Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RNU6-460P-201ENST00000391158 108 ntBASIC1.45□□□□□ -2.18
CNGA1P29973 RNA5SP95-201ENST00000410319 137 ntBASIC1.45□□□□□ -2.18
CNGA1P29973 MIR3660-201ENST00000584845 100 ntBASIC1.45□□□□□ -2.18
CNGA1P29973 HSPE1P19-201ENST00000603327 295 ntBASIC1.45□□□□□ -2.18
CNGA1P29973 AC106800.4-201ENST00000614905 153 ntBASIC1.45□□□□□ -2.18
CNGA1P29973 SNORD113.3-201ENST00000364630 78 ntBASIC1.44□□□□□ -2.18
CNGA1P29973 Y_RNA.506-201ENST00000384494 102 ntBASIC1.44□□□□□ -2.18
CNGA1P29973 Y_RNA.540-201ENST00000384638 111 ntBASIC1.44□□□□□ -2.18
CNGA1P29973 MIR758-201ENST00000390227 88 ntBASIC1.44□□□□□ -2.18
CNGA1P29973 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.44□□□□□ -2.18
CNGA1P29973 RNU7-40P-201ENST00000516397 64 ntBASIC1.44□□□□□ -2.18
CNGA1P29973 Y_RNA.690-201ENST00000516603 95 ntBASIC1.44□□□□□ -2.18
CNGA1P29973 RNU4-16P-201ENST00000364737 141 ntBASIC1.43□□□□□ -2.18
CNGA1P29973 Y_RNA.354-201ENST00000365448 111 ntBASIC1.43□□□□□ -2.18
CNGA1P29973 RNU6-205P-201ENST00000390858 107 ntBASIC1.43□□□□□ -2.18
CNGA1P29973 Y_RNA.651-201ENST00000459380 103 ntBASIC1.43□□□□□ -2.18
CNGA1P29973 AC023827.1-201ENST00000569247 97 ntBASIC1.43□□□□□ -2.18
CNGA1P29973 RNU6-1062P-201ENST00000383908 107 ntBASIC1.42□□□□□ -2.18
CNGA1P29973 Y_RNA.488-201ENST00000384403 102 ntBASIC1.42□□□□□ -2.18
CNGA1P29973 SNORA2B-201ENST00000384583 137 ntBASIC1.42□□□□□ -2.18
CNGA1P29973 SNORD111-201ENST00000408139 94 ntBASIC1.42□□□□□ -2.18
CNGA1P29973 RNU6-113P-201ENST00000516653 101 ntBASIC1.42□□□□□ -2.18
CNGA1P29973 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.42□□□□□ -2.18
CNGA1P29973 AP001340.1-201ENST00000624405 217 ntBASIC1.42□□□□□ -2.18
CNGA1P29973 SNORA22.1-201ENST00000362701 134 ntBASIC1.41□□□□□ -2.18
CNGA1P29973 RNU6-508P-201ENST00000363231 103 ntBASIC1.41□□□□□ -2.18
CNGA1P29973 RNU6-309P-201ENST00000364573 106 ntBASIC1.41□□□□□ -2.18
CNGA1P29973 RNU6-915P-201ENST00000364943 103 ntBASIC1.41□□□□□ -2.18
CNGA1P29973 Y_RNA.420-201ENST00000384043 110 ntBASIC1.41□□□□□ -2.18
CNGA1P29973 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
CNGA1P29973 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CNGA1P29973 RNU6-690P-201ENST00000365242 106 ntBASIC1.4□□□□□ -2.19
CNGA1P29973 POLR2J4-204ENST00000418424 324 ntBASIC1.4□□□□□ -2.19
CNGA1P29973 RNU6-893P-201ENST00000458841 100 ntBASIC1.4□□□□□ -2.19
CNGA1P29973 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CNGA1P29973 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.39□□□□□ -2.19
CNGA1P29973 RNA5SP144-201ENST00000410846 116 ntBASIC1.39□□□□□ -2.19
CNGA1P29973 RNU7-62P-201ENST00000458856 62 ntBASIC1.39□□□□□ -2.19
CNGA1P29973 snoU13.2-201ENST00000459201 104 ntBASIC1.39□□□□□ -2.19
CNGA1P29973 RNU6-426P-201ENST00000516464 97 ntBASIC1.39□□□□□ -2.19
CNGA1P29973 RNU6-1223P-201ENST00000517124 104 ntBASIC1.39□□□□□ -2.19
CNGA1P29973 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.39□□□□□ -2.19
CNGA1P29973 MIR6740-201ENST00000618268 113 ntBASIC1.39□□□□□ -2.19
CNGA1P29973 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CNGA1P29973 MIR200A-201ENST00000384875 90 ntBASIC1.38□□□□□ -2.19
CNGA1P29973 SNORD12C-201ENST00000386307 89 ntBASIC1.38□□□□□ -2.19
CNGA1P29973 RNU6-240P-201ENST00000516098 97 ntBASIC1.38□□□□□ -2.19
CNGA1P29973 AP001328.1-201ENST00000528550 176 ntBASIC1.38□□□□□ -2.19
CNGA1P29973 Y_RNA.757-201ENST00000578934 114 ntBASIC1.38□□□□□ -2.19
CNGA1P29973 MIR6788-201ENST00000618842 66 ntBASIC1.38□□□□□ -2.19
CNGA1P29973 AC012676.2-201ENST00000619258 186 ntBASIC1.38□□□□□ -2.19
CNGA1P29973 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
CNGA1P29973 MIR588-201ENST00000384900 83 ntBASIC1.37□□□□□ -2.19
CNGA1P29973 MIR563-201ENST00000385080 79 ntBASIC1.37□□□□□ -2.19
CNGA1P29973 MIR548J-201ENST00000408833 112 ntBASIC1.37□□□□□ -2.19
CNGA1P29973 SNORD124-201ENST00000459577 104 ntBASIC1.37□□□□□ -2.19
CNGA1P29973 AC087343.1-201ENST00000477341 475 ntBASIC1.37□□□□□ -2.19
CNGA1P29973 RNU6-346P-201ENST00000516288 111 ntBASIC1.37□□□□□ -2.19
CNGA1P29973 MIR151B-201ENST00000584249 96 ntBASIC1.37□□□□□ -2.19
CNGA1P29973 MIR4295-201ENST00000585286 85 ntBASIC1.37□□□□□ -2.19
CNGA1P29973 RNU6-94P-201ENST00000607728 107 ntBASIC1.37□□□□□ -2.19
CNGA1P29973 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.37□□□□□ -2.19
CNGA1P29973 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
CNGA1P29973 Y_RNA.692-201ENST00000516627 105 ntBASIC1.36□□□□□ -2.19
CNGA1P29973 MIR3121-201ENST00000579680 77 ntBASIC1.36□□□□□ -2.19
CNGA1P29973 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.36□□□□□ -2.19
CNGA1P29973 PVT1_3.1-201ENST00000620853 95 ntBASIC1.36□□□□□ -2.19
CNGA1P29973 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
CNGA1P29973 SNORD114-26-201ENST00000363543 72 ntBASIC1.35□□□□□ -2.19
CNGA1P29973 RNU6-1258P-201ENST00000516911 111 ntBASIC1.35□□□□□ -2.19
CNGA1P29973 AC133485.4-201ENST00000561835 220 ntBASIC1.35□□□□□ -2.19
CNGA1P29973 AC138907.4-201ENST00000570107 226 ntBASIC1.35□□□□□ -2.19
CNGA1P29973 MIR4305-201ENST00000583252 102 ntBASIC1.35□□□□□ -2.19
CNGA1P29973 uc_338.6-201ENST00000613544 171 ntBASIC1.35□□□□□ -2.19
CNGA1P29973 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CNGA1P29973 SNORD114-24-201ENST00000365029 72 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 Y_RNA.343-201ENST00000365354 112 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 Y_RNA.568-201ENST00000384742 113 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 MIR598-201ENST00000384868 97 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 RNU6-1165P-201ENST00000410119 107 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 AL022718.1-201ENST00000412004 84 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 RNA5SP272-201ENST00000516095 111 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 RN7SKP179-201ENST00000516126 217 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 Y_RNA.703-201ENST00000516846 111 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 U7.2-201ENST00000607576 63 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 MIR6779-201ENST00000617283 64 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 MIR6767-201ENST00000637302 66 ntBASIC1.34□□□□□ -2.19
CNGA1P29973 AC010332.2-201ENST00000613083 1904 ntBASIC1.34□□□□□ -2.2
CNGA1P29973 Y_RNA.36-201ENST00000362602 112 ntBASIC1.33□□□□□ -2.2
CNGA1P29973 Y_RNA.171-201ENST00000363760 102 ntBASIC1.33□□□□□ -2.2
CNGA1P29973 RNU6-994P-201ENST00000410507 111 ntBASIC1.33□□□□□ -2.2
CNGA1P29973 FABP5P4-201ENST00000437203 171 ntBASIC1.33□□□□□ -2.2
CNGA1P29973 snoU13.21-201ENST00000459368 105 ntBASIC1.33□□□□□ -2.2
CNGA1P29973 AC108081.1-201ENST00000604358 221 ntBASIC1.33□□□□□ -2.2
CNGA1P29973 AC021443.1-201ENST00000604478 211 ntBASIC1.33□□□□□ -2.2
CNGA1P29973 RNA5SP325-201ENST00000363756 130 ntBASIC1.32□□□□□ -2.2
CNGA1P29973 Y_RNA.280-201ENST00000364765 112 ntBASIC1.32□□□□□ -2.2
CNGA1P29973 RNU6-342P-201ENST00000384521 104 ntBASIC1.32□□□□□ -2.2
CNGA1P29973 RPS29P28-201ENST00000446439 141 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms