Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 UBE2DNL-203ENST00000474922 222 ntBASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 RNA5SP445-201ENST00000515889 115 ntBASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 MIR3126-201ENST00000577443 74 ntBASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 SNORA4-201ENST00000584302 138 ntBASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 AC242498.1-201ENST00000604134 111 ntBASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PCDHGA4Q9Y5G9 AC093010.3-201ENST00000570269 15214 ntBASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 RNA5SP374-201ENST00000362939 125 ntBASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 MIR588-201ENST00000384900 83 ntBASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 EIF4BP1-201ENST00000554881 351 ntBASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 MIR5680-201ENST00000577577 84 ntBASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 AP006437.1-201ENST00000641440 3685 ntBASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGA4Q9Y5G9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 RNU6-112P-201ENST00000363599 104 ntBASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 RNU6-957P-201ENST00000363652 99 ntBASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 RNU6-340P-201ENST00000364005 107 ntBASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 Y_RNA.371-201ENST00000365591 113 ntBASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 Y_RNA.443-201ENST00000384135 111 ntBASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 AC009474.2-201ENST00000451383 136 ntBASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PCDHGA4Q9Y5G9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 RNU1-91P-201ENST00000364746 163 ntBASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 RNU6-1051P-201ENST00000365471 102 ntBASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 MIR563-201ENST00000385080 79 ntBASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 SNORA48.1-201ENST00000390879 135 ntBASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 RNA5SP492-201ENST00000411330 114 ntBASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 RNU7-106P-201ENST00000459514 67 ntBASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 RNU7-41P-201ENST00000515917 61 ntBASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 IGKV2-26-201ENST00000518305 343 ntBASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 AC131280.1-202ENST00000624067 4211 ntBASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA4Q9Y5G9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 RNU6-681P-201ENST00000364012 104 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 RNY4P3-201ENST00000365254 95 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 Y_RNA.510-201ENST00000384511 114 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 MIR1283-2-201ENST00000408621 87 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 HMGN2P35-201ENST00000412164 270 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 HMGN2P3-201ENST00000433603 273 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 AC092628.1-201ENST00000436250 252 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 HMGN2P5-201ENST00000436882 273 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 MIR5004-201ENST00000579078 107 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 AL162274.2-201ENST00000614406 332 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA4Q9Y5G9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 AL365361.1-201ENST00000566942 3481 ntBASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 Y_RNA.207-201ENST00000364142 106 ntBASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 RNA5SP465-201ENST00000391195 109 ntBASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 AC104389.3-201ENST00000445629 235 ntBASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 RNU7-26P-201ENST00000458980 63 ntBASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 MIR3675-201ENST00000583661 73 ntBASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA4Q9Y5G9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGA4Q9Y5G9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGA4Q9Y5G9 RNU6-614P-201ENST00000384369 107 ntBASIC3.24□□□□□ -1.89
PCDHGA4Q9Y5G9 MIR4276-201ENST00000584832 70 ntBASIC3.24□□□□□ -1.89
PCDHGA4Q9Y5G9 U6.59-201ENST00000615686 107 ntBASIC3.24□□□□□ -1.89
PCDHGA4Q9Y5G9 AC006386.2-201ENST00000624491 75 ntBASIC3.24□□□□□ -1.89
PCDHGA4Q9Y5G9 AC012005.1-201ENST00000624575 75 ntBASIC3.24□□□□□ -1.89
PCDHGA4Q9Y5G9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGA4Q9Y5G9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PCDHGA4Q9Y5G9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 SNORD56.5-201ENST00000364281 72 ntBASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 SNORA67.4-201ENST00000384688 142 ntBASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 SNORD63B-201ENST00000411005 70 ntBASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 COTL1P1-201ENST00000422309 375 ntBASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 HMGN1P18-201ENST00000457642 277 ntBASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 MIR8053-201ENST00000613344 75 ntBASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 MIR6733-201ENST00000635723 61 ntBASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 AC103706.3-201ENST00000636297 85 ntBASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGA4Q9Y5G9 SNORD45A-201ENST00000384512 84 ntBASIC3.22□□□□□ -1.89
PCDHGA4Q9Y5G9 S100A11P2-201ENST00000467589 312 ntBASIC3.22□□□□□ -1.89
PCDHGA4Q9Y5G9 RNU6-322P-201ENST00000516010 103 ntBASIC3.22□□□□□ -1.89
PCDHGA4Q9Y5G9 RNU6-1194P-201ENST00000516208 104 ntBASIC3.22□□□□□ -1.89
PCDHGA4Q9Y5G9 RNA5SP341-201ENST00000516261 117 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms