Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC021613.1-201ENST00000623880 111 ntBASIC1.49□□□□□ -2.17
PCDHGA9Q9Y5G4 MIR517C-201ENST00000385103 95 ntBASIC1.48□□□□□ -2.17
PCDHGA9Q9Y5G4 RNU6-910P-201ENST00000390844 107 ntBASIC1.48□□□□□ -2.17
PCDHGA9Q9Y5G4 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
PCDHGA9Q9Y5G4 RNU6-460P-201ENST00000391158 108 ntBASIC1.48□□□□□ -2.17
PCDHGA9Q9Y5G4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.48□□□□□ -2.17
PCDHGA9Q9Y5G4 MIR3133-201ENST00000583157 78 ntBASIC1.48□□□□□ -2.17
PCDHGA9Q9Y5G4 AL022345.2-201ENST00000606307 135 ntBASIC1.48□□□□□ -2.17
PCDHGA9Q9Y5G4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.48□□□□□ -2.17
PCDHGA9Q9Y5G4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 RNU6-349P-201ENST00000362402 107 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 RNU6-690P-201ENST00000365242 106 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 AL603908.1-201ENST00000406098 201 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 MIR1185-1-201ENST00000408598 86 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 RNU6-613P-201ENST00000410412 108 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 RNU6-426P-201ENST00000516464 97 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 RNU2-60P-201ENST00000517290 128 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 MIR4264-201ENST00000583520 66 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
PCDHGA9Q9Y5G4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR539-201ENST00000365690 78 ntBASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORA25-201ENST00000384384 134 ntBASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR222-201ENST00000384992 110 ntBASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR1302-7-201ENST00000408841 72 ntBASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU7-90P-201ENST00000459216 62 ntBASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORD79.1-201ENST00000516069 84 ntBASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU6-346P-201ENST00000516288 111 ntBASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR3121-201ENST00000579680 77 ntBASIC1.46□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR377-201ENST00000362145 69 ntBASIC1.45□□□□□ -2.18
PCDHGA9Q9Y5G4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.45□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU6-647P-201ENST00000364243 107 ntBASIC1.45□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR518E-201ENST00000385252 88 ntBASIC1.45□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORA26.6-201ENST00000391256 115 ntBASIC1.45□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
PCDHGA9Q9Y5G4 AC133485.4-201ENST00000561835 220 ntBASIC1.45□□□□□ -2.18
PCDHGA9Q9Y5G4 AC138907.4-201ENST00000570107 226 ntBASIC1.45□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORA7.1-201ENST00000363750 139 ntBASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 RNY1P11-201ENST00000363759 113 ntBASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU6-309P-201ENST00000364573 106 ntBASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORA25.8-201ENST00000364831 128 ntBASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 AL022718.1-201ENST00000412004 84 ntBASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU7-21P-201ENST00000459430 62 ntBASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 AC091895.1-201ENST00000624494 256 ntBASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR6516-201ENST00000630554 81 ntBASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 ZNF209P-201ENST00000593450 2304 ntBASIC1.44□□□□□ -2.18
PCDHGA9Q9Y5G4 RNA5SP327-201ENST00000362494 101 ntBASIC1.43□□□□□ -2.18
PCDHGA9Q9Y5G4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.43□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU6-602P-201ENST00000411155 105 ntBASIC1.43□□□□□ -2.18
PCDHGA9Q9Y5G4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.43□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
PCDHGA9Q9Y5G4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
PCDHGA9Q9Y5G4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.43□□□□□ -2.18
PCDHGA9Q9Y5G4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORA22.1-201ENST00000362701 134 ntBASIC1.42□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU6-704P-201ENST00000364162 103 ntBASIC1.42□□□□□ -2.18
PCDHGA9Q9Y5G4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.42□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU5E-3P-201ENST00000515913 68 ntBASIC1.42□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU6-774P-201ENST00000363238 107 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORD113.3-201ENST00000364630 78 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORA75.2-201ENST00000391138 150 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORA75.3-201ENST00000391231 150 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 SNORD111-201ENST00000408139 94 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR1276-201ENST00000408707 83 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 Y_RNA.651-201ENST00000459380 103 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR4305-201ENST00000583252 102 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 MIR6841-201ENST00000637129 72 ntBASIC1.41□□□□□ -2.18
PCDHGA9Q9Y5G4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
PCDHGA9Q9Y5G4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.4□□□□□ -2.19
PCDHGA9Q9Y5G4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.4□□□□□ -2.19
PCDHGA9Q9Y5G4 RNA5SP144-201ENST00000410846 116 ntBASIC1.4□□□□□ -2.19
PCDHGA9Q9Y5G4 AC063976.4-201ENST00000421971 163 ntBASIC1.4□□□□□ -2.19
PCDHGA9Q9Y5G4 MTND4LP9-201ENST00000427694 174 ntBASIC1.4□□□□□ -2.19
PCDHGA9Q9Y5G4 HMGN1P33-201ENST00000432945 451 ntBASIC1.4□□□□□ -2.19
PCDHGA9Q9Y5G4 RNU7-45P-201ENST00000459460 63 ntBASIC1.4□□□□□ -2.19
PCDHGA9Q9Y5G4 RNU6-240P-201ENST00000516098 97 ntBASIC1.4□□□□□ -2.19
PCDHGA9Q9Y5G4 AC021443.1-201ENST00000604478 211 ntBASIC1.4□□□□□ -2.19
PCDHGA9Q9Y5G4 MIR6504-201ENST00000613520 61 ntBASIC1.4□□□□□ -2.19
PCDHGA9Q9Y5G4 Y_RNA.114-201ENST00000363265 113 ntBASIC1.39□□□□□ -2.19
PCDHGA9Q9Y5G4 RNU6-580P-201ENST00000365159 107 ntBASIC1.39□□□□□ -2.19
PCDHGA9Q9Y5G4 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
PCDHGA9Q9Y5G4 RNU6-257P-201ENST00000410238 98 ntBASIC1.39□□□□□ -2.19
PCDHGA9Q9Y5G4 RNU6-1190P-201ENST00000410811 104 ntBASIC1.39□□□□□ -2.19
PCDHGA9Q9Y5G4 AC019288.1-201ENST00000557918 224 ntBASIC1.39□□□□□ -2.19
PCDHGA9Q9Y5G4 AL137067.1-201ENST00000615933 120 ntBASIC1.39□□□□□ -2.19
PCDHGA9Q9Y5G4 AC027335.2-201ENST00000624030 375 ntBASIC1.39□□□□□ -2.19
PCDHGA9Q9Y5G4 RNU4-16P-201ENST00000364737 141 ntBASIC1.38□□□□□ -2.19
PCDHGA9Q9Y5G4 MIR618-201ENST00000385287 98 ntBASIC1.38□□□□□ -2.19
PCDHGA9Q9Y5G4 MIR1323-201ENST00000408090 73 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms