Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 MIR643-201ENST00000385267 97 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 RNU6-127P-201ENST00000390897 107 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 AL365205.2-201ENST00000594586 68 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 MIR6504-201ENST00000613520 61 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 U2.14-201ENST00000615943 113 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 AC244669.1-204ENST00000621564 178 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC-0.05□□□□□ -2.42
RAB3DO95716 AC091304.10-201ENST00000641554 121 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 RNU6-728P-201ENST00000365375 104 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 MIR760-201ENST00000390220 80 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 RNU6ATAC15P-201ENST00000408279 121 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 RNU6-985P-201ENST00000410182 104 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 RNU7-70P-201ENST00000516941 66 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.06□□□□□ -2.42
RAB3DO95716 MIR4452-201ENST00000583004 71 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 MIR4768-201ENST00000585270 74 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.06□□□□□ -2.42
RAB3DO95716 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.07□□□□□ -2.42
RAB3DO95716 SNORA79-201ENST00000408376 140 ntBASIC-0.07□□□□□ -2.42
RAB3DO95716 AL117351.2-201ENST00000513571 157 ntBASIC-0.07□□□□□ -2.42
RAB3DO95716 SCARNA15-202ENST00000516881 127 ntBASIC-0.07□□□□□ -2.42
RAB3DO95716 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.07□□□□□ -2.42
RAB3DO95716 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.07□□□□□ -2.42
RAB3DO95716 MIR4282-201ENST00000583613 67 ntBASIC-0.07□□□□□ -2.42
RAB3DO95716 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
RAB3DO95716 MIR4639-201ENST00000584938 69 ntBASIC-0.07□□□□□ -2.42
RAB3DO95716 MIR499B-201ENST00000636498 73 ntBASIC-0.07□□□□□ -2.42
RAB3DO95716 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
RAB3DO95716 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.08□□□□□ -2.42
RAB3DO95716 SNORA63.5-201ENST00000363548 123 ntBASIC-0.08□□□□□ -2.42
RAB3DO95716 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.08□□□□□ -2.42
RAB3DO95716 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.08□□□□□ -2.42
RAB3DO95716 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.08□□□□□ -2.42
RAB3DO95716 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.08□□□□□ -2.42
RAB3DO95716 MTND4LP11-201ENST00000422184 280 ntBASIC-0.08□□□□□ -2.42
RAB3DO95716 RNU6-531P-201ENST00000516694 104 ntBASIC-0.08□□□□□ -2.42
RAB3DO95716 RNU6-135P-201ENST00000516769 101 ntBASIC-0.08□□□□□ -2.42
RAB3DO95716 RNU6-978P-201ENST00000364371 103 ntBASIC-0.09□□□□□ -2.42
RAB3DO95716 RNU4-43P-201ENST00000410628 137 ntBASIC-0.09□□□□□ -2.42
RAB3DO95716 AL121914.1-201ENST00000450188 156 ntBASIC-0.09□□□□□ -2.42
RAB3DO95716 RNU7-79P-201ENST00000516082 62 ntBASIC-0.09□□□□□ -2.42
RAB3DO95716 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.09□□□□□ -2.42
RAB3DO95716 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.09□□□□□ -2.42
RAB3DO95716 DEFB131E-201ENST00000532329 154 ntBASIC-0.09□□□□□ -2.42
RAB3DO95716 MIR4643-201ENST00000577473 78 ntBASIC-0.09□□□□□ -2.42
RAB3DO95716 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.09□□□□□ -2.42
RAB3DO95716 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.09□□□□□ -2.42
RAB3DO95716 RNA5SP325-201ENST00000363756 130 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 RNU4-17P-201ENST00000365598 141 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 RNU6-716P-201ENST00000365621 103 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 MIR593-201ENST00000384856 100 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 MT-TW-201ENST00000387382 68 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
RAB3DO95716 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 RPL39P34-201ENST00000477141 156 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 SNORD116-25-201ENST00000516517 92 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 MIR4514-201ENST00000581410 57 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 RNU1-29P-201ENST00000606574 126 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.1□□□□□ -2.43
RAB3DO95716 RNA5SP128-201ENST00000365305 116 ntBASIC-0.11□□□□□ -2.43
RAB3DO95716 SNORA33.2-201ENST00000365413 134 ntBASIC-0.11□□□□□ -2.43
RAB3DO95716 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.11□□□□□ -2.43
RAB3DO95716 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.11□□□□□ -2.43
RAB3DO95716 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.11□□□□□ -2.43
RAB3DO95716 AL603825.1-201ENST00000438481 80 ntBASIC-0.11□□□□□ -2.43
RAB3DO95716 RNY3P16-201ENST00000516338 101 ntBASIC-0.11□□□□□ -2.43
RAB3DO95716 SNORA62.5-201ENST00000516634 120 ntBASIC-0.11□□□□□ -2.43
RAB3DO95716 MIR378D2-201ENST00000580636 98 ntBASIC-0.11□□□□□ -2.43
RAB3DO95716 AL356055.1-201ENST00000602528 446 ntBASIC-0.11□□□□□ -2.43
RAB3DO95716 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 RNA5SP133-201ENST00000363368 119 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 SNORA2A-201ENST00000383885 135 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 RNU6-42P-201ENST00000384165 107 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 RNU6-713P-201ENST00000384761 107 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 MIR145-201ENST00000384967 88 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 MIR610-201ENST00000385139 96 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
RAB3DO95716 MTATP8P1-201ENST00000467115 207 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 RNU6-848P-201ENST00000515948 107 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 RNU6-617P-201ENST00000516147 107 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 RNU6-473P-201ENST00000516164 107 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 AC141557.1-201ENST00000540982 400 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 AL078603.1-201ENST00000603824 313 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 AC011921.3-201ENST00000605540 361 ntBASIC-0.12□□□□□ -2.43
RAB3DO95716 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.12□□□□□ -2.43
RAB3DO95716 MIR335-201ENST00000362173 94 ntBASIC-0.13□□□□□ -2.43
RAB3DO95716 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.13□□□□□ -2.43
RAB3DO95716 RNU6-238P-201ENST00000363313 106 ntBASIC-0.13□□□□□ -2.43
RAB3DO95716 RNU4-67P-201ENST00000364569 141 ntBASIC-0.13□□□□□ -2.43
RAB3DO95716 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms