Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNU7-164P-201ENST00000459221 62 ntBASIC1.77□□□□□ -2.13
CCDC113Q9H0I3 RNU6-1234P-201ENST00000516877 103 ntBASIC1.77□□□□□ -2.13
CCDC113Q9H0I3 RNU11-2P-201ENST00000516898 142 ntBASIC1.77□□□□□ -2.13
CCDC113Q9H0I3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.77□□□□□ -2.13
CCDC113Q9H0I3 Y_RNA.71-201ENST00000362892 104 ntBASIC1.76□□□□□ -2.13
CCDC113Q9H0I3 SNORA26.6-201ENST00000391256 115 ntBASIC1.76□□□□□ -2.13
CCDC113Q9H0I3 snoU13.25-201ENST00000458945 104 ntBASIC1.76□□□□□ -2.13
CCDC113Q9H0I3 RNU6-406P-201ENST00000516470 107 ntBASIC1.76□□□□□ -2.13
CCDC113Q9H0I3 RNU6-62P-201ENST00000516526 102 ntBASIC1.76□□□□□ -2.13
CCDC113Q9H0I3 MIR2115-201ENST00000516657 100 ntBASIC1.76□□□□□ -2.13
CCDC113Q9H0I3 MIR4303-201ENST00000581299 66 ntBASIC1.76□□□□□ -2.13
CCDC113Q9H0I3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC113Q9H0I3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC113Q9H0I3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC113Q9H0I3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.75□□□□□ -2.13
CCDC113Q9H0I3 SNORA67.5-201ENST00000391036 107 ntBASIC1.75□□□□□ -2.13
CCDC113Q9H0I3 MIR1263-201ENST00000408324 86 ntBASIC1.75□□□□□ -2.13
CCDC113Q9H0I3 RN7SKP179-201ENST00000516126 217 ntBASIC1.75□□□□□ -2.13
CCDC113Q9H0I3 AP000753.3-201ENST00000604083 169 ntBASIC1.75□□□□□ -2.13
CCDC113Q9H0I3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.75□□□□□ -2.13
CCDC113Q9H0I3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CCDC113Q9H0I3 RNA5SP144-201ENST00000410846 116 ntBASIC1.74□□□□□ -2.13
CCDC113Q9H0I3 AC108667.1-201ENST00000428618 249 ntBASIC1.74□□□□□ -2.13
CCDC113Q9H0I3 AP000942.3-201ENST00000603702 160 ntBASIC1.74□□□□□ -2.13
CCDC113Q9H0I3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CCDC113Q9H0I3 Y_RNA.280-201ENST00000364765 112 ntBASIC1.73□□□□□ -2.13
CCDC113Q9H0I3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.73□□□□□ -2.13
CCDC113Q9H0I3 SNORA19-201ENST00000384737 128 ntBASIC1.73□□□□□ -2.13
CCDC113Q9H0I3 MIR1185-1-201ENST00000408598 86 ntBASIC1.73□□□□□ -2.13
CCDC113Q9H0I3 RNU6-602P-201ENST00000411155 105 ntBASIC1.73□□□□□ -2.13
CCDC113Q9H0I3 AC008267.6-201ENST00000441664 139 ntBASIC1.73□□□□□ -2.13
CCDC113Q9H0I3 RNU7-113P-201ENST00000459273 62 ntBASIC1.73□□□□□ -2.13
CCDC113Q9H0I3 U2.22-201ENST00000636441 106 ntBASIC1.73□□□□□ -2.13
CCDC113Q9H0I3 Y_RNA.218-201ENST00000364218 104 ntBASIC1.72□□□□□ -2.13
CCDC113Q9H0I3 MIR759-201ENST00000390224 91 ntBASIC1.72□□□□□ -2.13
CCDC113Q9H0I3 RNU6-910P-201ENST00000390844 107 ntBASIC1.72□□□□□ -2.13
CCDC113Q9H0I3 MIR1323-201ENST00000408090 73 ntBASIC1.72□□□□□ -2.13
CCDC113Q9H0I3 AC090844.1-201ENST00000422019 156 ntBASIC1.72□□□□□ -2.13
CCDC113Q9H0I3 AL645939.4-201ENST00000604495 135 ntBASIC1.72□□□□□ -2.13
CCDC113Q9H0I3 AL157777.2-201ENST00000258070 137 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 Y_RNA.298-201ENST00000364960 107 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 SNORD116-14-201ENST00000383894 92 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 SNORD116-17-201ENST00000383929 92 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 SNORD116-15-201ENST00000384445 92 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 SNORD116-19-201ENST00000384729 92 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 MIR1302-7-201ENST00000408841 72 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 RNA5SP136-201ENST00000410906 107 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 Y_RNA.617-201ENST00000410920 90 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 POLR2J4-204ENST00000418424 324 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 SNORA70.22-201ENST00000517160 124 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 AP003716.2-201ENST00000528260 108 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.71□□□□□ -2.14
CCDC113Q9H0I3 SNORA80D-201ENST00000384488 135 ntBASIC1.7□□□□□ -2.14
CCDC113Q9H0I3 MIR222-201ENST00000384992 110 ntBASIC1.7□□□□□ -2.14
CCDC113Q9H0I3 RNU4-62P-201ENST00000410125 130 ntBASIC1.7□□□□□ -2.14
CCDC113Q9H0I3 AL591704.2-201ENST00000421658 181 ntBASIC1.7□□□□□ -2.14
CCDC113Q9H0I3 RNU7-107P-201ENST00000459121 61 ntBASIC1.7□□□□□ -2.14
CCDC113Q9H0I3 RNU6-1333P-201ENST00000516162 93 ntBASIC1.7□□□□□ -2.14
CCDC113Q9H0I3 RNU2-35P-201ENST00000516446 142 ntBASIC1.7□□□□□ -2.14
CCDC113Q9H0I3 RNY4P20-201ENST00000516678 93 ntBASIC1.7□□□□□ -2.14
CCDC113Q9H0I3 MIR6516-201ENST00000630554 81 ntBASIC1.7□□□□□ -2.14
CCDC113Q9H0I3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC113Q9H0I3 Y_RNA.127-201ENST00000363386 109 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 Y_RNA.171-201ENST00000363760 102 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 RNU6-60P-201ENST00000364792 103 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 MRPL35P3-201ENST00000421557 364 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 RNU7-123P-201ENST00000515911 60 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 RNU6-772P-201ENST00000516042 105 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 IGKV1-22-201ENST00000524313 326 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 AC004812.1-201ENST00000540773 146 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 AC025166.1-201ENST00000612411 163 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 SEPT14P17-201ENST00000617978 177 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 MIR6841-201ENST00000637129 72 ntBASIC1.69□□□□□ -2.14
CCDC113Q9H0I3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.68□□□□□ -2.14
CCDC113Q9H0I3 RNU6-22P-201ENST00000384355 107 ntBASIC1.68□□□□□ -2.14
CCDC113Q9H0I3 Y_RNA.528-201ENST00000384575 108 ntBASIC1.68□□□□□ -2.14
CCDC113Q9H0I3 Y_RNA.531-201ENST00000384589 121 ntBASIC1.68□□□□□ -2.14
CCDC113Q9H0I3 AL512326.2-201ENST00000426359 151 ntBASIC1.68□□□□□ -2.14
CCDC113Q9H0I3 RNA5SP458-201ENST00000516188 119 ntBASIC1.68□□□□□ -2.14
CCDC113Q9H0I3 RNU6-781P-201ENST00000516377 101 ntBASIC1.68□□□□□ -2.14
CCDC113Q9H0I3 RNA5SP33-201ENST00000516687 98 ntBASIC1.68□□□□□ -2.14
CCDC113Q9H0I3 MIR4264-201ENST00000583520 66 ntBASIC1.68□□□□□ -2.14
CCDC113Q9H0I3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
CCDC113Q9H0I3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 RNU1-42P-201ENST00000364033 160 ntBASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 SNORD58C-201ENST00000365223 64 ntBASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 Y_RNA.346-201ENST00000365385 112 ntBASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 MIR517C-201ENST00000385103 95 ntBASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 SNORD12C-201ENST00000386307 89 ntBASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 RNU6-205P-201ENST00000390858 107 ntBASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 RNA5SP237-201ENST00000410414 113 ntBASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 AC113410.1-201ENST00000505029 247 ntBASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 SNORD53B-201ENST00000577887 78 ntBASIC1.67□□□□□ -2.14
CCDC113Q9H0I3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.66□□□□□ -2.14
CCDC113Q9H0I3 MT-TN-201ENST00000387400 73 ntBASIC1.66□□□□□ -2.14
CCDC113Q9H0I3 RNU6-1154P-201ENST00000391001 104 ntBASIC1.66□□□□□ -2.14
CCDC113Q9H0I3 RNU6-955P-201ENST00000410497 104 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms