Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 SNORA20-201ENST00000384662 132 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 SNORA75.2-201ENST00000391138 150 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 SNORA75.3-201ENST00000391231 150 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 SUMO1P3-201ENST00000439961 304 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 RNU7-73P-201ENST00000458743 63 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 RNU2-11P-201ENST00000459191 187 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 RNU7-96P-201ENST00000459535 64 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 AL133373.1-201ENST00000497098 94 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 MIR3133-201ENST00000583157 78 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 AL020996.3-201ENST00000606617 222 ntBASIC1.13□□□□□ -2.23
UPF2Q9HAU5 RNU6-349P-201ENST00000362402 107 ntBASIC1.12□□□□□ -2.23
UPF2Q9HAU5 RNA5SP264-201ENST00000363115 107 ntBASIC1.12□□□□□ -2.23
UPF2Q9HAU5 RNA5SP48-201ENST00000363969 126 ntBASIC1.12□□□□□ -2.23
UPF2Q9HAU5 RNU6-309P-201ENST00000364573 106 ntBASIC1.12□□□□□ -2.23
UPF2Q9HAU5 SNORA25.9-201ENST00000365087 128 ntBASIC1.12□□□□□ -2.23
UPF2Q9HAU5 Y_RNA.351-201ENST00000365436 96 ntBASIC1.12□□□□□ -2.23
UPF2Q9HAU5 SNORD37.2-201ENST00000391075 66 ntBASIC1.12□□□□□ -2.23
UPF2Q9HAU5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.12□□□□□ -2.23
UPF2Q9HAU5 AL035398.1-201ENST00000430869 322 ntBASIC1.12□□□□□ -2.23
UPF2Q9HAU5 MIR548X2-201ENST00000579776 100 ntBASIC1.12□□□□□ -2.23
UPF2Q9HAU5 MIR342-201ENST00000362212 99 ntBASIC1.11□□□□□ -2.23
UPF2Q9HAU5 RNU6-654P-201ENST00000364373 107 ntBASIC1.11□□□□□ -2.23
UPF2Q9HAU5 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
UPF2Q9HAU5 RNU7-67P-201ENST00000459003 62 ntBASIC1.11□□□□□ -2.23
UPF2Q9HAU5 RPL39P28-201ENST00000465655 155 ntBASIC1.11□□□□□ -2.23
UPF2Q9HAU5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.11□□□□□ -2.23
UPF2Q9HAU5 MIR6516-201ENST00000630554 81 ntBASIC1.11□□□□□ -2.23
UPF2Q9HAU5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.11□□□□□ -2.23
UPF2Q9HAU5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
UPF2Q9HAU5 Y_RNA.280-201ENST00000364765 112 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 Y_RNA.420-201ENST00000384043 110 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 Y_RNA.584-201ENST00000391090 114 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 AC244023.1-201ENST00000426884 112 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 snoU13.16-201ENST00000459350 104 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 AC013244.2-201ENST00000603396 103 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 AC242498.1-201ENST00000604134 111 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 AC108081.1-201ENST00000604358 221 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 MIR6841-201ENST00000637129 72 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 Z97988.1-201ENST00000637697 135 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 AL596211.1-201ENST00000569873 2277 ntBASIC1.1□□□□□ -2.23
UPF2Q9HAU5 Y_RNA.120-201ENST00000363304 110 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 Y_RNA.294-201ENST00000364916 102 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 RNU6-915P-201ENST00000364943 103 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 RNU6-746P-201ENST00000384112 109 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 SNORA25-201ENST00000384384 134 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 Y_RNA.568-201ENST00000384742 113 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 RPL39P39-201ENST00000455840 151 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 SNORD79.1-201ENST00000516069 84 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 Y_RNA.703-201ENST00000516846 111 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 RNU6-1258P-201ENST00000516911 111 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 MIR8070-201ENST00000616510 88 ntBASIC1.09□□□□□ -2.23
UPF2Q9HAU5 MIR103A2-201ENST00000362154 78 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 SNORD114-2-201ENST00000363953 78 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 RNU4-16P-201ENST00000364737 141 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 Y_RNA.488-201ENST00000384403 102 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 MIR499A-201ENST00000384903 122 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 RNU6-910P-201ENST00000390844 107 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 AL603914.1-201ENST00000401964 204 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 RNU6-257P-201ENST00000410238 98 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 RNA5SP95-201ENST00000410319 137 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 RNU6-602P-201ENST00000411155 105 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 AC107297.1-201ENST00000459991 176 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.08□□□□□ -2.24
UPF2Q9HAU5 IGKV1-22-201ENST00000524313 326 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 uc_338.6-201ENST00000613544 171 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 MIR6717-201ENST00000622747 73 ntBASIC1.08□□□□□ -2.24
UPF2Q9HAU5 MTND4LP9-201ENST00000427694 174 ntBASIC1.07□□□□□ -2.24
UPF2Q9HAU5 Y_RNA.690-201ENST00000516603 95 ntBASIC1.07□□□□□ -2.24
UPF2Q9HAU5 RNU7-53P-201ENST00000516705 60 ntBASIC1.07□□□□□ -2.24
UPF2Q9HAU5 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
UPF2Q9HAU5 MIR3121-201ENST00000579680 77 ntBASIC1.07□□□□□ -2.24
UPF2Q9HAU5 AL022345.2-201ENST00000606307 135 ntBASIC1.07□□□□□ -2.24
UPF2Q9HAU5 AC027335.2-201ENST00000624030 375 ntBASIC1.07□□□□□ -2.24
UPF2Q9HAU5 AP001340.1-201ENST00000624405 217 ntBASIC1.07□□□□□ -2.24
UPF2Q9HAU5 RNU1-133P-201ENST00000364867 167 ntBASIC1.06□□□□□ -2.24
UPF2Q9HAU5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
UPF2Q9HAU5 MIR513C-201ENST00000401352 84 ntBASIC1.06□□□□□ -2.24
UPF2Q9HAU5 POLR2J4-204ENST00000418424 324 ntBASIC1.06□□□□□ -2.24
UPF2Q9HAU5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.06□□□□□ -2.24
UPF2Q9HAU5 RNU7-21P-201ENST00000459430 62 ntBASIC1.06□□□□□ -2.24
UPF2Q9HAU5 RNU7-80P-201ENST00000459562 61 ntBASIC1.06□□□□□ -2.24
UPF2Q9HAU5 AC021613.1-201ENST00000623880 111 ntBASIC1.06□□□□□ -2.24
UPF2Q9HAU5 AC010332.2-201ENST00000613083 1904 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.05□□□□□ -2.24
UPF2Q9HAU5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 Y_RNA.224-201ENST00000364308 111 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 RNY1P6-201ENST00000384193 109 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 RNU6-1067P-201ENST00000384752 107 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 RNU6-1319P-201ENST00000390855 104 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 RNU6-747P-201ENST00000390928 104 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 RNU6-241P-201ENST00000391148 104 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 RNU6-177P-201ENST00000411257 104 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 RNU6-240P-201ENST00000516098 97 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 RNA5SP102-201ENST00000516865 106 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 SNORA70.22-201ENST00000517160 124 ntBASIC1.05□□□□□ -2.24
UPF2Q9HAU5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
UPF2Q9HAU5 Y_RNA.586-201ENST00000391146 98 ntBASIC1.04□□□□□ -2.24
UPF2Q9HAU5 RNU6-613P-201ENST00000410412 108 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms