Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RN7SKP88-201ENST00000516847 250 ntBASIC2.06□□□□□ -2.08
PRPF40AO75400 AC015712.3-201ENST00000559380 164 ntBASIC2.06□□□□□ -2.08
PRPF40AO75400 PRELID3BP2-201ENST00000605362 201 ntBASIC2.06□□□□□ -2.08
PRPF40AO75400 7SK.8-201ENST00000612110 250 ntBASIC2.06□□□□□ -2.08
PRPF40AO75400 7SK.11-201ENST00000615477 250 ntBASIC2.06□□□□□ -2.08
PRPF40AO75400 7SK.13-201ENST00000622040 250 ntBASIC2.06□□□□□ -2.08
PRPF40AO75400 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.06□□□□□ -2.08
PRPF40AO75400 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PRPF40AO75400 RNA5SP363-201ENST00000365072 115 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 RNA5SP237-201ENST00000410414 113 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 RPS27P16-201ENST00000425758 201 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 AC003989.2-201ENST00000440224 169 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 RPL39P34-201ENST00000477141 156 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 RPS29P11-201ENST00000496507 171 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 AC108210.2-201ENST00000503681 201 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 AP000942.3-201ENST00000603702 160 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 AP000753.3-201ENST00000604083 169 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 AC087741.2-201ENST00000619415 172 ntBASIC2.05□□□□□ -2.08
PRPF40AO75400 RNA5SP432-201ENST00000362480 116 ntBASIC2.04□□□□□ -2.08
PRPF40AO75400 RNA5SP264-201ENST00000363115 107 ntBASIC2.04□□□□□ -2.08
PRPF40AO75400 Y_RNA.309-201ENST00000365046 111 ntBASIC2.04□□□□□ -2.08
PRPF40AO75400 RNU6-342P-201ENST00000384521 104 ntBASIC2.04□□□□□ -2.08
PRPF40AO75400 snoU13.25-201ENST00000458945 104 ntBASIC2.04□□□□□ -2.08
PRPF40AO75400 RNU6-165P-201ENST00000517170 99 ntBASIC2.04□□□□□ -2.08
PRPF40AO75400 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.04□□□□□ -2.08
PRPF40AO75400 MIR3618-201ENST00000580330 88 ntBASIC2.04□□□□□ -2.08
PRPF40AO75400 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
PRPF40AO75400 RNU6-755P-201ENST00000364400 103 ntBASIC2.03□□□□□ -2.08
PRPF40AO75400 RNU6-1237P-201ENST00000384777 107 ntBASIC2.03□□□□□ -2.08
PRPF40AO75400 MIR1302-7-201ENST00000408841 72 ntBASIC2.03□□□□□ -2.08
PRPF40AO75400 RNU11-2P-201ENST00000516898 142 ntBASIC2.03□□□□□ -2.08
PRPF40AO75400 MIR6845-201ENST00000613182 61 ntBASIC2.03□□□□□ -2.08
PRPF40AO75400 AL162726.3-218ENST00000636401 95 ntBASIC2.03□□□□□ -2.08
PRPF40AO75400 SNORD115-19-201ENST00000363098 82 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 Y_RNA.116-201ENST00000363292 103 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 SNORD115-18-201ENST00000363293 82 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 SNORD115-17-201ENST00000364612 82 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 Y_RNA.507-201ENST00000384500 99 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 MIR1912-201ENST00000410389 80 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 RPL39P25-201ENST00000449384 154 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 RNU6-548P-201ENST00000517083 115 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 RNU6-902P-201ENST00000517212 91 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 MIR4264-201ENST00000583520 66 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 uc_338.28-201ENST00000612082 187 ntBASIC2.02□□□□□ -2.09
PRPF40AO75400 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PRPF40AO75400 RNU6-153P-201ENST00000364422 104 ntBASIC2.01□□□□□ -2.09
PRPF40AO75400 RNU6-816P-201ENST00000390914 107 ntBASIC2.01□□□□□ -2.09
PRPF40AO75400 RNU6-1268P-201ENST00000391214 107 ntBASIC2.01□□□□□ -2.09
PRPF40AO75400 RNU6-1239P-201ENST00000391310 107 ntBASIC2.01□□□□□ -2.09
PRPF40AO75400 SNORA26.9-201ENST00000391322 122 ntBASIC2.01□□□□□ -2.09
PRPF40AO75400 AC068339.1-201ENST00000526965 141 ntBASIC2.01□□□□□ -2.09
PRPF40AO75400 MIR4769-201ENST00000584126 77 ntBASIC2.01□□□□□ -2.09
PRPF40AO75400 U8.6-201ENST00000364939 135 ntBASIC2□□□□□ -2.09
PRPF40AO75400 RNU6-1014P-201ENST00000383940 103 ntBASIC2□□□□□ -2.09
PRPF40AO75400 MIR1302-5-201ENST00000408164 150 ntBASIC2□□□□□ -2.09
PRPF40AO75400 MIR1185-1-201ENST00000408598 86 ntBASIC2□□□□□ -2.09
PRPF40AO75400 RNU6-1086P-201ENST00000410930 100 ntBASIC2□□□□□ -2.09
PRPF40AO75400 AP003716.2-201ENST00000528260 108 ntBASIC2□□□□□ -2.09
PRPF40AO75400 FAM71BP1-201ENST00000604431 523 ntBASIC2□□□□□ -2.09
PRPF40AO75400 Y_RNA.323-201ENST00000365157 109 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 RNU6-616P-201ENST00000384353 107 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 AC244023.1-201ENST00000426884 112 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 AL031737.1-201ENST00000450125 223 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 RNU7-35P-201ENST00000517174 62 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 MIR5009-201ENST00000578736 100 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 AC242498.1-201ENST00000604134 111 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 Y_RNA.773-201ENST00000607168 90 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 MIR6516-201ENST00000630554 81 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.99□□□□□ -2.09
PRPF40AO75400 MIR1255B1-201ENST00000636325 63 ntBASIC1.99□□□□□ -2.09
PRPF40AO75400 Y_RNA.155-201ENST00000363632 101 ntBASIC1.98□□□□□ -2.09
PRPF40AO75400 Y_RNA.163-201ENST00000363702 113 ntBASIC1.98□□□□□ -2.09
PRPF40AO75400 MIR588-201ENST00000384900 83 ntBASIC1.98□□□□□ -2.09
PRPF40AO75400 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
PRPF40AO75400 MT-TN-201ENST00000387400 73 ntBASIC1.98□□□□□ -2.09
PRPF40AO75400 RNU6-205P-201ENST00000390858 107 ntBASIC1.98□□□□□ -2.09
PRPF40AO75400 RNU6-237P-201ENST00000515985 71 ntBASIC1.98□□□□□ -2.09
PRPF40AO75400 RNA5SP99-201ENST00000364020 114 ntBASIC1.97□□□□□ -2.09
PRPF40AO75400 snoU13.2-201ENST00000459201 104 ntBASIC1.97□□□□□ -2.09
PRPF40AO75400 MIR1270-201ENST00000459320 83 ntBASIC1.97□□□□□ -2.09
PRPF40AO75400 AC048334.1-201ENST00000477975 159 ntBASIC1.97□□□□□ -2.09
PRPF40AO75400 SNORA31.2-201ENST00000516019 134 ntBASIC1.97□□□□□ -2.09
PRPF40AO75400 RNU7-79P-201ENST00000516082 62 ntBASIC1.97□□□□□ -2.09
PRPF40AO75400 RNU6-94P-201ENST00000607728 107 ntBASIC1.97□□□□□ -2.09
PRPF40AO75400 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PRPF40AO75400 RNU4-67P-201ENST00000364569 141 ntBASIC1.96□□□□□ -2.1
PRPF40AO75400 RNU6-106P-201ENST00000384405 107 ntBASIC1.96□□□□□ -2.1
PRPF40AO75400 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.96□□□□□ -2.1
PRPF40AO75400 RNU6-1054P-201ENST00000411293 104 ntBASIC1.96□□□□□ -2.1
PRPF40AO75400 RNU7-62P-201ENST00000458856 62 ntBASIC1.96□□□□□ -2.1
PRPF40AO75400 AL662814.1-201ENST00000617364 121 ntBASIC1.96□□□□□ -2.1
PRPF40AO75400 AL353997.5-201ENST00000618886 171 ntBASIC1.96□□□□□ -2.1
PRPF40AO75400 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PRPF40AO75400 RNU6-363P-201ENST00000362895 105 ntBASIC1.95□□□□□ -2.1
PRPF40AO75400 RNU6-409P-201ENST00000384114 104 ntBASIC1.95□□□□□ -2.1
PRPF40AO75400 RNU6-613P-201ENST00000410412 108 ntBASIC1.95□□□□□ -2.1
PRPF40AO75400 RNU6-554P-201ENST00000410466 106 ntBASIC1.95□□□□□ -2.1
PRPF40AO75400 MIR4285-201ENST00000581001 85 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 215.4 ms