Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 7SK.8-201ENST00000612110 250 ntBASIC1.09□□□□□ -2.23
ARHGEF9O43307 7SK.11-201ENST00000615477 250 ntBASIC1.09□□□□□ -2.23
ARHGEF9O43307 TUG1_4.1-201ENST00000619464 181 ntBASIC1.09□□□□□ -2.23
ARHGEF9O43307 7SK.13-201ENST00000622040 250 ntBASIC1.09□□□□□ -2.23
ARHGEF9O43307 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.09□□□□□ -2.23
ARHGEF9O43307 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
ARHGEF9O43307 MIR302B-201ENST00000362188 73 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 RNU1-93P-201ENST00000364704 169 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 RNU6-342P-201ENST00000384521 104 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
ARHGEF9O43307 RNU7-80P-201ENST00000459562 61 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 AC107297.1-201ENST00000459991 176 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 AL133373.1-201ENST00000497098 94 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 RNU6-772P-201ENST00000516042 105 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 RNU2-35P-201ENST00000516446 142 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 RNU6-789P-201ENST00000517105 102 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 AC022523.2-201ENST00000561045 150 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 MIR6788-201ENST00000618842 66 ntBASIC1.08□□□□□ -2.24
ARHGEF9O43307 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
ARHGEF9O43307 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.07□□□□□ -2.24
ARHGEF9O43307 MIR96-201ENST00000362288 78 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 Y_RNA.171-201ENST00000363760 102 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 SNORD113-1-201ENST00000365321 69 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 MIR520E-201ENST00000384867 87 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 MT-TI-201ENST00000387365 69 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 MIR1185-1-201ENST00000408598 86 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 MTATP6P21-201ENST00000440681 189 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 RNU7-73P-201ENST00000458743 63 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 RPS29P1-201ENST00000465274 159 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 RN7SKP19-201ENST00000516016 252 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 RNU6-1333P-201ENST00000516162 93 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 RNU6-1061P-201ENST00000516530 99 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 Y_RNA.757-201ENST00000578934 114 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 MIR8055-201ENST00000610739 97 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 AC021613.1-201ENST00000623880 111 ntBASIC1.07□□□□□ -2.24
ARHGEF9O43307 RNU6-654P-201ENST00000364373 107 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 Y_RNA.363-201ENST00000365529 113 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 RNU6-22P-201ENST00000384355 107 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 RNU6-1104P-201ENST00000384723 104 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 MIR1263-201ENST00000408324 86 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 RNA5SP95-201ENST00000410319 137 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 Y_RNA.617-201ENST00000410920 90 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 POLR2J4-204ENST00000418424 324 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 RNY4P20-201ENST00000516678 93 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 AC133485.4-201ENST00000561835 220 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 AC138907.4-201ENST00000570107 226 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 AL357312.1-201ENST00000603879 298 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 PRELID3BP2-201ENST00000605362 201 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 AL137067.1-201ENST00000615933 120 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 MIR6717-201ENST00000622747 73 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.06□□□□□ -2.24
ARHGEF9O43307 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.06□□□□□ -2.24
ARHGEF9O43307 SNORA1.1-201ENST00000364671 133 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 SNORD58C-201ENST00000365223 64 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 MIR539-201ENST00000365690 78 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 SNORD116-14-201ENST00000383894 92 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 SNORD116-17-201ENST00000383929 92 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 Y_RNA.454-201ENST00000384224 113 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 SNORD116-15-201ENST00000384445 92 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 SNORD116-19-201ENST00000384729 92 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 MIR222-201ENST00000384992 110 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 RNA5SP144-201ENST00000410846 116 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 AL591704.2-201ENST00000421658 181 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 AL512326.2-201ENST00000426359 151 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 snoU13.16-201ENST00000459350 104 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 RNU7-123P-201ENST00000515911 60 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 RNU6-659P-201ENST00000516454 104 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 RNU7-53P-201ENST00000516705 60 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 AP003716.2-201ENST00000528260 108 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 AC021443.1-201ENST00000604478 211 ntBASIC1.05□□□□□ -2.24
ARHGEF9O43307 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
ARHGEF9O43307 Y_RNA.127-201ENST00000363386 109 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 Y_RNA.354-201ENST00000365448 111 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 RNU6-80P-201ENST00000384195 107 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 Y_RNA.470-201ENST00000384307 117 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 RNU6-735P-201ENST00000410612 107 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 RNU6-602P-201ENST00000411155 105 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 RNU7-164P-201ENST00000459221 62 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 SNORA31.2-201ENST00000516019 134 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 MIR4305-201ENST00000583252 102 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 uc_338.6-201ENST00000613544 171 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
ARHGEF9O43307 AC012676.2-201ENST00000619258 186 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 MIR6841-201ENST00000637129 72 ntBASIC1.04□□□□□ -2.24
ARHGEF9O43307 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ARHGEF9O43307 AL391516.1-201ENST00000554380 2449 ntBASIC1.03□□□□□ -2.24
ARHGEF9O43307 MIR103A2-201ENST00000362154 78 ntBASIC1.03□□□□□ -2.24
ARHGEF9O43307 SNORA22.1-201ENST00000362701 134 ntBASIC1.03□□□□□ -2.24
ARHGEF9O43307 RNA5SP264-201ENST00000363115 107 ntBASIC1.03□□□□□ -2.24
ARHGEF9O43307 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
ARHGEF9O43307 RNA5SP48-201ENST00000363969 126 ntBASIC1.03□□□□□ -2.24
ARHGEF9O43307 RNU6-647P-201ENST00000364243 107 ntBASIC1.03□□□□□ -2.24
ARHGEF9O43307 RNU6-1117P-201ENST00000384525 104 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms