Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 HMGN2P5-201ENST00000436882 273 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 AC104389.3-201ENST00000445629 235 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 RNU6-303P-201ENST00000517091 106 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 AC107016.2-201ENST00000547968 190 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 AC005520.4-201ENST00000604337 90 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CNTNAP3Q9BZ76 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CNTNAP3Q9BZ76 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CNTNAP3Q9BZ76 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.9□□□□□ -1.94
CNTNAP3Q9BZ76 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 MIR22-201ENST00000362190 85 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 MIR148B-201ENST00000362252 99 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 RNU1-58P-201ENST00000362413 163 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 RNU1-70P-201ENST00000362618 164 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 SNORD56.3-201ENST00000363507 71 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 RNU6-1019P-201ENST00000364424 107 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 SNORA9.2-201ENST00000365361 133 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 RNU6-950P-201ENST00000384651 107 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 SNORA67.4-201ENST00000384688 142 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 SNORD15B-201ENST00000384714 146 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 MIR512-1-201ENST00000384913 84 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 AC093423.1-201ENST00000440817 142 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 RNA5SP380-201ENST00000517190 98 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 RNU7-156P-201ENST00000517214 74 ntBASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CNTNAP3Q9BZ76 Y_RNA.264-201ENST00000364665 102 ntBASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 RNU6-811P-201ENST00000384069 107 ntBASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 MIR136-201ENST00000385207 82 ntBASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 RNU6-1053P-201ENST00000515930 101 ntBASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 SNORA18.5-201ENST00000516616 101 ntBASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 RNA5SP168-201ENST00000516642 112 ntBASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CNTNAP3Q9BZ76 MAPK10-266ENST00000641066 6555 ntBASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 Y_RNA.354-201ENST00000365448 111 ntBASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 Y_RNA.537-201ENST00000384626 109 ntBASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 MIR452-201ENST00000385020 85 ntBASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 snoU13.16-201ENST00000459350 104 ntBASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 AC005908.1-201ENST00000468701 347 ntBASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 MIR3126-201ENST00000577443 74 ntBASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 MIR4648-201ENST00000580107 72 ntBASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 Z97988.1-201ENST00000637697 135 ntBASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CNTNAP3Q9BZ76 SNORD115-3-201ENST00000363100 82 ntBASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 RNA5SP68-201ENST00000363885 119 ntBASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 RNY1P13-201ENST00000365030 105 ntBASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 Z96811.1-201ENST00000445880 108 ntBASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 SNRPGP12-201ENST00000449481 213 ntBASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 SNORD123-201ENST00000459473 70 ntBASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 RPS29P11-201ENST00000496507 171 ntBASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 MIR6817-201ENST00000615588 66 ntBASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 AC022513.1-201ENST00000624512 117 ntBASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.87□□□□□ -1.95
CNTNAP3Q9BZ76 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 SNORA38-201ENST00000363946 132 ntBASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 SNORD67-201ENST00000390833 111 ntBASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 RPL23AP6-201ENST00000446637 472 ntBASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 AC093850.1-201ENST00000454121 251 ntBASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 RNU7-12P-201ENST00000516030 62 ntBASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 AC245166.1-201ENST00000521012 253 ntBASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 SNORD14A-201ENST00000606526 91 ntBASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 AC067747.1-201ENST00000608026 250 ntBASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 AC073476.4-201ENST00000628409 72 ntBASIC2.86□□□□□ -1.95
CNTNAP3Q9BZ76 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 RNU6-208P-201ENST00000362431 107 ntBASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 RNU1-91P-201ENST00000364746 163 ntBASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 MIR154-201ENST00000385243 84 ntBASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 RNU6-205P-201ENST00000390858 107 ntBASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 AC244636.1-201ENST00000421152 228 ntBASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 HSPE1P9-201ENST00000440046 311 ntBASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 AP000753.3-201ENST00000604083 169 ntBASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP3Q9BZ76 AL034345.1-201ENST00000407768 123 ntBASIC2.84□□□□□ -1.95
CNTNAP3Q9BZ76 HMGN2P23-201ENST00000456759 269 ntBASIC2.84□□□□□ -1.95
CNTNAP3Q9BZ76 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.84□□□□□ -1.95
CNTNAP3Q9BZ76 RN7SL499P-201ENST00000481141 276 ntBASIC2.84□□□□□ -1.95
CNTNAP3Q9BZ76 RNA5SP148-201ENST00000516527 94 ntBASIC2.84□□□□□ -1.95
CNTNAP3Q9BZ76 RNU6-859P-201ENST00000362728 107 ntBASIC2.83□□□□□ -1.96
CNTNAP3Q9BZ76 RNY1P2-201ENST00000364820 117 ntBASIC2.83□□□□□ -1.96
CNTNAP3Q9BZ76 RNU6-132P-201ENST00000383863 107 ntBASIC2.83□□□□□ -1.96
CNTNAP3Q9BZ76 MIR3064-201ENST00000581130 66 ntBASIC2.83□□□□□ -1.96
CNTNAP3Q9BZ76 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.83□□□□□ -1.96
CNTNAP3Q9BZ76 uc_338.1-201ENST00000612113 180 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms