Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 RNU6-281P-201ENST00000384212 103 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 AF228730.4-201ENST00000421457 183 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 RNU7-195P-201ENST00000458793 62 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 MIR4775-201ENST00000581168 75 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 RNU6-924P-201ENST00000362926 108 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.93□□□□□ -2.56
COL6A3P12111 SNORD75.2-201ENST00000408784 58 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 MTATP6P19-201ENST00000413797 659 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 RNU7-167P-201ENST00000459160 62 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 AL133173.2-201ENST00000614270 90 ntBASIC-0.93□□□□□ -2.56
COL6A3P12111 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 RNU6-318P-201ENST00000384283 103 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 RNU6-517P-201ENST00000384362 110 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 MIR206-201ENST00000384872 86 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 MTCO3P39-201ENST00000514812 518 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 RNU7-35P-201ENST00000517174 62 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 AC022616.6-201ENST00000520479 119 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 AC022878.1-201ENST00000530684 149 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 AC005771.1-201ENST00000585581 349 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 U2.17-201ENST00000611454 95 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 RNU6-533P-201ENST00000384144 107 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 SNORD115-47-201ENST00000391226 86 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 CHEK2P4-201ENST00000450340 246 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 MTCO3P42-201ENST00000509488 518 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.94□□□□□ -2.56
COL6A3P12111 MIR376A2-201ENST00000636782 80 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 RNU6-550P-201ENST00000391057 101 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 RNU2-66P-201ENST00000410650 161 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 FGF7P6-202ENST00000451282 293 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 MTATP6P15-201ENST00000527233 835 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 MIR5692C1-201ENST00000585309 91 ntBASIC-0.94□□□□□ -2.56
COL6A3P12111 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.95□□□□□ -2.56
COL6A3P12111 RNU6-790P-201ENST00000384479 105 ntBASIC-0.95□□□□□ -2.56
COL6A3P12111 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.95□□□□□ -2.56
COL6A3P12111 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.95□□□□□ -2.56
COL6A3P12111 MTND1P34-201ENST00000438556 671 ntBASIC-0.95□□□□□ -2.56
COL6A3P12111 RNU7-113P-201ENST00000459273 62 ntBASIC-0.95□□□□□ -2.56
COL6A3P12111 AC018638.8-201ENST00000588755 281 ntBASIC-0.95□□□□□ -2.56
COL6A3P12111 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.95□□□□□ -2.56
COL6A3P12111 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.95□□□□□ -2.56
COL6A3P12111 RNU6-397P-201ENST00000516226 104 ntBASIC-0.95□□□□□ -2.56
COL6A3P12111 SCOCP1-201ENST00000554676 349 ntBASIC-0.95□□□□□ -2.56
COL6A3P12111 MTATP6P24-201ENST00000576835 677 ntBASIC-0.95□□□□□ -2.56
COL6A3P12111 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 RNU6-102P-201ENST00000384485 104 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 SNORD12B-201ENST00000410433 91 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 FGF7P4-201ENST00000509595 295 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 AC009878.1-201ENST00000621819 340 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 SNORD50.1-201ENST00000362987 71 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 RNU2-61P-201ENST00000411069 191 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 SEPT14P4-201ENST00000513445 186 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 AC006504.6-201ENST00000590142 199 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 RNU6-792P-201ENST00000363490 107 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 RNU6-899P-201ENST00000363947 107 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 RNU6-809P-201ENST00000384461 107 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 MIR519A1-201ENST00000385257 85 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 SNORA53-201ENST00000391141 249 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 SNORD11-201ENST00000459124 84 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 RNU6-470P-201ENST00000515954 104 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.96□□□□□ -2.56
COL6A3P12111 MIR548AM-201ENST00000584298 74 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 AC016911.1-201ENST00000613297 452 ntBASIC-0.96□□□□□ -2.56
COL6A3P12111 RNU4-10P-201ENST00000364383 140 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 SNORD115-20-201ENST00000365099 82 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 RNU6-74P-201ENST00000384235 107 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 RNU6-159P-201ENST00000391080 106 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 AC090616.4-201ENST00000448026 115 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 snoU109.3-201ENST00000459477 145 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 RNU6-559P-201ENST00000516151 98 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 MIR4464-201ENST00000580818 92 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 AC133104.2-201ENST00000615272 193 ntBASIC-0.97□□□□□ -2.56
COL6A3P12111 MIR548E-201ENST00000408287 88 ntBASIC-0.97□□□□□ -2.57
COL6A3P12111 AL353193.1-201ENST00000421444 268 ntBASIC-0.97□□□□□ -2.57
COL6A3P12111 RNU6-365P-201ENST00000517113 106 ntBASIC-0.97□□□□□ -2.57
COL6A3P12111 AL118558.2-201ENST00000556294 238 ntBASIC-0.97□□□□□ -2.57
COL6A3P12111 AC005357.1-201ENST00000588399 301 ntBASIC-0.97□□□□□ -2.57
COL6A3P12111 AC092954.2-201ENST00000609103 430 ntBASIC-0.97□□□□□ -2.57
COL6A3P12111 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.98□□□□□ -2.57
COL6A3P12111 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms