Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 RNA5SP94-201ENST00000516917 108 ntBASIC0.27□□□□□ -2.37
COMMD4Q9H0A8 MIR3678-201ENST00000578455 94 ntBASIC0.27□□□□□ -2.37
COMMD4Q9H0A8 Y_RNA.542-201ENST00000384641 111 ntBASIC0.26□□□□□ -2.37
COMMD4Q9H0A8 MIR518A1-201ENST00000385068 85 ntBASIC0.26□□□□□ -2.37
COMMD4Q9H0A8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
COMMD4Q9H0A8 RNA5SP237-201ENST00000410414 113 ntBASIC0.26□□□□□ -2.37
COMMD4Q9H0A8 RNA5SP247-201ENST00000411181 105 ntBASIC0.26□□□□□ -2.37
COMMD4Q9H0A8 SNORD71-201ENST00000411292 86 ntBASIC0.26□□□□□ -2.37
COMMD4Q9H0A8 RNU6-561P-201ENST00000516222 102 ntBASIC0.26□□□□□ -2.37
COMMD4Q9H0A8 AL442663.2-201ENST00000554385 511 ntBASIC0.26□□□□□ -2.37
COMMD4Q9H0A8 AC243829.6-201ENST00000612652 106 ntBASIC0.26□□□□□ -2.37
COMMD4Q9H0A8 uc_338.16-201ENST00000621804 95 ntBASIC0.26□□□□□ -2.37
COMMD4Q9H0A8 AL596211.1-201ENST00000569873 2277 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 MIR335-201ENST00000362173 94 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 RNU6-653P-201ENST00000363074 106 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 SNORD44.1-201ENST00000363202 61 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 Y_RNA.122-201ENST00000363331 96 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 Y_RNA.224-201ENST00000364308 111 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 Y_RNA.416-201ENST00000384014 113 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 Y_RNA.454-201ENST00000384224 113 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 RNU6-381P-201ENST00000391259 108 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 SNORA79-201ENST00000408376 140 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 Y_RNA.604-201ENST00000410574 102 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 RNU4-83P-201ENST00000410863 133 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 RPL39P25-201ENST00000449384 154 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 RNU6-635P-201ENST00000516651 102 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 AC022523.2-201ENST00000561045 150 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 MIR4711-201ENST00000578274 70 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 MIR3152-201ENST00000579801 74 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 MIR4282-201ENST00000583613 67 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 MIR5197-201ENST00000583721 112 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 AC091932.4-201ENST00000623386 200 ntBASIC0.25□□□□□ -2.37
COMMD4Q9H0A8 RNU6-238P-201ENST00000363313 106 ntBASIC0.24□□□□□ -2.37
COMMD4Q9H0A8 RNU6-728P-201ENST00000365375 104 ntBASIC0.24□□□□□ -2.37
COMMD4Q9H0A8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.24□□□□□ -2.37
COMMD4Q9H0A8 MIR1302-6-201ENST00000408466 90 ntBASIC0.24□□□□□ -2.37
COMMD4Q9H0A8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.24□□□□□ -2.37
COMMD4Q9H0A8 SNORA4-201ENST00000584302 138 ntBASIC0.24□□□□□ -2.37
COMMD4Q9H0A8 U6.104-201ENST00000637979 90 ntBASIC0.24□□□□□ -2.37
COMMD4Q9H0A8 Y_RNA.176-201ENST00000363815 109 ntBASIC0.23□□□□□ -2.37
COMMD4Q9H0A8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
COMMD4Q9H0A8 RNU6-597P-201ENST00000365620 102 ntBASIC0.23□□□□□ -2.37
COMMD4Q9H0A8 RNU6-1292P-201ENST00000383856 107 ntBASIC0.23□□□□□ -2.37
COMMD4Q9H0A8 RNU6-1227P-201ENST00000383981 107 ntBASIC0.23□□□□□ -2.37
COMMD4Q9H0A8 RNU6-1153P-201ENST00000516760 105 ntBASIC0.23□□□□□ -2.37
COMMD4Q9H0A8 SNORA25.18-201ENST00000607153 114 ntBASIC0.23□□□□□ -2.37
COMMD4Q9H0A8 MIR8066-201ENST00000617280 78 ntBASIC0.23□□□□□ -2.37
COMMD4Q9H0A8 AL662814.1-201ENST00000617364 121 ntBASIC0.23□□□□□ -2.37
COMMD4Q9H0A8 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
COMMD4Q9H0A8 Y_RNA.430-201ENST00000384081 110 ntBASIC0.22□□□□□ -2.37
COMMD4Q9H0A8 MT-TW-201ENST00000387382 68 ntBASIC0.22□□□□□ -2.37
COMMD4Q9H0A8 MIR936-201ENST00000401264 98 ntBASIC0.22□□□□□ -2.37
COMMD4Q9H0A8 SEPT7P4-201ENST00000437076 306 ntBASIC0.22□□□□□ -2.37
COMMD4Q9H0A8 SNRPGP12-201ENST00000449481 213 ntBASIC0.22□□□□□ -2.37
COMMD4Q9H0A8 MTATP8P1-201ENST00000467115 207 ntBASIC0.22□□□□□ -2.37
COMMD4Q9H0A8 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
COMMD4Q9H0A8 AC133485.4-201ENST00000561835 220 ntBASIC0.22□□□□□ -2.37
COMMD4Q9H0A8 MIR8062-201ENST00000621515 85 ntBASIC0.22□□□□□ -2.37
COMMD4Q9H0A8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 Y_RNA.42-201ENST00000362660 108 ntBASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 RNU4-17P-201ENST00000365598 141 ntBASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 Y_RNA.483-201ENST00000384380 101 ntBASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 SNORA20-201ENST00000384662 132 ntBASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 Y_RNA.567-201ENST00000384736 106 ntBASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 RNA5SP193-201ENST00000410353 107 ntBASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 Y_RNA.617-201ENST00000410920 90 ntBASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 RNU7-70P-201ENST00000516941 66 ntBASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.21□□□□□ -2.38
COMMD4Q9H0A8 AL589743.1-201ENST00000551932 2712 ntBASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 RNU6-403P-201ENST00000363163 104 ntBASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 Y_RNA.262-201ENST00000364641 102 ntBASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 Y_RNA.422-201ENST00000384054 114 ntBASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 Y_RNA.461-201ENST00000384263 103 ntBASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 U8.15-201ENST00000390947 134 ntBASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 RNU4-43P-201ENST00000410628 137 ntBASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 AL365205.2-201ENST00000594586 68 ntBASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 AL078603.1-201ENST00000603824 313 ntBASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.2□□□□□ -2.38
COMMD4Q9H0A8 Y_RNA.13-201ENST00000362403 112 ntBASIC0.19□□□□□ -2.38
COMMD4Q9H0A8 RNA5SP62-201ENST00000363457 110 ntBASIC0.19□□□□□ -2.38
COMMD4Q9H0A8 RNU6-103P-201ENST00000363686 107 ntBASIC0.19□□□□□ -2.38
COMMD4Q9H0A8 MIR644A-201ENST00000385262 94 ntBASIC0.19□□□□□ -2.38
COMMD4Q9H0A8 AL121914.1-201ENST00000450188 156 ntBASIC0.19□□□□□ -2.38
COMMD4Q9H0A8 RNU6-469P-201ENST00000516253 101 ntBASIC0.19□□□□□ -2.38
COMMD4Q9H0A8 RNA5SP220-201ENST00000516298 104 ntBASIC0.19□□□□□ -2.38
COMMD4Q9H0A8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.19□□□□□ -2.38
COMMD4Q9H0A8 AC141846.1-201ENST00000568348 142 ntBASIC0.19□□□□□ -2.38
COMMD4Q9H0A8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
COMMD4Q9H0A8 SNORA22.1-201ENST00000362701 134 ntBASIC0.18□□□□□ -2.38
COMMD4Q9H0A8 Y_RNA.676-201ENST00000516393 96 ntBASIC0.18□□□□□ -2.38
COMMD4Q9H0A8 Y_RNA.720-201ENST00000517166 92 ntBASIC0.18□□□□□ -2.38
COMMD4Q9H0A8 AP003327.1-201ENST00000529684 127 ntBASIC0.18□□□□□ -2.38
COMMD4Q9H0A8 MIR4643-201ENST00000577473 78 ntBASIC0.18□□□□□ -2.38
COMMD4Q9H0A8 MIR4744-201ENST00000581563 82 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 267.5 ms