Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
CDH1P12830 MIR3910-1-201ENST00000580936 111 ntBASIC1.05□□□□□ -2.24
CDH1P12830 MIR4264-201ENST00000583520 66 ntBASIC1.05□□□□□ -2.24
CDH1P12830 AL137067.1-201ENST00000615933 120 ntBASIC1.05□□□□□ -2.24
CDH1P12830 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.05□□□□□ -2.24
CDH1P12830 AC027335.2-201ENST00000624030 375 ntBASIC1.05□□□□□ -2.24
CDH1P12830 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
CDH1P12830 MIR377-201ENST00000362145 69 ntBASIC1.04□□□□□ -2.24
CDH1P12830 RNU6-647P-201ENST00000364243 107 ntBASIC1.04□□□□□ -2.24
CDH1P12830 RNU6-580P-201ENST00000365159 107 ntBASIC1.04□□□□□ -2.24
CDH1P12830 RNU6-81P-201ENST00000365608 104 ntBASIC1.04□□□□□ -2.24
CDH1P12830 SNORD12C-201ENST00000386307 89 ntBASIC1.04□□□□□ -2.24
CDH1P12830 SNORD12-201ENST00000391002 90 ntBASIC1.04□□□□□ -2.24
CDH1P12830 Y_RNA.617-201ENST00000410920 90 ntBASIC1.04□□□□□ -2.24
CDH1P12830 TMSB4XP3-201ENST00000445144 114 ntBASIC1.04□□□□□ -2.24
CDH1P12830 RNU6-1211P-201ENST00000459179 105 ntBASIC1.04□□□□□ -2.24
CDH1P12830 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
CDH1P12830 RNU7-123P-201ENST00000515911 60 ntBASIC1.04□□□□□ -2.24
CDH1P12830 AC019288.1-201ENST00000557918 224 ntBASIC1.04□□□□□ -2.24
CDH1P12830 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
CDH1P12830 AC021443.1-201ENST00000604478 211 ntBASIC1.04□□□□□ -2.24
CDH1P12830 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CDH1P12830 Y_RNA.171-201ENST00000363760 102 ntBASIC1.03□□□□□ -2.24
CDH1P12830 Y_RNA.218-201ENST00000364218 104 ntBASIC1.03□□□□□ -2.24
CDH1P12830 Y_RNA.330-201ENST00000365230 109 ntBASIC1.03□□□□□ -2.24
CDH1P12830 Y_RNA.354-201ENST00000365448 111 ntBASIC1.03□□□□□ -2.24
CDH1P12830 MIR539-201ENST00000365690 78 ntBASIC1.03□□□□□ -2.24
CDH1P12830 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CDH1P12830 RNU6-205P-201ENST00000390858 107 ntBASIC1.03□□□□□ -2.24
CDH1P12830 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.03□□□□□ -2.24
CDH1P12830 RNU6-893P-201ENST00000458841 100 ntBASIC1.03□□□□□ -2.24
CDH1P12830 RNU7-164P-201ENST00000459221 62 ntBASIC1.03□□□□□ -2.24
CDH1P12830 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.03□□□□□ -2.24
CDH1P12830 TRMT112P2-201ENST00000512910 132 ntBASIC1.03□□□□□ -2.24
CDH1P12830 RN7SKP19-201ENST00000516016 252 ntBASIC1.03□□□□□ -2.24
CDH1P12830 AC036111.3-201ENST00000526389 112 ntBASIC1.03□□□□□ -2.24
CDH1P12830 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
CDH1P12830 AP000753.3-201ENST00000604083 169 ntBASIC1.03□□□□□ -2.24
CDH1P12830 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CDH1P12830 RNU6-235P-201ENST00000362644 107 ntBASIC1.02□□□□□ -2.25
CDH1P12830 Y_RNA.168-201ENST00000363740 102 ntBASIC1.02□□□□□ -2.25
CDH1P12830 RNU6-392P-201ENST00000364926 101 ntBASIC1.02□□□□□ -2.25
CDH1P12830 Y_RNA.298-201ENST00000364960 107 ntBASIC1.02□□□□□ -2.25
CDH1P12830 RNU6-321P-201ENST00000410912 106 ntBASIC1.02□□□□□ -2.25
CDH1P12830 AL022718.1-201ENST00000412004 84 ntBASIC1.02□□□□□ -2.25
CDH1P12830 AL512326.2-201ENST00000426359 151 ntBASIC1.02□□□□□ -2.25
CDH1P12830 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
CDH1P12830 RNU7-90P-201ENST00000459216 62 ntBASIC1.02□□□□□ -2.25
CDH1P12830 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.02□□□□□ -2.25
CDH1P12830 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
CDH1P12830 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
CDH1P12830 MIR6740-201ENST00000618268 113 ntBASIC1.02□□□□□ -2.25
CDH1P12830 AC008163.1-202ENST00000636004 2889 ntBASIC1.02□□□□□ -2.25
CDH1P12830 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
CDH1P12830 SNORD115-2-201ENST00000362842 82 ntBASIC1.01□□□□□ -2.25
CDH1P12830 SNORD115-20-201ENST00000365099 82 ntBASIC1.01□□□□□ -2.25
CDH1P12830 Y_RNA.470-201ENST00000384307 117 ntBASIC1.01□□□□□ -2.25
CDH1P12830 MIR222-201ENST00000384992 110 ntBASIC1.01□□□□□ -2.25
CDH1P12830 snoU13.2-201ENST00000459201 104 ntBASIC1.01□□□□□ -2.25
CDH1P12830 AC087343.1-201ENST00000477341 475 ntBASIC1.01□□□□□ -2.25
CDH1P12830 AC113410.1-201ENST00000505029 247 ntBASIC1.01□□□□□ -2.25
CDH1P12830 RNU6-1053P-201ENST00000515930 101 ntBASIC1.01□□□□□ -2.25
CDH1P12830 RNY4P20-201ENST00000516678 93 ntBASIC1.01□□□□□ -2.25
CDH1P12830 AC004812.1-201ENST00000540773 146 ntBASIC1.01□□□□□ -2.25
CDH1P12830 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CDH1P12830 SNORD113.3-201ENST00000364630 78 ntBASIC1□□□□□ -2.25
CDH1P12830 RNU6-80P-201ENST00000384195 107 ntBASIC1□□□□□ -2.25
CDH1P12830 Y_RNA.531-201ENST00000384589 121 ntBASIC1□□□□□ -2.25
CDH1P12830 RNU6-959P-201ENST00000384671 107 ntBASIC1□□□□□ -2.25
CDH1P12830 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
CDH1P12830 MIR588-201ENST00000384900 83 ntBASIC1□□□□□ -2.25
CDH1P12830 MIR563-201ENST00000385080 79 ntBASIC1□□□□□ -2.25
CDH1P12830 AC063976.4-201ENST00000421971 163 ntBASIC1□□□□□ -2.25
CDH1P12830 RNU7-113P-201ENST00000459273 62 ntBASIC1□□□□□ -2.25
CDH1P12830 RNU6-781P-201ENST00000516377 101 ntBASIC1□□□□□ -2.25
CDH1P12830 RNU6-1234P-201ENST00000516877 103 ntBASIC1□□□□□ -2.25
CDH1P12830 AC023827.1-201ENST00000569247 97 ntBASIC1□□□□□ -2.25
CDH1P12830 uc_338.6-201ENST00000613544 171 ntBASIC1□□□□□ -2.25
CDH1P12830 AC106800.4-201ENST00000614905 153 ntBASIC1□□□□□ -2.25
CDH1P12830 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
CDH1P12830 Y_RNA.71-201ENST00000362892 104 ntBASIC0.99□□□□□ -2.25
CDH1P12830 SNORD58C-201ENST00000365223 64 ntBASIC0.99□□□□□ -2.25
CDH1P12830 RNU6-342P-201ENST00000384521 104 ntBASIC0.99□□□□□ -2.25
CDH1P12830 SNORA2B-201ENST00000384583 137 ntBASIC0.99□□□□□ -2.25
CDH1P12830 MIRLET7F2-201ENST00000385277 83 ntBASIC0.99□□□□□ -2.25
CDH1P12830 RNU4-61P-201ENST00000411243 107 ntBASIC0.99□□□□□ -2.25
CDH1P12830 RNU7-62P-201ENST00000458856 62 ntBASIC0.99□□□□□ -2.25
CDH1P12830 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CDH1P12830 Y_RNA.525-201ENST00000384570 113 ntBASIC0.98□□□□□ -2.25
CDH1P12830 RNU6-1104P-201ENST00000384723 104 ntBASIC0.98□□□□□ -2.25
CDH1P12830 SNORD111-201ENST00000408139 94 ntBASIC0.98□□□□□ -2.25
CDH1P12830 RNU7-107P-201ENST00000459121 61 ntBASIC0.98□□□□□ -2.25
CDH1P12830 RNU6-772P-201ENST00000516042 105 ntBASIC0.98□□□□□ -2.25
CDH1P12830 RNA5SP404-201ENST00000517118 132 ntBASIC0.98□□□□□ -2.25
CDH1P12830 AC022523.2-201ENST00000561045 150 ntBASIC0.98□□□□□ -2.25
CDH1P12830 MIR4781-201ENST00000585250 76 ntBASIC0.98□□□□□ -2.25
CDH1P12830 AC132825.6-201ENST00000638861 357 ntBASIC0.98□□□□□ -2.25
CDH1P12830 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
CDH1P12830 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
CDH1P12830 SNORD113-1-201ENST00000365321 69 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 249.3 ms