Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SNORD115-43-201ENST00000365503 82 ntBASIC1.87□□□□□ -2.11
LMO1P25800 SNORD115-36-201ENST00000365629 82 ntBASIC1.87□□□□□ -2.11
LMO1P25800 SNORA2B-201ENST00000384583 137 ntBASIC1.87□□□□□ -2.11
LMO1P25800 Y_RNA.567-201ENST00000384736 106 ntBASIC1.87□□□□□ -2.11
LMO1P25800 MIR181B2-201ENST00000385004 89 ntBASIC1.87□□□□□ -2.11
LMO1P25800 RNU11-3P-201ENST00000391111 133 ntBASIC1.87□□□□□ -2.11
LMO1P25800 SNORD77B-201ENST00000391112 67 ntBASIC1.87□□□□□ -2.11
LMO1P25800 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.87□□□□□ -2.11
LMO1P25800 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.87□□□□□ -2.11
LMO1P25800 snoU13.23-201ENST00000458863 104 ntBASIC1.87□□□□□ -2.11
LMO1P25800 AL163195.1-201ENST00000496941 348 ntBASIC1.87□□□□□ -2.11
LMO1P25800 RNU6-557P-201ENST00000516842 110 ntBASIC1.87□□□□□ -2.11
LMO1P25800 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.87□□□□□ -2.11
LMO1P25800 MIR4448-201ENST00000584360 86 ntBASIC1.87□□□□□ -2.11
LMO1P25800 MIR5002-201ENST00000584713 97 ntBASIC1.87□□□□□ -2.11
LMO1P25800 AC096720.1-201ENST00000604441 183 ntBASIC1.87□□□□□ -2.11
LMO1P25800 MIR6717-201ENST00000622747 73 ntBASIC1.87□□□□□ -2.11
LMO1P25800 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.87□□□□□ -2.11
LMO1P25800 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.87□□□□□ -2.11
LMO1P25800 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.87□□□□□ -2.11
LMO1P25800 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
LMO1P25800 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.86□□□□□ -2.11
LMO1P25800 RNA5SP289-201ENST00000362332 137 ntBASIC1.86□□□□□ -2.11
LMO1P25800 RNU4-32P-201ENST00000363404 141 ntBASIC1.86□□□□□ -2.11
LMO1P25800 SNORA3A-201ENST00000364113 130 ntBASIC1.86□□□□□ -2.11
LMO1P25800 Y_RNA.242-201ENST00000364473 110 ntBASIC1.86□□□□□ -2.11
LMO1P25800 MIR548G-201ENST00000408442 89 ntBASIC1.86□□□□□ -2.11
LMO1P25800 SNORA11.4-201ENST00000408823 129 ntBASIC1.86□□□□□ -2.11
LMO1P25800 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LMO1P25800 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.86□□□□□ -2.11
LMO1P25800 SNORD4B-201ENST00000459083 72 ntBASIC1.86□□□□□ -2.11
LMO1P25800 AC125388.1-201ENST00000459631 156 ntBASIC1.86□□□□□ -2.11
LMO1P25800 SNORA31.25-201ENST00000517242 134 ntBASIC1.86□□□□□ -2.11
LMO1P25800 MIR4778-201ENST00000577635 80 ntBASIC1.86□□□□□ -2.11
LMO1P25800 MIR6873-201ENST00000622788 63 ntBASIC1.86□□□□□ -2.11
LMO1P25800 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LMO1P25800 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.85□□□□□ -2.11
LMO1P25800 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
LMO1P25800 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
LMO1P25800 SNORA63.2-201ENST00000362603 126 ntBASIC1.85□□□□□ -2.11
LMO1P25800 RNU6-862P-201ENST00000362804 105 ntBASIC1.85□□□□□ -2.11
LMO1P25800 SNORA24-201ENST00000384096 131 ntBASIC1.85□□□□□ -2.11
LMO1P25800 RNU6-1321P-201ENST00000390905 107 ntBASIC1.85□□□□□ -2.11
LMO1P25800 HMGN1P33-201ENST00000432945 451 ntBASIC1.85□□□□□ -2.11
LMO1P25800 RNU6-717P-201ENST00000459076 104 ntBASIC1.85□□□□□ -2.11
LMO1P25800 RNU6-634P-201ENST00000459134 106 ntBASIC1.85□□□□□ -2.11
LMO1P25800 SNORA31.10-201ENST00000516482 106 ntBASIC1.85□□□□□ -2.11
LMO1P25800 RNU1-142P-201ENST00000516682 145 ntBASIC1.85□□□□□ -2.11
LMO1P25800 MIR4529-201ENST00000578110 78 ntBASIC1.85□□□□□ -2.11
LMO1P25800 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
LMO1P25800 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LMO1P25800 RNU6-1084P-201ENST00000362498 107 ntBASIC1.84□□□□□ -2.11
LMO1P25800 RNA5SP138-201ENST00000365098 114 ntBASIC1.84□□□□□ -2.11
LMO1P25800 MIR221-201ENST00000385135 110 ntBASIC1.84□□□□□ -2.11
LMO1P25800 MIR524-201ENST00000385242 87 ntBASIC1.84□□□□□ -2.11
LMO1P25800 MIR802-201ENST00000390235 94 ntBASIC1.84□□□□□ -2.11
LMO1P25800 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
LMO1P25800 RNU6-482P-201ENST00000391068 107 ntBASIC1.84□□□□□ -2.11
LMO1P25800 SNORD90-201ENST00000391145 111 ntBASIC1.84□□□□□ -2.11
LMO1P25800 RN7SKP223-201ENST00000410582 62 ntBASIC1.84□□□□□ -2.11
LMO1P25800 HMGN2P3-201ENST00000433603 273 ntBASIC1.84□□□□□ -2.11
LMO1P25800 HMGN2P5-201ENST00000436882 273 ntBASIC1.84□□□□□ -2.11
LMO1P25800 MIR2113-201ENST00000459007 91 ntBASIC1.84□□□□□ -2.11
LMO1P25800 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.84□□□□□ -2.11
LMO1P25800 RNU7-35P-201ENST00000517174 62 ntBASIC1.84□□□□□ -2.11
LMO1P25800 MIR1273D-201ENST00000577266 86 ntBASIC1.84□□□□□ -2.11
LMO1P25800 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.84□□□□□ -2.11
LMO1P25800 AL020996.3-201ENST00000606617 222 ntBASIC1.84□□□□□ -2.11
LMO1P25800 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LMO1P25800 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
LMO1P25800 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
LMO1P25800 ICE2P2-201ENST00000483823 2787 ntBASIC1.84□□□□□ -2.12
LMO1P25800 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.83□□□□□ -2.12
LMO1P25800 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
LMO1P25800 RNU6-1094P-201ENST00000362416 104 ntBASIC1.83□□□□□ -2.12
LMO1P25800 SNORD115-31-201ENST00000365318 82 ntBASIC1.83□□□□□ -2.12
LMO1P25800 SNORA6-201ENST00000384033 151 ntBASIC1.83□□□□□ -2.12
LMO1P25800 RNU6-411P-201ENST00000384451 107 ntBASIC1.83□□□□□ -2.12
LMO1P25800 MIR9-2-201ENST00000384838 87 ntBASIC1.83□□□□□ -2.12
LMO1P25800 SNORD28B-201ENST00000390993 75 ntBASIC1.83□□□□□ -2.12
LMO1P25800 SNORA40.18-201ENST00000391200 128 ntBASIC1.83□□□□□ -2.12
LMO1P25800 MTND4LP19-201ENST00000403051 166 ntBASIC1.83□□□□□ -2.12
LMO1P25800 RNU4-83P-201ENST00000410863 133 ntBASIC1.83□□□□□ -2.12
LMO1P25800 RNU7-94P-201ENST00000459576 63 ntBASIC1.83□□□□□ -2.12
LMO1P25800 SNORD67.1-201ENST00000516618 108 ntBASIC1.83□□□□□ -2.12
LMO1P25800 RNU7-193P-201ENST00000516723 65 ntBASIC1.83□□□□□ -2.12
LMO1P25800 RNU6-448P-201ENST00000517052 107 ntBASIC1.83□□□□□ -2.12
LMO1P25800 AC015712.3-201ENST00000559380 164 ntBASIC1.83□□□□□ -2.12
LMO1P25800 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.83□□□□□ -2.12
LMO1P25800 U1.36-201ENST00000620684 176 ntBASIC1.83□□□□□ -2.12
LMO1P25800 MIR6132-201ENST00000622083 109 ntBASIC1.83□□□□□ -2.12
LMO1P25800 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LMO1P25800 RNU6-1019P-201ENST00000364424 107 ntBASIC1.82□□□□□ -2.12
LMO1P25800 Y_RNA.448-201ENST00000384185 108 ntBASIC1.82□□□□□ -2.12
LMO1P25800 RNU4-52P-201ENST00000384209 138 ntBASIC1.82□□□□□ -2.12
LMO1P25800 SNORA8-201ENST00000384574 139 ntBASIC1.82□□□□□ -2.12
LMO1P25800 MIR597-201ENST00000384968 97 ntBASIC1.82□□□□□ -2.12
LMO1P25800 SNORA48.1-201ENST00000390879 135 ntBASIC1.82□□□□□ -2.12
LMO1P25800 RNA5SP292-201ENST00000390974 118 ntBASIC1.82□□□□□ -2.12
LMO1P25800 RNA5SP109-201ENST00000391010 116 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 309.1 ms