Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CTHRC1Q96CG8 Y_RNA.218-201ENST00000364218 104 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 RNU4-16P-201ENST00000364737 141 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 Y_RNA.280-201ENST00000364765 112 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 RNA5SP363-201ENST00000365072 115 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 Y_RNA.366-201ENST00000365540 102 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 SNORD116-14-201ENST00000383894 92 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 SNORD116-17-201ENST00000383929 92 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 SNORD116-15-201ENST00000384445 92 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 SNORD38B-201ENST00000384690 67 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 SNORD116-19-201ENST00000384729 92 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 RNU4-62P-201ENST00000410125 130 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 AL022718.1-201ENST00000412004 84 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 RNU7-45P-201ENST00000459460 63 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 RNU6-1061P-201ENST00000516530 99 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 RNU6-1234P-201ENST00000516877 103 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 MIR4305-201ENST00000583252 102 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 SNORD38B-202ENST00000625943 69 ntBASIC1.41□□□□□ -2.18
CTHRC1Q96CG8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 Y_RNA.127-201ENST00000363386 109 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 RNU6-396P-201ENST00000365369 105 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 Y_RNA.430-201ENST00000384081 110 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 RNU6-22P-201ENST00000384355 107 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 AC245047.7-201ENST00000440265 293 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 RNU7-164P-201ENST00000459221 62 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 RNU11-2P-201ENST00000516898 142 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 AC108081.1-201ENST00000604358 221 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 MIR8065-201ENST00000620577 100 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 Z97988.1-201ENST00000637697 135 ntBASIC1.4□□□□□ -2.19
CTHRC1Q96CG8 SNORA25.3-201ENST00000363205 127 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 Y_RNA.226-201ENST00000364337 114 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 SNORA26.6-201ENST00000391256 115 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 MIR1263-201ENST00000408324 86 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 RNA5SP136-201ENST00000410906 107 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 Y_RNA.617-201ENST00000410920 90 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 SNORA31.4-201ENST00000516049 129 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 RNU6-165P-201ENST00000517170 99 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 MIR4498-201ENST00000577599 66 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 AL645939.4-201ENST00000604495 135 ntBASIC1.39□□□□□ -2.19
CTHRC1Q96CG8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 SNORA22.1-201ENST00000362701 134 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 RNA5SP264-201ENST00000363115 107 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 RNU6-1081P-201ENST00000384537 107 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 MIR759-201ENST00000390224 91 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 MIR1287-201ENST00000408492 90 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 BTF3P4-201ENST00000418852 495 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 HMGN1P33-201ENST00000432945 451 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 RNU6-1333P-201ENST00000516162 93 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 RNU6-313P-201ENST00000516317 112 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 MIR548AI-201ENST00000579940 88 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 MIR7111-201ENST00000619751 72 ntBASIC1.38□□□□□ -2.19
CTHRC1Q96CG8 MIR103A2-201ENST00000362154 78 ntBASIC1.37□□□□□ -2.19
CTHRC1Q96CG8 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
CTHRC1Q96CG8 Y_RNA.298-201ENST00000364960 107 ntBASIC1.37□□□□□ -2.19
CTHRC1Q96CG8 Y_RNA.346-201ENST00000365385 112 ntBASIC1.37□□□□□ -2.19
CTHRC1Q96CG8 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
CTHRC1Q96CG8 RNA5SP144-201ENST00000410846 116 ntBASIC1.37□□□□□ -2.19
CTHRC1Q96CG8 AP1B1P2-201ENST00000416196 106 ntBASIC1.37□□□□□ -2.19
CTHRC1Q96CG8 RNU6-479P-201ENST00000516348 105 ntBASIC1.37□□□□□ -2.19
CTHRC1Q96CG8 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
CTHRC1Q96CG8 MIR4781-201ENST00000585250 76 ntBASIC1.37□□□□□ -2.19
CTHRC1Q96CG8 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 SNORD58C-201ENST00000365223 64 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 RNU6-1168P-201ENST00000390831 104 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 RNU6-1154P-201ENST00000391001 104 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 RNU6-1190P-201ENST00000410811 104 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 RNU7-107P-201ENST00000459121 61 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 RNU6-772P-201ENST00000516042 105 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 RNU6-659P-201ENST00000516454 104 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 MIR2115-201ENST00000516657 100 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 PRELID3BP2-201ENST00000605362 201 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 AL365222.1-201ENST00000614661 98 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.36□□□□□ -2.19
CTHRC1Q96CG8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 MIR337-201ENST00000362281 93 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 RNU6-602P-201ENST00000411155 105 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 POLR2J4-204ENST00000418424 324 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 RNU7-113P-201ENST00000459273 62 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 Y_RNA.712-201ENST00000517011 92 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 AL359881.1-201ENST00000602916 267 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 AP000753.3-201ENST00000604083 169 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 AL512598.1-201ENST00000610158 273 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 AC025166.1-201ENST00000612411 163 ntBASIC1.35□□□□□ -2.19
CTHRC1Q96CG8 Y_RNA.528-201ENST00000384575 108 ntBASIC1.34□□□□□ -2.19
CTHRC1Q96CG8 Y_RNA.531-201ENST00000384589 121 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 346.4 ms