Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 RNU6-905P-201ENST00000384434 107 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 SNORD38B-201ENST00000384690 67 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-733P-201ENST00000410759 104 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 RPL31P63-201ENST00000422565 375 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 RPL23AP42-201ENST00000471152 471 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-904P-201ENST00000516206 101 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 SNORD38B-202ENST00000625943 69 ntBASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SF3B6Q9Y3B4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 MIR302D-201ENST00000362275 68 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-1255P-201ENST00000363434 112 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 Y_RNA.360-201ENST00000365512 102 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 SNORA67.4-201ENST00000384688 142 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 MIR30A-201ENST00000385092 71 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 RNY4P30-201ENST00000410216 95 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 RNU4-53P-201ENST00000410828 140 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 AL353813.1-201ENST00000440700 253 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 snoU13.25-201ENST00000458945 104 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 SNORD53-201ENST00000579969 78 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 FAM71BP1-201ENST00000604431 523 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 AL590808.1-201ENST00000618696 141 ntBASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
SF3B6Q9Y3B4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 Y_RNA.78-201ENST00000362970 110 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-640P-201ENST00000363693 105 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 SNORD1A-201ENST00000364968 72 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-679P-201ENST00000391003 106 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 SNORA48.3-201ENST00000391081 134 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 AC008413.1-201ENST00000511864 177 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-521P-201ENST00000516663 105 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 RNU7-35P-201ENST00000517174 62 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 DEFB131E-201ENST00000532329 154 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 MIR5694-201ENST00000581190 76 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-1099P-201ENST00000363533 107 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 Y_RNA.544-201ENST00000384650 113 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 MIR577-201ENST00000385196 96 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 MIR1302-7-201ENST00000408841 72 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 AC079140.2-201ENST00000506193 142 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 Y_RNA.694-201ENST00000516677 117 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.91□□□□□ -2.1
SF3B6Q9Y3B4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
SF3B6Q9Y3B4 RNY3P2-201ENST00000362918 102 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 RNU4-36P-201ENST00000364294 144 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 RNU4-52P-201ENST00000384209 138 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 SNORA67.3-201ENST00000384366 140 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 AC244023.1-201ENST00000426884 112 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 AL356320.1-201ENST00000429616 163 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 RPL39P39-201ENST00000455840 151 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 RNA5SP200-201ENST00000516360 103 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 MIR5582-201ENST00000579697 68 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 AC242498.1-201ENST00000604134 111 ntBASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SF3B6Q9Y3B4 RNA5SP289-201ENST00000362332 137 ntBASIC1.89□□□□□ -2.11
SF3B6Q9Y3B4 MIR221-201ENST00000385135 110 ntBASIC1.89□□□□□ -2.11
SF3B6Q9Y3B4 RNU7-79P-201ENST00000516082 62 ntBASIC1.89□□□□□ -2.11
SF3B6Q9Y3B4 SNORA40.13-201ENST00000516379 120 ntBASIC1.89□□□□□ -2.11
SF3B6Q9Y3B4 SNORA44.1-201ENST00000517031 108 ntBASIC1.89□□□□□ -2.11
SF3B6Q9Y3B4 MIR4694-201ENST00000578534 80 ntBASIC1.89□□□□□ -2.11
SF3B6Q9Y3B4 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
SF3B6Q9Y3B4 Y_RNA.818-201ENST00000618813 71 ntBASIC1.89□□□□□ -2.11
SF3B6Q9Y3B4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SF3B6Q9Y3B4 RNU6-1307P-201ENST00000391012 103 ntBASIC1.88□□□□□ -2.11
SF3B6Q9Y3B4 RNA5SP425-201ENST00000410336 112 ntBASIC1.88□□□□□ -2.11
SF3B6Q9Y3B4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.88□□□□□ -2.11
SF3B6Q9Y3B4 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
SF3B6Q9Y3B4 RNU7-2P-201ENST00000516096 62 ntBASIC1.88□□□□□ -2.11
SF3B6Q9Y3B4 SNORD67.1-201ENST00000516618 108 ntBASIC1.88□□□□□ -2.11
SF3B6Q9Y3B4 MIR3937-201ENST00000580135 106 ntBASIC1.88□□□□□ -2.11
SF3B6Q9Y3B4 MIR6873-201ENST00000622788 63 ntBASIC1.88□□□□□ -2.11
SF3B6Q9Y3B4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SF3B6Q9Y3B4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SF3B6Q9Y3B4 ZNF658B-202ENST00000615961 3375 ntBASIC1.87□□□□□ -2.11
SF3B6Q9Y3B4 RNU6-832P-201ENST00000363319 107 ntBASIC1.87□□□□□ -2.11
SF3B6Q9Y3B4 RNA5SP126-201ENST00000365092 109 ntBASIC1.87□□□□□ -2.11
SF3B6Q9Y3B4 SNORD115-35-201ENST00000365122 82 ntBASIC1.87□□□□□ -2.11
SF3B6Q9Y3B4 MIR206-201ENST00000384872 86 ntBASIC1.87□□□□□ -2.11
SF3B6Q9Y3B4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms