Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC006210.1-201ENST00000424882 111 ntBASIC-0.97□□□□□ -2.56
UPF3BQ9BZI7 BX276092.1-201ENST00000427368 251 ntBASIC-0.97□□□□□ -2.56
UPF3BQ9BZI7 RNU7-104P-201ENST00000459398 79 ntBASIC-0.97□□□□□ -2.56
UPF3BQ9BZI7 SNORD77.4-201ENST00000516158 81 ntBASIC-0.97□□□□□ -2.56
UPF3BQ9BZI7 RNA5SP470-201ENST00000516463 106 ntBASIC-0.97□□□□□ -2.56
UPF3BQ9BZI7 SNORD38.3-201ENST00000516599 73 ntBASIC-0.97□□□□□ -2.56
UPF3BQ9BZI7 MIR4662B-201ENST00000579498 81 ntBASIC-0.97□□□□□ -2.56
UPF3BQ9BZI7 MIR3145-201ENST00000580727 82 ntBASIC-0.97□□□□□ -2.56
UPF3BQ9BZI7 MIR4499-201ENST00000584834 69 ntBASIC-0.97□□□□□ -2.56
UPF3BQ9BZI7 uc_338.19-201ENST00000616808 99 ntBASIC-0.97□□□□□ -2.56
UPF3BQ9BZI7 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 RNU6-888P-201ENST00000363010 101 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 SNORD114-3-201ENST00000364969 75 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 MIR516B1-201ENST00000385211 90 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 MIR548K-201ENST00000408406 116 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 RNU6-721P-201ENST00000410155 105 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 SCARNA17-201ENST00000516183 144 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 RNU6-531P-201ENST00000516694 104 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 RNU6-881P-201ENST00000516813 102 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 AL049861.1-201ENST00000603130 150 ntBASIC-0.98□□□□□ -2.57
UPF3BQ9BZI7 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.99□□□□□ -2.57
UPF3BQ9BZI7 RPS3AP52-201ENST00000435639 297 ntBASIC-0.99□□□□□ -2.57
UPF3BQ9BZI7 AF228730.3-201ENST00000436691 102 ntBASIC-0.99□□□□□ -2.57
UPF3BQ9BZI7 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.99□□□□□ -2.57
UPF3BQ9BZI7 MIR4324-201ENST00000584846 72 ntBASIC-0.99□□□□□ -2.57
UPF3BQ9BZI7 AC099654.14-201ENST00000638599 341 ntBASIC-0.99□□□□□ -2.57
UPF3BQ9BZI7 MIR302B-201ENST00000362188 73 ntBASIC-1□□□□□ -2.57
UPF3BQ9BZI7 MIR342-201ENST00000362212 99 ntBASIC-1□□□□□ -2.57
UPF3BQ9BZI7 RNU4-58P-201ENST00000363192 141 ntBASIC-1□□□□□ -2.57
UPF3BQ9BZI7 RNY1P13-201ENST00000365030 105 ntBASIC-1□□□□□ -2.57
UPF3BQ9BZI7 RNU6-144P-201ENST00000383951 107 ntBASIC-1□□□□□ -2.57
UPF3BQ9BZI7 SNORD56B-201ENST00000384713 71 ntBASIC-1□□□□□ -2.57
UPF3BQ9BZI7 Z99129.1-201ENST00000612510 255 ntBASIC-1□□□□□ -2.57
UPF3BQ9BZI7 U6.92-201ENST00000636464 89 ntBASIC-1□□□□□ -2.57
UPF3BQ9BZI7 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.01□□□□□ -2.57
UPF3BQ9BZI7 RNU6-455P-201ENST00000384681 107 ntBASIC-1.01□□□□□ -2.57
UPF3BQ9BZI7 RNU6-308P-201ENST00000390957 107 ntBASIC-1.01□□□□□ -2.57
UPF3BQ9BZI7 RNU6-126P-201ENST00000516685 103 ntBASIC-1.01□□□□□ -2.57
UPF3BQ9BZI7 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.01□□□□□ -2.57
UPF3BQ9BZI7 DEFB131E-201ENST00000532329 154 ntBASIC-1.01□□□□□ -2.57
UPF3BQ9BZI7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.01□□□□□ -2.57
UPF3BQ9BZI7 AC093726.3-201ENST00000637588 150 ntBASIC-1.01□□□□□ -2.57
UPF3BQ9BZI7 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 MIR548F5-201ENST00000408421 86 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 RPS29P25-201ENST00000481709 171 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 AC144568.1-201ENST00000520139 137 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 AC100767.1-201ENST00000528178 123 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 MIR3611-201ENST00000584484 83 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 AL356055.1-201ENST00000602528 446 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 PISRT1.1-201ENST00000616930 107 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 MIR6841-201ENST00000637129 72 ntBASIC-1.02□□□□□ -2.57
UPF3BQ9BZI7 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.03□□□□□ -2.57
UPF3BQ9BZI7 RNU6-899P-201ENST00000363947 107 ntBASIC-1.03□□□□□ -2.57
UPF3BQ9BZI7 RNU6-47P-201ENST00000383866 107 ntBASIC-1.03□□□□□ -2.57
UPF3BQ9BZI7 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.03□□□□□ -2.57
UPF3BQ9BZI7 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.03□□□□□ -2.57
UPF3BQ9BZI7 MIR204-201ENST00000385200 110 ntBASIC-1.03□□□□□ -2.57
UPF3BQ9BZI7 RNU6-383P-201ENST00000410864 94 ntBASIC-1.03□□□□□ -2.57
UPF3BQ9BZI7 RNA5SP484-201ENST00000458857 111 ntBASIC-1.03□□□□□ -2.57
UPF3BQ9BZI7 RNU7-4P-201ENST00000516961 62 ntBASIC-1.03□□□□□ -2.57
UPF3BQ9BZI7 MIR4280-201ENST00000582178 76 ntBASIC-1.03□□□□□ -2.57
UPF3BQ9BZI7 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 RNU6-509P-201ENST00000363519 107 ntBASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 RNU6-865P-201ENST00000364772 107 ntBASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 AC010655.3-201ENST00000478818 450 ntBASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 RNU6-911P-201ENST00000516523 104 ntBASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 RNU6-365P-201ENST00000517113 106 ntBASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 AC109635.3-201ENST00000529536 185 ntBASIC-1.04□□□□□ -2.58
UPF3BQ9BZI7 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.05□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.05□□□□□ -2.58
UPF3BQ9BZI7 SNORA18-201ENST00000384416 132 ntBASIC-1.05□□□□□ -2.58
UPF3BQ9BZI7 MIR9-2-201ENST00000384838 87 ntBASIC-1.05□□□□□ -2.58
UPF3BQ9BZI7 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.05□□□□□ -2.58
UPF3BQ9BZI7 RNU7-169P-201ENST00000459456 61 ntBASIC-1.05□□□□□ -2.58
UPF3BQ9BZI7 RNU6-274P-201ENST00000459566 107 ntBASIC-1.05□□□□□ -2.58
UPF3BQ9BZI7 RNU6-120P-201ENST00000516077 103 ntBASIC-1.05□□□□□ -2.58
UPF3BQ9BZI7 RN7SKP299-201ENST00000606679 301 ntBASIC-1.05□□□□□ -2.58
UPF3BQ9BZI7 RNA5SP133-201ENST00000363368 119 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 MIR626-201ENST00000385032 94 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 RNU7-188P-201ENST00000517063 64 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 AP003733.2-201ENST00000529409 171 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 AC015540.1-201ENST00000615828 501 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms