Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SPDYE4A6NLX3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.72□□□□□ -1.81
SPDYE4A6NLX3 SNORA25.3-201ENST00000363205 127 ntBASIC3.72□□□□□ -1.81
SPDYE4A6NLX3 AP004217.1-201ENST00000480579 346 ntBASIC3.72□□□□□ -1.81
SPDYE4A6NLX3 RNA5SP385-201ENST00000515947 110 ntBASIC3.72□□□□□ -1.81
SPDYE4A6NLX3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.72□□□□□ -1.81
SPDYE4A6NLX3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.72□□□□□ -1.81
SPDYE4A6NLX3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SPDYE4A6NLX3 Y_RNA.36-201ENST00000362602 112 ntBASIC3.71□□□□□ -1.82
SPDYE4A6NLX3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SPDYE4A6NLX3 RN7SL274P-201ENST00000492268 272 ntBASIC3.71□□□□□ -1.82
SPDYE4A6NLX3 SNORA25.16-201ENST00000516741 121 ntBASIC3.71□□□□□ -1.82
SPDYE4A6NLX3 AL162274.2-201ENST00000614406 332 ntBASIC3.71□□□□□ -1.82
SPDYE4A6NLX3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 SNORD17-201ENST00000390930 237 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 RNU6-663P-201ENST00000391105 106 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 AC115115.1-201ENST00000449927 248 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 RN7SL75P-201ENST00000461926 281 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 RNU1-143P-201ENST00000516296 146 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 MIR4529-201ENST00000578110 78 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 MIR4276-201ENST00000584832 70 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 U1.23-201ENST00000610293 146 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 RNU1-68P-201ENST00000615382 146 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 MIR8057-201ENST00000620957 69 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 U1.39-201ENST00000621562 146 ntBASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SPDYE4A6NLX3 RNY4P3-201ENST00000365254 95 ntBASIC3.69□□□□□ -1.82
SPDYE4A6NLX3 MIR942-201ENST00000401111 86 ntBASIC3.69□□□□□ -1.82
SPDYE4A6NLX3 AL161935.2-201ENST00000414627 60 ntBASIC3.69□□□□□ -1.82
SPDYE4A6NLX3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SPDYE4A6NLX3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SPDYE4A6NLX3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SPDYE4A6NLX3 Y_RNA.42-201ENST00000362660 108 ntBASIC3.68□□□□□ -1.82
SPDYE4A6NLX3 RNU6-1051P-201ENST00000365471 102 ntBASIC3.68□□□□□ -1.82
SPDYE4A6NLX3 RNU6-471P-201ENST00000383944 106 ntBASIC3.68□□□□□ -1.82
SPDYE4A6NLX3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.68□□□□□ -1.82
SPDYE4A6NLX3 SNORD93-201ENST00000408813 74 ntBASIC3.68□□□□□ -1.82
SPDYE4A6NLX3 RN7SKP123-201ENST00000410732 291 ntBASIC3.68□□□□□ -1.82
SPDYE4A6NLX3 snoU13.17-201ENST00000458802 104 ntBASIC3.68□□□□□ -1.82
SPDYE4A6NLX3 MIR5680-201ENST00000577577 84 ntBASIC3.68□□□□□ -1.82
SPDYE4A6NLX3 MIR4506-201ENST00000584693 77 ntBASIC3.68□□□□□ -1.82
SPDYE4A6NLX3 U4.3-201ENST00000621047 82 ntBASIC3.68□□□□□ -1.82
SPDYE4A6NLX3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SPDYE4A6NLX3 SNORA9.3-201ENST00000516383 129 ntBASIC3.67□□□□□ -1.82
SPDYE4A6NLX3 RNU7-10P-201ENST00000607194 63 ntBASIC3.67□□□□□ -1.82
SPDYE4A6NLX3 MIR7112-201ENST00000616126 65 ntBASIC3.67□□□□□ -1.82
SPDYE4A6NLX3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SPDYE4A6NLX3 Y_RNA.239-201ENST00000364444 113 ntBASIC3.66□□□□□ -1.82
SPDYE4A6NLX3 Y_RNA.588-201ENST00000391254 102 ntBASIC3.66□□□□□ -1.82
SPDYE4A6NLX3 uc_338.6-201ENST00000613544 171 ntBASIC3.66□□□□□ -1.82
SPDYE4A6NLX3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.66□□□□□ -1.82
SPDYE4A6NLX3 MIR377-201ENST00000362145 69 ntBASIC3.65□□□□□ -1.83
SPDYE4A6NLX3 MIR101-2-201ENST00000362195 79 ntBASIC3.65□□□□□ -1.83
SPDYE4A6NLX3 SNORD115-31-201ENST00000365318 82 ntBASIC3.65□□□□□ -1.83
SPDYE4A6NLX3 SNORD100-201ENST00000408573 76 ntBASIC3.65□□□□□ -1.83
SPDYE4A6NLX3 JTBP1-201ENST00000441314 247 ntBASIC3.65□□□□□ -1.83
SPDYE4A6NLX3 SNORA31.25-201ENST00000517242 134 ntBASIC3.65□□□□□ -1.83
SPDYE4A6NLX3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.65□□□□□ -1.83
SPDYE4A6NLX3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SPDYE4A6NLX3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPDYE4A6NLX3 Y_RNA.207-201ENST00000364142 106 ntBASIC3.64□□□□□ -1.83
SPDYE4A6NLX3 RN7SL20P-201ENST00000488827 297 ntBASIC3.64□□□□□ -1.83
SPDYE4A6NLX3 IGKV2-26-201ENST00000518305 343 ntBASIC3.64□□□□□ -1.83
SPDYE4A6NLX3 GHRLOS.1-201ENST00000610995 70 ntBASIC3.64□□□□□ -1.83
SPDYE4A6NLX3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 RNU6-340P-201ENST00000364005 107 ntBASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 Y_RNA.371-201ENST00000365591 113 ntBASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 RNU6-154P-201ENST00000384306 106 ntBASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 Y_RNA.536-201ENST00000384621 113 ntBASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 RPS27P16-201ENST00000425758 201 ntBASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 AC093423.1-201ENST00000440817 142 ntBASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 RNU7-195P-201ENST00000458793 62 ntBASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 RNU11-2P-201ENST00000516898 142 ntBASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 RNU7-156P-201ENST00000517214 74 ntBASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 MIR548H5-201ENST00000580314 60 ntBASIC3.63□□□□□ -1.83
SPDYE4A6NLX3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 RNU4-82P-201ENST00000362443 140 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 RNA5SP374-201ENST00000362939 125 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 RNU6-330P-201ENST00000363015 107 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 RNU6-403P-201ENST00000363163 104 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 RNU6-681P-201ENST00000364012 104 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 MIR519A1-201ENST00000385257 85 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 COTL1P1-201ENST00000422309 375 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 MIR18B-201ENST00000454574 71 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 TRAJ51-201ENST00000504127 63 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 MIR4325-201ENST00000583049 90 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 TRDV1-202ENST00000621643 102 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 AC006386.2-201ENST00000624491 75 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 AC012005.1-201ENST00000624575 75 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 MIR6516-201ENST00000630554 81 ntBASIC3.62□□□□□ -1.83
SPDYE4A6NLX3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.61□□□□□ -1.83
SPDYE4A6NLX3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.61□□□□□ -1.83
SPDYE4A6NLX3 RNU1-36P-201ENST00000365130 165 ntBASIC3.61□□□□□ -1.83
SPDYE4A6NLX3 RNU6-291P-201ENST00000384720 107 ntBASIC3.61□□□□□ -1.83
SPDYE4A6NLX3 RNA5SP341-201ENST00000516261 117 ntBASIC3.61□□□□□ -1.83
SPDYE4A6NLX3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.61□□□□□ -1.83
SPDYE4A6NLX3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.61□□□□□ -1.83
SPDYE4A6NLX3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms