 RNU6-507P-201ENST00000516045 100 ntBASIC-0.33□□□□□ -2.46
COL18A1P39060 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.33□□□□□ -2.46
COL18A1P39060 RNU6-180P-201ENST00000516697 61 ntBASIC-0.33□□□□□ -2.46
COL18A1P39060 AP003072.1-201ENST00000531740 145 ntBASIC-0.33□□□□□ -2.46
COL18A1P39060 AC006006.1-201ENST00000603082 144 ntBASIC-0.33□□□□□ -2.46
COL18A1P39060 AL596211.1-201ENST00000569873 2277 ntBASIC-0.33□□□□□ -2.46
COL18A1P39060 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 SNORD14C-201ENST00000365382 88 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 RNU6-756P-201ENST00000383997 107 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
COL18A1P39060 RNA5SP163-201ENST00000410304 99 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 AC098614.3-201ENST00000438957 440 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 RNU7-152P-201ENST00000458982 64 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 RNU7-45P-201ENST00000459460 63 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 FTX_2.1-201ENST00000618816 94 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 AL391099.1-201ENST00000624635 187 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 RNU4-58P-201ENST00000363192 141 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 SNORD115-46-201ENST00000390982 71 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 HSPE1P25-201ENST00000455484 251 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 RNU6-475P-201ENST00000516073 104 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 MIR4441-201ENST00000582623 100 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 MIR548AD-201ENST00000584780 82 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 AC006157.1-201ENST00000611750 366 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 MIR376A1-201ENST00000616574 68 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 AC104985.2-201ENST00000620598 500 ntBASIC-0.34□□□□□ -2.46
COL18A1P39060 RNU6-726P-201ENST00000364680 107 ntBASIC-0.35□□□□□ -2.47
COL18A1P39060 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.35□□□□□ -2.47
COL18A1P39060 SNORA53-201ENST00000391141 249 ntBASIC-0.35□□□□□ -2.47
COL18A1P39060 SNRPGP8-201ENST00000454064 226 ntBASIC-0.35□□□□□ -2.47
COL18A1P39060 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.35□□□□□ -2.47
COL18A1P39060 DEFB131E-201ENST00000532329 154 ntBASIC-0.35□□□□□ -2.47
COL18A1P39060 MIR4752-201ENST00000579672 72 ntBASIC-0.35□□□□□ -2.47
COL18A1P39060 MIR101-2-201ENST00000362195 79 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 RNY4P6-201ENST00000363667 96 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 SNORA63.7-201ENST00000365579 123 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 MIR548L-201ENST00000408303 86 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 RNU6-130P-201ENST00000411112 103 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 AC096949.1-201ENST00000412047 152 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 RNU6-976P-201ENST00000516086 111 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 SNORA27.4-201ENST00000516650 95 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 SNORA25.16-201ENST00000516741 121 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 RNU2-60P-201ENST00000517290 128 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL18A1P39060 snoU18.1-201ENST00000629629 71 ntBASIC-0.36□□□□□ -2.47
COL18A1P39060 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 302.9 ms