Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 MIR8081-201ENST00000611533 95 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 MIR4251-201ENST00000635819 61 ntBASIC1.89□□□□□ -2.11
SH3RF2Q8TEC5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SH3RF2Q8TEC5 Y_RNA.49-201ENST00000362714 112 ntBASIC1.88□□□□□ -2.11
SH3RF2Q8TEC5 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
SH3RF2Q8TEC5 MIR8055-201ENST00000610739 97 ntBASIC1.88□□□□□ -2.11
SH3RF2Q8TEC5 MIR6841-201ENST00000637129 72 ntBASIC1.88□□□□□ -2.11
SH3RF2Q8TEC5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SH3RF2Q8TEC5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SH3RF2Q8TEC5 SNORD115-2-201ENST00000362842 82 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 SNORD115-20-201ENST00000365099 82 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 RNA5SP190-201ENST00000365222 118 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 SNORD12C-201ENST00000386307 89 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 SNORD41-201ENST00000386967 70 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 RPS23P4-201ENST00000487908 423 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 RNU6-922P-201ENST00000516753 99 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 RNU6-250P-201ENST00000516958 103 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 MIR3198-2-201ENST00000577868 80 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 AP000942.3-201ENST00000603702 160 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 MIR8063-201ENST00000621930 81 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 AL391516.1-201ENST00000554380 2449 ntBASIC1.87□□□□□ -2.11
SH3RF2Q8TEC5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SH3RF2Q8TEC5 Y_RNA.85-201ENST00000363014 111 ntBASIC1.86□□□□□ -2.11
SH3RF2Q8TEC5 MIR548D2-201ENST00000384955 97 ntBASIC1.86□□□□□ -2.11
SH3RF2Q8TEC5 AL512326.2-201ENST00000426359 151 ntBASIC1.86□□□□□ -2.11
SH3RF2Q8TEC5 RPL39P39-201ENST00000455840 151 ntBASIC1.86□□□□□ -2.11
SH3RF2Q8TEC5 AC113410.1-201ENST00000505029 247 ntBASIC1.86□□□□□ -2.11
SH3RF2Q8TEC5 CYP3A52P-201ENST00000563326 91 ntBASIC1.86□□□□□ -2.11
SH3RF2Q8TEC5 Z97988.1-201ENST00000637697 135 ntBASIC1.86□□□□□ -2.11
SH3RF2Q8TEC5 SNORA63.4-201ENST00000362763 126 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 RNU6-153P-201ENST00000364422 104 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 RNU6-1104P-201ENST00000384723 104 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 HSPE1P24-201ENST00000450782 238 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 RPL39P34-201ENST00000477141 156 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 AC022523.2-201ENST00000561045 150 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.85□□□□□ -2.11
SH3RF2Q8TEC5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 RNU6-1107P-201ENST00000364817 104 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 Y_RNA.362-201ENST00000365518 110 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 SNORA17.3-201ENST00000391159 129 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 RNU4-69P-201ENST00000410677 143 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 HMGN2P19-201ENST00000425149 265 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 AC079140.2-201ENST00000506193 142 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 RNU7-41P-201ENST00000515917 61 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 RNA5SP33-201ENST00000516687 98 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 RNU7-6P-201ENST00000516845 62 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 MIR4448-201ENST00000584360 86 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 AL096840.1-201ENST00000603287 93 ntBASIC1.84□□□□□ -2.11
SH3RF2Q8TEC5 Y_RNA.171-201ENST00000363760 102 ntBASIC1.83□□□□□ -2.12
SH3RF2Q8TEC5 SNORD77B-201ENST00000391112 67 ntBASIC1.83□□□□□ -2.12
SH3RF2Q8TEC5 RNU6-1190P-201ENST00000410811 104 ntBASIC1.83□□□□□ -2.12
SH3RF2Q8TEC5 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
SH3RF2Q8TEC5 AC108667.1-201ENST00000428618 249 ntBASIC1.83□□□□□ -2.12
SH3RF2Q8TEC5 MIR514B-201ENST00000516774 80 ntBASIC1.83□□□□□ -2.12
SH3RF2Q8TEC5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.83□□□□□ -2.12
SH3RF2Q8TEC5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SH3RF2Q8TEC5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SH3RF2Q8TEC5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 AL359851.1-201ENST00000569460 4997 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 SNORA63.5-201ENST00000363548 123 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 SNORD1A-201ENST00000364968 72 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 Y_RNA.309-201ENST00000365046 111 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 SNORD38B-201ENST00000384690 67 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 MT-TI-201ENST00000387365 69 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 HMGN1P33-201ENST00000432945 451 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 RPL30P7-201ENST00000479312 323 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 Y_RNA.676-201ENST00000516393 96 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 MIR548AO-201ENST00000579992 96 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 SNORD38B-202ENST00000625943 69 ntBASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SH3RF2Q8TEC5 MIR302D-201ENST00000362275 68 ntBASIC1.81□□□□□ -2.12
SH3RF2Q8TEC5 SNORD48-201ENST00000364953 64 ntBASIC1.81□□□□□ -2.12
SH3RF2Q8TEC5 Y_RNA.549-201ENST00000384657 102 ntBASIC1.81□□□□□ -2.12
SH3RF2Q8TEC5 RNU6-1258P-201ENST00000516911 111 ntBASIC1.81□□□□□ -2.12
SH3RF2Q8TEC5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.81□□□□□ -2.12
SH3RF2Q8TEC5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.81□□□□□ -2.12
SH3RF2Q8TEC5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SH3RF2Q8TEC5 Y_RNA.116-201ENST00000363292 103 ntBASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 MIR1302-5-201ENST00000408164 150 ntBASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 MIR1912-201ENST00000410389 80 ntBASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 AL031737.1-201ENST00000450125 223 ntBASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 AC009474.2-201ENST00000451383 136 ntBASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 AC005908.1-201ENST00000468701 347 ntBASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 MIR502-201ENST00000606349 86 ntBASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 AL035470.1-201ENST00000622571 220 ntBASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.8□□□□□ -2.12
SH3RF2Q8TEC5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms