Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-998P-201ENST00000515894 101 ntBASIC-1.53□□□□□ -2.66
COL12A1Q99715 RNU6-344P-201ENST00000516635 111 ntBASIC-1.53□□□□□ -2.66
COL12A1Q99715 RNU6-458P-201ENST00000384179 107 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 SNORD116-23-201ENST00000384645 92 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 AF228730.4-201ENST00000421457 183 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 RNU7-88P-201ENST00000458752 63 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 SUMO2P5-201ENST00000506790 245 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 RNU6-531P-201ENST00000516694 104 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 MTATP6P2-201ENST00000603319 678 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 U6.58-201ENST00000613107 107 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 RNU6-97P-201ENST00000363387 104 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 RNU6-266P-201ENST00000364225 107 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 AC012306.1-201ENST00000423267 114 ntBASIC-1.54□□□□□ -2.66
COL12A1Q99715 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.54□□□□□ -2.66
COL12A1Q99715 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.55□□□□□ -2.66
COL12A1Q99715 AC114878.1-201ENST00000441166 358 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 AC091179.3-201ENST00000474761 144 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 RNU6-430P-201ENST00000517078 107 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 AP000907.4-201ENST00000604143 237 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 U6.42-201ENST00000618440 107 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.55□□□□□ -2.66
COL12A1Q99715 MTND5P42-201ENST00000637720 498 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 SNORD115-39-201ENST00000363694 82 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 SNORD50B-201ENST00000364995 70 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 RNU6-696P-201ENST00000390834 107 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 AC008628.2-201ENST00000502605 298 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 AC005972.2-201ENST00000604690 348 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 RNU6-609P-201ENST00000365459 107 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 AC013734.1-201ENST00000619329 111 ntBASIC-1.55□□□□□ -2.66
COL12A1Q99715 SNORD14E-201ENST00000364009 85 ntBASIC-1.56□□□□□ -2.66
COL12A1Q99715 SNORA51.5-201ENST00000384126 131 ntBASIC-1.56□□□□□ -2.66
COL12A1Q99715 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.56□□□□□ -2.66
COL12A1Q99715 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.56□□□□□ -2.66
COL12A1Q99715 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.56□□□□□ -2.66
COL12A1Q99715 RNU6-246P-201ENST00000384702 107 ntBASIC-1.56□□□□□ -2.66
COL12A1Q99715 MIR3941-201ENST00000582572 103 ntBASIC-1.56□□□□□ -2.66
COL12A1Q99715 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-1.57□□□□□ -2.66
COL12A1Q99715 SNORD115-45-201ENST00000391078 81 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 RNU2-39P-201ENST00000410604 198 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.57□□□□□ -2.66
COL12A1Q99715 AC093899.1-201ENST00000457984 376 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 AL133153.1-201ENST00000557756 303 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 AC127459.3-201ENST00000624328 466 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 MIR581-201ENST00000384895 96 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 RNU6-550P-201ENST00000391057 101 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 RNU6-719P-201ENST00000516671 104 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 AC087752.4-201ENST00000605911 462 ntBASIC-1.57□□□□□ -2.66
COL12A1Q99715 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 RNU6-692P-201ENST00000384496 107 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 MIR548N-201ENST00000408742 75 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 RNU4-18P-201ENST00000516751 149 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.58□□□□□ -2.66
COL12A1Q99715 SNORD115-5-201ENST00000363633 82 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 SNORD115-1-201ENST00000364961 82 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 TRAJ51-201ENST00000504127 63 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 AC010598.1-201ENST00000510378 103 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.58□□□□□ -2.66
COL12A1Q99715 SCOCP1-201ENST00000554676 349 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 RNU6-777P-201ENST00000364265 104 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 RNU6-282P-201ENST00000365357 103 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 MIR421-201ENST00000365696 85 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 MIR16-1-201ENST00000385271 89 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 RNU6-325P-201ENST00000411132 105 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 ELOCP4-201ENST00000420090 333 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 RNU6-377P-201ENST00000515965 102 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 AC139792.3-201ENST00000623525 224 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 AC008873.1-201ENST00000625051 138 ntBASIC-1.58□□□□□ -2.66
COL12A1Q99715 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-1.59□□□□□ -2.66
COL12A1Q99715 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.59□□□□□ -2.66
COL12A1Q99715 MTND1P2-201ENST00000430604 821 ntBASIC-1.59□□□□□ -2.66
COL12A1Q99715 RNU6-329P-201ENST00000459618 107 ntBASIC-1.59□□□□□ -2.66
COL12A1Q99715 AC104563.1-201ENST00000476147 376 ntBASIC-1.59□□□□□ -2.66
COL12A1Q99715 MIR513B-201ENST00000385136 84 ntBASIC-1.59□□□□□ -2.66
COL12A1Q99715 MTCO2P27-201ENST00000420740 428 ntBASIC-1.59□□□□□ -2.66
COL12A1Q99715 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.59□□□□□ -2.66
COL12A1Q99715 SNORD116-25-201ENST00000516517 92 ntBASIC-1.59□□□□□ -2.66
COL12A1Q99715 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.59□□□□□ -2.66
COL12A1Q99715 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.6□□□□□ -2.66
COL12A1Q99715 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.6□□□□□ -2.66
COL12A1Q99715 RNU4-85P-201ENST00000364675 123 ntBASIC-1.6□□□□□ -2.66
COL12A1Q99715 MIR521-2-201ENST00000384818 87 ntBASIC-1.6□□□□□ -2.66
COL12A1Q99715 RNU7-53P-201ENST00000516705 60 ntBASIC-1.6□□□□□ -2.66
COL12A1Q99715 AL669831.3-213ENST00000636676 183 ntBASIC-1.6□□□□□ -2.66
COL12A1Q99715 RNU6-645P-201ENST00000364649 106 ntBASIC-1.6□□□□□ -2.67
COL12A1Q99715 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.6□□□□□ -2.67
COL12A1Q99715 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.6□□□□□ -2.67
COL12A1Q99715 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
COL12A1Q99715 HIF1AP1-201ENST00000553642 175 ntBASIC-1.6□□□□□ -2.67
COL12A1Q99715 SNORD11B-201ENST00000607707 90 ntBASIC-1.6□□□□□ -2.67
COL12A1Q99715 AC007671.2-201ENST00000637344 619 ntBASIC-1.6□□□□□ -2.67
COL12A1Q99715 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.6□□□□□ -2.67
COL12A1Q99715 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.6□□□□□ -2.67
COL12A1Q99715 RNU6-530P-201ENST00000391180 107 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms