Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 MIR144-201ENST00000384886 86 ntBASIC2.54□□□□□ -2
SCG3Q8WXD2 MIR27B-201ENST00000385129 97 ntBASIC2.54□□□□□ -2
SCG3Q8WXD2 JTBP1-201ENST00000441314 247 ntBASIC2.54□□□□□ -2
SCG3Q8WXD2 RN7SKP12-201ENST00000516275 143 ntBASIC2.54□□□□□ -2
SCG3Q8WXD2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.54□□□□□ -2
SCG3Q8WXD2 MIR4439-201ENST00000583746 80 ntBASIC2.54□□□□□ -2
SCG3Q8WXD2 MIR6895-201ENST00000613497 78 ntBASIC2.54□□□□□ -2
SCG3Q8WXD2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2
SCG3Q8WXD2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
SCG3Q8WXD2 MIR206-201ENST00000384872 86 ntBASIC2.53□□□□□ -2
SCG3Q8WXD2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.53□□□□□ -2
SCG3Q8WXD2 Y_RNA.705-201ENST00000516862 110 ntBASIC2.53□□□□□ -2
SCG3Q8WXD2 MIR3935-201ENST00000583472 104 ntBASIC2.53□□□□□ -2
SCG3Q8WXD2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.53□□□□□ -2
SCG3Q8WXD2 AC016717.2-201ENST00000609089 5141 ntBASIC2.53□□□□□ -2.01
SCG3Q8WXD2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.52□□□□□ -2.01
SCG3Q8WXD2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCG3Q8WXD2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SCG3Q8WXD2 SNORD38B-201ENST00000384690 67 ntBASIC2.52□□□□□ -2.01
SCG3Q8WXD2 MIR513A1-201ENST00000385138 129 ntBASIC2.52□□□□□ -2.01
SCG3Q8WXD2 RNU6-1086P-201ENST00000410930 100 ntBASIC2.52□□□□□ -2.01
SCG3Q8WXD2 AC008413.1-201ENST00000511864 177 ntBASIC2.52□□□□□ -2.01
SCG3Q8WXD2 RNU7-41P-201ENST00000515917 61 ntBASIC2.52□□□□□ -2.01
SCG3Q8WXD2 RNU7-79P-201ENST00000516082 62 ntBASIC2.52□□□□□ -2.01
SCG3Q8WXD2 RNU6-162P-201ENST00000516228 103 ntBASIC2.52□□□□□ -2.01
SCG3Q8WXD2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.52□□□□□ -2.01
SCG3Q8WXD2 MIR3945-201ENST00000581853 98 ntBASIC2.52□□□□□ -2.01
SCG3Q8WXD2 SNORD38B-202ENST00000625943 69 ntBASIC2.52□□□□□ -2.01
SCG3Q8WXD2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCG3Q8WXD2 RNA5SP276-201ENST00000362580 94 ntBASIC2.51□□□□□ -2.01
SCG3Q8WXD2 RNA5SP259-201ENST00000365541 109 ntBASIC2.51□□□□□ -2.01
SCG3Q8WXD2 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.51□□□□□ -2.01
SCG3Q8WXD2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.51□□□□□ -2.01
SCG3Q8WXD2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SCG3Q8WXD2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SCG3Q8WXD2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCG3Q8WXD2 RNU6-972P-201ENST00000391208 107 ntBASIC2.5□□□□□ -2.01
SCG3Q8WXD2 RNU6-887P-201ENST00000410660 100 ntBASIC2.5□□□□□ -2.01
SCG3Q8WXD2 AC090844.1-201ENST00000422019 156 ntBASIC2.5□□□□□ -2.01
SCG3Q8WXD2 UBL5P1-201ENST00000507979 193 ntBASIC2.5□□□□□ -2.01
SCG3Q8WXD2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SCG3Q8WXD2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.5□□□□□ -2.01
SCG3Q8WXD2 RNA5SP173-201ENST00000364857 136 ntBASIC2.49□□□□□ -2.01
SCG3Q8WXD2 Y_RNA.467-201ENST00000384297 102 ntBASIC2.49□□□□□ -2.01
SCG3Q8WXD2 RNU2-40P-201ENST00000410833 196 ntBASIC2.49□□□□□ -2.01
SCG3Q8WXD2 BTF3P4-201ENST00000418852 495 ntBASIC2.49□□□□□ -2.01
SCG3Q8WXD2 RNA5SP24-201ENST00000516478 95 ntBASIC2.49□□□□□ -2.01
SCG3Q8WXD2 SNORD67.1-201ENST00000516618 108 ntBASIC2.49□□□□□ -2.01
SCG3Q8WXD2 RNU6-1006P-201ENST00000516998 103 ntBASIC2.49□□□□□ -2.01
SCG3Q8WXD2 AC022254.1-201ENST00000567857 235 ntBASIC2.49□□□□□ -2.01
SCG3Q8WXD2 SNORD53-201ENST00000579969 78 ntBASIC2.49□□□□□ -2.01
SCG3Q8WXD2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.49□□□□□ -2.01
SCG3Q8WXD2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SCG3Q8WXD2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCG3Q8WXD2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.48□□□□□ -2.01
SCG3Q8WXD2 Y_RNA.17-201ENST00000362433 111 ntBASIC2.48□□□□□ -2.01
SCG3Q8WXD2 SNORD114-10-201ENST00000363409 72 ntBASIC2.48□□□□□ -2.01
SCG3Q8WXD2 SNORD38.1-201ENST00000363863 68 ntBASIC2.48□□□□□ -2.01
SCG3Q8WXD2 RNA5SP48-201ENST00000363969 126 ntBASIC2.48□□□□□ -2.01
SCG3Q8WXD2 Y_RNA.593-201ENST00000410292 98 ntBASIC2.48□□□□□ -2.01
SCG3Q8WXD2 RPL31P63-201ENST00000422565 375 ntBASIC2.48□□□□□ -2.01
SCG3Q8WXD2 SNORD111.1-201ENST00000516421 86 ntBASIC2.48□□□□□ -2.01
SCG3Q8WXD2 MIR376B-201ENST00000614515 100 ntBASIC2.48□□□□□ -2.01
SCG3Q8WXD2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SCG3Q8WXD2 MIR494-201ENST00000349529 81 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 Y_RNA.140-201ENST00000363474 103 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 SNORA6-201ENST00000384033 151 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 SNORA70B-201ENST00000384210 135 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-1152P-201ENST00000384576 107 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-1307P-201ENST00000391012 103 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 AC019129.1-201ENST00000403786 261 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-447P-201ENST00000410293 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-1118P-201ENST00000410382 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-1076P-201ENST00000410397 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-355P-201ENST00000410427 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-791P-201ENST00000410467 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-705P-201ENST00000410601 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-1100P-201ENST00000410691 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-860P-201ENST00000410860 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-1217P-201ENST00000411276 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNU6-785P-201ENST00000411324 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 AC109327.2-201ENST00000448339 378 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 AC009474.2-201ENST00000451383 136 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNA5SP320-201ENST00000516263 124 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 U6.90-201ENST00000614007 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 AL773524.1-201ENST00000614065 229 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 U6.70-201ENST00000620287 104 ntBASIC2.47□□□□□ -2.01
SCG3Q8WXD2 RNY1P10-201ENST00000363268 113 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 Y_RNA.247-201ENST00000364500 92 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 RNU6-439P-201ENST00000384188 106 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 RNU6-813P-201ENST00000384691 107 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 SNORD41-201ENST00000386967 70 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SCG3Q8WXD2 AL359511.1-201ENST00000402970 211 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 AL445685.2-201ENST00000422551 342 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 RNU7-137P-201ENST00000516788 62 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 AL357312.1-201ENST00000603879 298 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 MIR6840-201ENST00000611937 71 ntBASIC2.46□□□□□ -2.02
SCG3Q8WXD2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms