Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MIR4276-201ENST00000584832 70 ntBASIC2.29□□□□□ -2.04
SSBP4Q9BWG4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
SSBP4Q9BWG4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SSBP4Q9BWG4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SSBP4Q9BWG4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 Y_RNA.12-201ENST00000362393 112 ntBASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 SNORA5A-201ENST00000384111 134 ntBASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 RNU6-987P-201ENST00000384759 104 ntBASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 MIR588-201ENST00000384900 83 ntBASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 SNORA48.7-201ENST00000391302 135 ntBASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 RN7SL20P-201ENST00000488827 297 ntBASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 RNA5SP445-201ENST00000515889 115 ntBASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 RNU7-41P-201ENST00000515917 61 ntBASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SSBP4Q9BWG4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 SNORA8.1-201ENST00000384250 140 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 RNU1-148P-201ENST00000384472 162 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 RNU6-1241P-201ENST00000384536 107 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 RNU6-663P-201ENST00000391105 106 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 MTND4LP19-201ENST00000403051 166 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 AC105272.1-201ENST00000438604 198 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 AC245517.4-201ENST00000448601 281 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 AC009474.2-201ENST00000451383 136 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 RNU7-26P-201ENST00000458980 63 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 SNORA84-201ENST00000459229 133 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 RNU6-75P-201ENST00000515944 104 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 YWHAEP2-201ENST00000580066 112 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 YWHAEP3-201ENST00000582767 121 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 SNORA4-201ENST00000584302 138 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 AL121772.2-201ENST00000614331 297 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 AL035425.3-201ENST00000564206 4996 ntBASIC2.27□□□□□ -2.05
SSBP4Q9BWG4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 MIRLET7F1-201ENST00000362202 87 ntBASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 RNA5SP124-201ENST00000362739 110 ntBASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 RNU6-471P-201ENST00000383944 106 ntBASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 MIR518A2-201ENST00000384966 87 ntBASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 RNU4-37P-201ENST00000410214 84 ntBASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 RNA5SP501-201ENST00000410990 112 ntBASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 AC092427.1-202ENST00000430569 476 ntBASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 AC093423.1-201ENST00000440817 142 ntBASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 RN7SL542P-201ENST00000467147 294 ntBASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
SSBP4Q9BWG4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 RNA5SP48-201ENST00000363969 126 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 MIR218-2-201ENST00000385006 110 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 AC244023.1-201ENST00000426884 112 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 RPS29P6-201ENST00000438196 145 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 SNORA59A-201ENST00000459326 152 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 AC091153.1-201ENST00000466297 402 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 SNORA67.7-201ENST00000516664 135 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 AC023632.4-201ENST00000517783 191 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 AC121758.2-201ENST00000553271 193 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 AC006023.1-201ENST00000603944 259 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 AC242498.1-201ENST00000604134 111 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 AC034229.5-201ENST00000624258 185 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 MIR622-201ENST00000638396 96 ntBASIC2.25□□□□□ -2.05
SSBP4Q9BWG4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SSBP4Q9BWG4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
SSBP4Q9BWG4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SSBP4Q9BWG4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SSBP4Q9BWG4 RNU6ATAC-201ENST00000408749 126 ntBASIC2.24□□□□□ -2.05
SSBP4Q9BWG4 MIR3158-1-201ENST00000583596 81 ntBASIC2.24□□□□□ -2.05
SSBP4Q9BWG4 UBL5P2-201ENST00000583788 219 ntBASIC2.24□□□□□ -2.05
SSBP4Q9BWG4 AC093010.3-201ENST00000570269 15214 ntBASIC2.24□□□□□ -2.05
SSBP4Q9BWG4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 SNORA7.4-201ENST00000384249 137 ntBASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 SNORD15B-201ENST00000384714 146 ntBASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 MIR23B-201ENST00000384832 97 ntBASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 MIR518E-201ENST00000385252 88 ntBASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 DEFB122-202ENST00000569013 197 ntBASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 MIR4429-201ENST00000580105 73 ntBASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 MIR4444-1-201ENST00000581696 74 ntBASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 MIR4444-2-201ENST00000584390 74 ntBASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SSBP4Q9BWG4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SSBP4Q9BWG4 SNORA67.1-201ENST00000364749 141 ntBASIC2.22□□□□□ -2.05
SSBP4Q9BWG4 RNU1-51P-201ENST00000365345 176 ntBASIC2.22□□□□□ -2.05
SSBP4Q9BWG4 SNORA67.4-201ENST00000384688 142 ntBASIC2.22□□□□□ -2.05
SSBP4Q9BWG4 MIR554-201ENST00000384874 96 ntBASIC2.22□□□□□ -2.05
SSBP4Q9BWG4 MIR563-201ENST00000385080 79 ntBASIC2.22□□□□□ -2.05
SSBP4Q9BWG4 AC107016.2-201ENST00000547968 190 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms