Protein–RNA interactions for Protein: P09012

SNRPA, U1 small nuclear ribonucleoprotein A, humanhuman

Known RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPAP09012 MIR1302-11-201ENST00000408051 138 ntBASIC-0.33□□□□□ -2.46
SNRPAP09012 MIR1302-9-201ENST00000408365 138 ntBASIC-0.33□□□□□ -2.46
SNRPAP09012 MIR1302-10-201ENST00000408734 138 ntBASIC-0.33□□□□□ -2.46
SNRPAP09012 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.33□□□□□ -2.46
SNRPAP09012 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
SNRPAP09012 MIR5197-201ENST00000583721 112 ntBASIC-0.33□□□□□ -2.46
SNRPAP09012 MIR1302-2-201ENST00000607096 138 ntBASIC-0.33□□□□□ -2.46
SNRPAP09012 AC090574.1-201ENST00000623186 233 ntBASIC-0.33□□□□□ -2.46
SNRPAP09012 SNORA18.1-201ENST00000363418 128 ntBASIC-0.34□□□□□ -2.46
SNRPAP09012 SNORD115-24-201ENST00000363528 82 ntBASIC-0.34□□□□□ -2.46
SNRPAP09012 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.34□□□□□ -2.46
SNRPAP09012 MIR548L-201ENST00000408303 86 ntBASIC-0.34□□□□□ -2.46
SNRPAP09012 AL731563.1-201ENST00000442202 214 ntBASIC-0.34□□□□□ -2.46
SNRPAP09012 SNRPGP8-201ENST00000454064 226 ntBASIC-0.34□□□□□ -2.46
SNRPAP09012 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.34□□□□□ -2.46
SNRPAP09012 MTND5P32-201ENST00000560711 1802 ntBASIC-0.34□□□□□ -2.46
SNRPAP09012 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 RNU6-161P-201ENST00000363051 106 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 RNU6-211P-201ENST00000384047 107 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 SNORA53-201ENST00000391141 249 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 RPL21P38-201ENST00000418090 167 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 RNU7-80P-201ENST00000459562 61 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 RNU6-475P-201ENST00000516073 104 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 RNU6-320P-201ENST00000516511 106 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 RNU6-453P-201ENST00000516819 85 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 RNU2-60P-201ENST00000517290 128 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.35□□□□□ -2.47
SNRPAP09012 AC037487.3-201ENST00000606668 112 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 AL442067.1-201ENST00000613261 223 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 AC021613.1-201ENST00000623880 111 ntBASIC-0.35□□□□□ -2.47
SNRPAP09012 RNA5SP133-201ENST00000363368 119 ntBASIC-0.36□□□□□ -2.47
SNRPAP09012 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.36□□□□□ -2.47
SNRPAP09012 RNU6-726P-201ENST00000364680 107 ntBASIC-0.36□□□□□ -2.47
SNRPAP09012 SNORA27.4-201ENST00000516650 95 ntBASIC-0.36□□□□□ -2.47
SNRPAP09012 AC097639.2-201ENST00000603159 172 ntBASIC-0.36□□□□□ -2.47
SNRPAP09012 MIR6514-201ENST00000622549 70 ntBASIC-0.36□□□□□ -2.47
SNRPAP09012 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 RNU6-806P-201ENST00000365147 105 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 MIR626-201ENST00000385032 94 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 RNU6-823P-201ENST00000391042 103 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 AL606845.1-201ENST00000404881 255 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 MTND4P19-201ENST00000446659 478 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 RNU7-104P-201ENST00000459398 79 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 RNA5SP153-201ENST00000516498 76 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 RNU6-180P-201ENST00000516697 61 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 AP003072.1-201ENST00000531740 145 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 MIR548AD-201ENST00000584780 82 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 U6.109-201ENST00000636749 87 ntBASIC-0.37□□□□□ -2.47
SNRPAP09012 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 RNU6-702P-201ENST00000364982 107 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 RNU6-326P-201ENST00000365480 107 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 RNU6-46P-201ENST00000383860 107 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 RBMX2P4-201ENST00000441256 376 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 RNU7-161P-201ENST00000517289 62 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 IGLVI-20-201ENST00000519296 130 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 MIR5706-201ENST00000579841 80 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 MIR3925-201ENST00000584674 77 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 AC011921.3-201ENST00000605540 361 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 AC139792.2-201ENST00000624218 587 ntBASIC-0.38□□□□□ -2.47
SNRPAP09012 MIR101-2-201ENST00000362195 79 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 SNORD114-31-201ENST00000363219 75 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 RNA5SP275-201ENST00000363936 118 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 SNORA63.7-201ENST00000365579 123 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
SNRPAP09012 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 RNU2-55P-201ENST00000411146 174 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 FGF7P4-201ENST00000509595 295 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 RNU7-70P-201ENST00000516941 66 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 MIR5688-201ENST00000580619 83 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 U7.6-201ENST00000610841 64 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 AL162376.1-201ENST00000624117 175 ntBASIC-0.39□□□□□ -2.47
SNRPAP09012 MIR369-201ENST00000362155 70 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 RNU4-58P-201ENST00000363192 141 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.4□□□□□ -2.47
SNRPAP09012 MTND4LP30-201ENST00000454092 297 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 MTND5P22-201ENST00000458380 195 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 RNU7-79P-201ENST00000516082 62 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 RNU6-561P-201ENST00000516222 102 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 SNORA40.15-201ENST00000516884 107 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.4□□□□□ -2.47
SNRPAP09012 MIR4645-201ENST00000583158 77 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 MIR4677-201ENST00000584153 80 ntBASIC-0.4□□□□□ -2.47
SNRPAP09012 MIR3666-201ENST00000607845 111 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms