Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 RNU6-785P-201ENST00000411324 104 ntBASIC2.28□□□□□ -2.04
KRT1P04264 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.28□□□□□ -2.04
KRT1P04264 SPINT5P-201ENST00000448174 155 ntBASIC2.28□□□□□ -2.04
KRT1P04264 AC114801.3-201ENST00000510231 177 ntBASIC2.28□□□□□ -2.04
KRT1P04264 RNU7-12P-201ENST00000516030 62 ntBASIC2.28□□□□□ -2.04
KRT1P04264 RNU7-35P-201ENST00000517174 62 ntBASIC2.28□□□□□ -2.04
KRT1P04264 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.28□□□□□ -2.04
KRT1P04264 AL513043.2-201ENST00000573941 143 ntBASIC2.28□□□□□ -2.04
KRT1P04264 MIR4769-201ENST00000584126 77 ntBASIC2.28□□□□□ -2.04
KRT1P04264 AC022202.1-201ENST00000613515 211 ntBASIC2.28□□□□□ -2.04
KRT1P04264 U6.90-201ENST00000614007 104 ntBASIC2.28□□□□□ -2.04
KRT1P04264 AC243994.1-201ENST00000618627 109 ntBASIC2.28□□□□□ -2.04
KRT1P04264 U6.70-201ENST00000620287 104 ntBASIC2.28□□□□□ -2.04
KRT1P04264 MIR6132-201ENST00000622083 109 ntBASIC2.28□□□□□ -2.04
KRT1P04264 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.27□□□□□ -2.05
KRT1P04264 RNU6-1094P-201ENST00000362416 104 ntBASIC2.27□□□□□ -2.05
KRT1P04264 RNU6-1019P-201ENST00000364424 107 ntBASIC2.27□□□□□ -2.05
KRT1P04264 Y_RNA.354-201ENST00000365448 111 ntBASIC2.27□□□□□ -2.05
KRT1P04264 MIR516B2-201ENST00000385190 85 ntBASIC2.27□□□□□ -2.05
KRT1P04264 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
KRT1P04264 AC245047.7-201ENST00000440265 293 ntBASIC2.27□□□□□ -2.05
KRT1P04264 RNA5SP233-201ENST00000459153 113 ntBASIC2.27□□□□□ -2.05
KRT1P04264 SNORA31.10-201ENST00000516482 106 ntBASIC2.27□□□□□ -2.05
KRT1P04264 RNA5SP168-201ENST00000516642 112 ntBASIC2.27□□□□□ -2.05
KRT1P04264 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.27□□□□□ -2.05
KRT1P04264 MIR7843-201ENST00000622274 79 ntBASIC2.27□□□□□ -2.05
KRT1P04264 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.26□□□□□ -2.05
KRT1P04264 RNU6-913P-201ENST00000390913 95 ntBASIC2.26□□□□□ -2.05
KRT1P04264 RNU6-1307P-201ENST00000391012 103 ntBASIC2.26□□□□□ -2.05
KRT1P04264 RNU6-129P-201ENST00000391022 107 ntBASIC2.26□□□□□ -2.05
KRT1P04264 AC090255.1-201ENST00000495779 349 ntBASIC2.26□□□□□ -2.05
KRT1P04264 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.26□□□□□ -2.05
KRT1P04264 AC005786.1-201ENST00000588553 154 ntBASIC2.26□□□□□ -2.05
KRT1P04264 AC069114.2-201ENST00000604699 304 ntBASIC2.26□□□□□ -2.05
KRT1P04264 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRT1P04264 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRT1P04264 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.25□□□□□ -2.05
KRT1P04264 Y_RNA.168-201ENST00000363740 102 ntBASIC2.25□□□□□ -2.05
KRT1P04264 Y_RNA.173-201ENST00000363776 113 ntBASIC2.25□□□□□ -2.05
KRT1P04264 Y_RNA.448-201ENST00000384185 108 ntBASIC2.25□□□□□ -2.05
KRT1P04264 RNU6-342P-201ENST00000384521 104 ntBASIC2.25□□□□□ -2.05
KRT1P04264 MIR518A2-201ENST00000384966 87 ntBASIC2.25□□□□□ -2.05
KRT1P04264 MIR29C-201ENST00000385231 88 ntBASIC2.25□□□□□ -2.05
KRT1P04264 MIR1236-201ENST00000408340 102 ntBASIC2.25□□□□□ -2.05
KRT1P04264 AL356379.1-201ENST00000414105 126 ntBASIC2.25□□□□□ -2.05
KRT1P04264 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
KRT1P04264 MIR4524B-201ENST00000581569 115 ntBASIC2.25□□□□□ -2.05
KRT1P04264 AC012676.2-201ENST00000619258 186 ntBASIC2.25□□□□□ -2.05
KRT1P04264 SNORD115-3-201ENST00000363100 82 ntBASIC2.24□□□□□ -2.05
KRT1P04264 Y_RNA.98-201ENST00000363109 102 ntBASIC2.24□□□□□ -2.05
KRT1P04264 SNORD114-10-201ENST00000363409 72 ntBASIC2.24□□□□□ -2.05
KRT1P04264 RNA5SP138-201ENST00000365098 114 ntBASIC2.24□□□□□ -2.05
KRT1P04264 Y_RNA.537-201ENST00000384626 109 ntBASIC2.24□□□□□ -2.05
KRT1P04264 MIR181B2-201ENST00000385004 89 ntBASIC2.24□□□□□ -2.05
KRT1P04264 RNU6-519P-201ENST00000410590 108 ntBASIC2.24□□□□□ -2.05
KRT1P04264 snoU13.16-201ENST00000459350 104 ntBASIC2.24□□□□□ -2.05
KRT1P04264 MTND5P40-201ENST00000559945 246 ntBASIC2.24□□□□□ -2.05
KRT1P04264 MIR548AR-201ENST00000582191 57 ntBASIC2.24□□□□□ -2.05
KRT1P04264 RNA5SP276-201ENST00000362580 94 ntBASIC2.23□□□□□ -2.05
KRT1P04264 RNU6-1086P-201ENST00000410930 100 ntBASIC2.23□□□□□ -2.05
KRT1P04264 RNU6-602P-201ENST00000411155 105 ntBASIC2.23□□□□□ -2.05
KRT1P04264 RNA5SP508-201ENST00000411327 119 ntBASIC2.23□□□□□ -2.05
KRT1P04264 RPL23AP6-201ENST00000446637 472 ntBASIC2.23□□□□□ -2.05
KRT1P04264 SCARNA16.3-201ENST00000516595 184 ntBASIC2.23□□□□□ -2.05
KRT1P04264 SNORD67.1-201ENST00000516618 108 ntBASIC2.23□□□□□ -2.05
KRT1P04264 SNORD53-201ENST00000579969 78 ntBASIC2.23□□□□□ -2.05
KRT1P04264 FAM106DP-201ENST00000586416 501 ntBASIC2.23□□□□□ -2.05
KRT1P04264 MIR8055-201ENST00000610739 97 ntBASIC2.23□□□□□ -2.05
KRT1P04264 AL627230.6-201ENST00000611129 280 ntBASIC2.23□□□□□ -2.05
KRT1P04264 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
KRT1P04264 RNU6-1321P-201ENST00000390905 107 ntBASIC2.22□□□□□ -2.05
KRT1P04264 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
KRT1P04264 RNU6-380P-201ENST00000410207 107 ntBASIC2.22□□□□□ -2.05
KRT1P04264 RNU4-53P-201ENST00000410828 140 ntBASIC2.22□□□□□ -2.05
KRT1P04264 HSPE1P9-201ENST00000440046 311 ntBASIC2.22□□□□□ -2.05
KRT1P04264 RNU7-48P-201ENST00000458875 63 ntBASIC2.22□□□□□ -2.05
KRT1P04264 SNORD123-201ENST00000459473 70 ntBASIC2.22□□□□□ -2.05
KRT1P04264 RNU7-79P-201ENST00000516082 62 ntBASIC2.22□□□□□ -2.05
KRT1P04264 RNU1-41P-201ENST00000516161 162 ntBASIC2.22□□□□□ -2.05
KRT1P04264 SNORA25.13-201ENST00000516395 103 ntBASIC2.22□□□□□ -2.05
KRT1P04264 RNU1-48P-201ENST00000516400 162 ntBASIC2.22□□□□□ -2.05
KRT1P04264 AC022513.1-201ENST00000624512 117 ntBASIC2.22□□□□□ -2.05
KRT1P04264 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KRT1P04264 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
KRT1P04264 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRT1P04264 MIR504-201ENST00000385065 83 ntBASIC2.21□□□□□ -2.06
KRT1P04264 MIR676-201ENST00000390702 67 ntBASIC2.21□□□□□ -2.06
KRT1P04264 RNA5SP450-201ENST00000411206 102 ntBASIC2.21□□□□□ -2.06
KRT1P04264 HMGN1P33-201ENST00000432945 451 ntBASIC2.21□□□□□ -2.06
KRT1P04264 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
KRT1P04264 MIR5002-201ENST00000584713 97 ntBASIC2.21□□□□□ -2.06
KRT1P04264 AL359851.1-201ENST00000569460 4997 ntBASIC2.21□□□□□ -2.06
KRT1P04264 AP000648.3-201ENST00000623539 4507 ntBASIC2.21□□□□□ -2.06
KRT1P04264 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.21□□□□□ -2.06
KRT1P04264 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
KRT1P04264 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
KRT1P04264 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
KRT1P04264 RNU6-1031P-201ENST00000384773 107 ntBASIC2.2□□□□□ -2.06
KRT1P04264 SNORD28B-201ENST00000390993 75 ntBASIC2.2□□□□□ -2.06
KRT1P04264 SNORA40.18-201ENST00000391200 128 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms