Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-308P-201ENST00000390957 107 ntBASIC-1.61□□□□□ -2.67
TRAV1-2A0A0B4J238 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.61□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-311P-201ENST00000516224 102 ntBASIC-1.61□□□□□ -2.67
TRAV1-2A0A0B4J238 SNORD67.1-201ENST00000516618 108 ntBASIC-1.61□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR5591-201ENST00000578248 65 ntBASIC-1.61□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR4500-201ENST00000579472 76 ntBASIC-1.61□□□□□ -2.67
TRAV1-2A0A0B4J238 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.61□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR6129-201ENST00000616087 109 ntBASIC-1.61□□□□□ -2.67
TRAV1-2A0A0B4J238 AC132825.6-201ENST00000638861 357 ntBASIC-1.61□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-553P-201ENST00000364047 96 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 SNORA51.5-201ENST00000384126 131 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 RNY3P4-201ENST00000384428 101 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR601-201ENST00000385256 79 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-397P-201ENST00000516226 104 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-287P-201ENST00000516230 98 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-479P-201ENST00000516348 105 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU1-54P-201ENST00000517181 120 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR3145-201ENST00000580727 82 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 AC092794.2-201ENST00000620933 563 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 AC068137.3-201ENST00000639191 341 ntBASIC-1.62□□□□□ -2.67
TRAV1-2A0A0B4J238 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 SNORD114-17-201ENST00000364699 75 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-588P-201ENST00000410281 105 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-592P-201ENST00000411333 103 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 MTCO2P24-201ENST00000515611 426 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR1244-1-201ENST00000612829 85 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR1244-3-201ENST00000635744 85 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR1244-2-201ENST00000636449 85 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 AL669831.3-213ENST00000636676 183 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR1244-4-202ENST00000636813 85 ntBASIC-1.63□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-899P-201ENST00000363947 107 ntBASIC-1.64□□□□□ -2.67
TRAV1-2A0A0B4J238 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.64□□□□□ -2.67
TRAV1-2A0A0B4J238 SNORD78.2-201ENST00000391076 69 ntBASIC-1.64□□□□□ -2.67
TRAV1-2A0A0B4J238 AC107027.2-201ENST00000512197 115 ntBASIC-1.64□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.64□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR4528-201ENST00000577763 90 ntBASIC-1.64□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR4659A-201ENST00000580269 81 ntBASIC-1.64□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR5197-201ENST00000583721 112 ntBASIC-1.64□□□□□ -2.67
TRAV1-2A0A0B4J238 AC005014.3-201ENST00000605985 190 ntBASIC-1.64□□□□□ -2.67
TRAV1-2A0A0B4J238 AF246928.1-201ENST00000623768 87 ntBASIC-1.64□□□□□ -2.67
TRAV1-2A0A0B4J238 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.65□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR2053-201ENST00000459295 91 ntBASIC-1.65□□□□□ -2.67
TRAV1-2A0A0B4J238 RNU7-106P-201ENST00000459514 67 ntBASIC-1.65□□□□□ -2.67
TRAV1-2A0A0B4J238 MTND3P12-201ENST00000559068 328 ntBASIC-1.65□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR3942-201ENST00000585264 109 ntBASIC-1.65□□□□□ -2.67
TRAV1-2A0A0B4J238 AC040904.1-201ENST00000590850 223 ntBASIC-1.65□□□□□ -2.67
TRAV1-2A0A0B4J238 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.65□□□□□ -2.67
TRAV1-2A0A0B4J238 MIR6128-201ENST00000615528 109 ntBASIC-1.65□□□□□ -2.67
TRAV1-2A0A0B4J238 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 SNORD115-20-201ENST00000365099 82 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 SNORA40.4-201ENST00000390971 128 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-232P-201ENST00000517144 64 ntBASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.66□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR365A-201ENST00000362260 87 ntBASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-170P-201ENST00000362832 104 ntBASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 MT-TH-201ENST00000387441 69 ntBASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU2-66P-201ENST00000410650 161 ntBASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU7-134P-201ENST00000458997 64 ntBASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-759P-201ENST00000516740 103 ntBASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR3915-201ENST00000578518 97 ntBASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR198-201ENST00000637333 62 ntBASIC-1.67□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.68□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.68□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR582-201ENST00000365731 98 ntBASIC-1.68□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.68□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.68□□□□□ -2.68
TRAV1-2A0A0B4J238 AL365203.2-201ENST00000423444 196 ntBASIC-1.68□□□□□ -2.68
TRAV1-2A0A0B4J238 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.68□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU7-125P-201ENST00000458760 62 ntBASIC-1.68□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR4441-201ENST00000582623 100 ntBASIC-1.68□□□□□ -2.68
TRAV1-2A0A0B4J238 TPTEP1-208ENST00000636884 213 ntBASIC-1.68□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.69□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.69□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.69□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.69□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.69□□□□□ -2.68
TRAV1-2A0A0B4J238 SNORA32-201ENST00000384072 121 ntBASIC-1.69□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.69□□□□□ -2.68
TRAV1-2A0A0B4J238 SNORA69.1-201ENST00000390904 137 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms