Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LRCH3Q96II8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.24□□□□□ -1.89
LRCH3Q96II8 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
LRCH3Q96II8 RNU6-132P-201ENST00000383863 107 ntBASIC3.24□□□□□ -1.89
LRCH3Q96II8 AC019129.1-201ENST00000403786 261 ntBASIC3.24□□□□□ -1.89
LRCH3Q96II8 RNA5SP237-201ENST00000410414 113 ntBASIC3.24□□□□□ -1.89
LRCH3Q96II8 HSPE1P24-201ENST00000450782 238 ntBASIC3.24□□□□□ -1.89
LRCH3Q96II8 AC023790.1-201ENST00000482174 347 ntBASIC3.24□□□□□ -1.89
LRCH3Q96II8 SCARNA20.6-201ENST00000517251 106 ntBASIC3.24□□□□□ -1.89
LRCH3Q96II8 MIR4500-201ENST00000579472 76 ntBASIC3.24□□□□□ -1.89
LRCH3Q96II8 MIR4536-1-201ENST00000583537 88 ntBASIC3.24□□□□□ -1.89
LRCH3Q96II8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LRCH3Q96II8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRCH3Q96II8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRCH3Q96II8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LRCH3Q96II8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.23□□□□□ -1.89
LRCH3Q96II8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.23□□□□□ -1.89
LRCH3Q96II8 RNU6-208P-201ENST00000362431 107 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 RNU6-461P-201ENST00000364195 107 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 Y_RNA.264-201ENST00000364665 102 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 SNORD21-201ENST00000383953 95 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 BX510359.4-201ENST00000423750 193 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRCH3Q96II8 RNU1-143P-201ENST00000516296 146 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 AC026271.5-201ENST00000577873 130 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 MIR548AO-201ENST00000579992 96 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 MIR3064-201ENST00000581130 66 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 AC104996.3-201ENST00000590718 94 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 U1.23-201ENST00000610293 146 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 RNU1-68P-201ENST00000615382 146 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 U1.39-201ENST00000621562 146 ntBASIC3.23□□□□□ -1.89
LRCH3Q96II8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LRCH3Q96II8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.22□□□□□ -1.89
LRCH3Q96II8 MIR148B-201ENST00000362252 99 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 RNA5SP68-201ENST00000363885 119 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 Y_RNA.338-201ENST00000365320 114 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 RNU6-1241P-201ENST00000384536 107 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 RNU6-296P-201ENST00000384608 107 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 MIR1287-201ENST00000408492 90 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 RNA5SP445-201ENST00000515889 115 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 RNU7-43P-201ENST00000516554 64 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 AC107016.2-201ENST00000547968 190 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 AC138749.4-201ENST00000563970 127 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 AC022202.1-201ENST00000613515 211 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 MIR6817-201ENST00000615588 66 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 AL662814.1-201ENST00000617364 121 ntBASIC3.22□□□□□ -1.89
LRCH3Q96II8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRCH3Q96II8 SNORD115-31-201ENST00000365318 82 ntBASIC3.21□□□□□ -1.9
LRCH3Q96II8 RNU6-805P-201ENST00000365643 106 ntBASIC3.21□□□□□ -1.9
LRCH3Q96II8 RNU6-571P-201ENST00000384128 107 ntBASIC3.21□□□□□ -1.9
LRCH3Q96II8 RNU6-663P-201ENST00000391105 106 ntBASIC3.21□□□□□ -1.9
LRCH3Q96II8 RNU6-75P-201ENST00000515944 104 ntBASIC3.21□□□□□ -1.9
LRCH3Q96II8 AC067747.1-201ENST00000608026 250 ntBASIC3.21□□□□□ -1.9
LRCH3Q96II8 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.21□□□□□ -1.9
LRCH3Q96II8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LRCH3Q96II8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LRCH3Q96II8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.2□□□□□ -1.9
LRCH3Q96II8 RNA5SP383-201ENST00000362934 120 ntBASIC3.2□□□□□ -1.9
LRCH3Q96II8 RNU6-949P-201ENST00000384040 107 ntBASIC3.2□□□□□ -1.9
LRCH3Q96II8 SNORD38B-201ENST00000384690 67 ntBASIC3.2□□□□□ -1.9
LRCH3Q96II8 AL023284.1-201ENST00000403956 276 ntBASIC3.2□□□□□ -1.9
LRCH3Q96II8 BX276092.1-201ENST00000427368 251 ntBASIC3.2□□□□□ -1.9
LRCH3Q96II8 AC015818.7-201ENST00000428754 109 ntBASIC3.2□□□□□ -1.9
LRCH3Q96II8 RNA5SP148-201ENST00000516527 94 ntBASIC3.2□□□□□ -1.9
LRCH3Q96II8 MIR4764-201ENST00000580680 88 ntBASIC3.2□□□□□ -1.9
LRCH3Q96II8 SNORD38B-202ENST00000625943 69 ntBASIC3.2□□□□□ -1.9
LRCH3Q96II8 WWP1P1-201ENST00000466609 2769 ntBASIC3.2□□□□□ -1.9
LRCH3Q96II8 AL161722.3-201ENST00000605789 2983 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 Y_RNA.491-201ENST00000384417 107 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 MIR512-1-201ENST00000384913 84 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 MIR597-201ENST00000384968 97 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 MIR29C-201ENST00000385231 88 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 MIR154-201ENST00000385243 84 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 RPS27P29-201ENST00000463110 252 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 AC099513.1-201ENST00000490423 301 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 RNA5SP437-201ENST00000517249 129 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 AC046143.2-201ENST00000609789 160 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
LRCH3Q96II8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRCH3Q96II8 RNU6-859P-201ENST00000362728 107 ntBASIC3.18□□□□□ -1.9
LRCH3Q96II8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LRCH3Q96II8 RNU7-156P-201ENST00000517214 74 ntBASIC3.18□□□□□ -1.9
LRCH3Q96II8 MIR3616-201ENST00000584070 92 ntBASIC3.18□□□□□ -1.9
LRCH3Q96II8 AL353997.5-201ENST00000618886 171 ntBASIC3.18□□□□□ -1.9
LRCH3Q96II8 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
LRCH3Q96II8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRCH3Q96II8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.18□□□□□ -1.9
LRCH3Q96II8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRCH3Q96II8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.17□□□□□ -1.9
LRCH3Q96II8 AC093010.3-201ENST00000570269 15214 ntBASIC3.17□□□□□ -1.9
LRCH3Q96II8 SNORD36A-201ENST00000362874 73 ntBASIC3.17□□□□□ -1.9
LRCH3Q96II8 Y_RNA.283-201ENST00000364798 112 ntBASIC3.17□□□□□ -1.9
LRCH3Q96II8 SNORD90-201ENST00000391145 111 ntBASIC3.17□□□□□ -1.9
LRCH3Q96II8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.17□□□□□ -1.9
LRCH3Q96II8 AC011753.1-201ENST00000451001 220 ntBASIC3.17□□□□□ -1.9
LRCH3Q96II8 MIR4709-201ENST00000577272 72 ntBASIC3.17□□□□□ -1.9
LRCH3Q96II8 U6.109-201ENST00000636749 87 ntBASIC3.17□□□□□ -1.9
LRCH3Q96II8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.17□□□□□ -1.9
LRCH3Q96II8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRCH3Q96II8 MAPK10-266ENST00000641066 6555 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms