Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
NUP43Q8NFH3 RNU6-1201P-201ENST00000384227 107 ntBASIC2.09□□□□□ -2.07
NUP43Q8NFH3 RNU6-795P-201ENST00000516323 103 ntBASIC2.09□□□□□ -2.07
NUP43Q8NFH3 RNU2-19P-201ENST00000517288 84 ntBASIC2.09□□□□□ -2.07
NUP43Q8NFH3 MIR5694-201ENST00000581190 76 ntBASIC2.09□□□□□ -2.07
NUP43Q8NFH3 MIR8065-201ENST00000620577 100 ntBASIC2.09□□□□□ -2.07
NUP43Q8NFH3 Z97988.1-201ENST00000637697 135 ntBASIC2.09□□□□□ -2.07
NUP43Q8NFH3 AC005336.3-201ENST00000623833 2679 ntBASIC2.09□□□□□ -2.08
NUP43Q8NFH3 SNORA1.1-201ENST00000364671 133 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 Y_RNA.290-201ENST00000364879 114 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 RNU6-342P-201ENST00000384521 104 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 RNU4-53P-201ENST00000410828 140 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 Z98742.3-201ENST00000418637 326 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 AC004941.2-201ENST00000427009 228 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 RNU7-61P-201ENST00000515897 61 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 RNU6-1018P-201ENST00000516577 106 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 RNU6-521P-201ENST00000516663 105 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 MIR548Z-201ENST00000584743 97 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 AC062037.1-201ENST00000605302 128 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 AC091304.10-201ENST00000641554 121 ntBASIC2.08□□□□□ -2.08
NUP43Q8NFH3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.08□□□□□ -2.08
NUP43Q8NFH3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
NUP43Q8NFH3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NUP43Q8NFH3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NUP43Q8NFH3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NUP43Q8NFH3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.07□□□□□ -2.08
NUP43Q8NFH3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NUP43Q8NFH3 AL161935.2-201ENST00000414627 60 ntBASIC2.07□□□□□ -2.08
NUP43Q8NFH3 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
NUP43Q8NFH3 AL603825.1-201ENST00000438481 80 ntBASIC2.07□□□□□ -2.08
NUP43Q8NFH3 AC055731.1-201ENST00000474387 401 ntBASIC2.07□□□□□ -2.08
NUP43Q8NFH3 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
NUP43Q8NFH3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NUP43Q8NFH3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.06□□□□□ -2.08
NUP43Q8NFH3 RNU6-1313P-201ENST00000362622 102 ntBASIC2.06□□□□□ -2.08
NUP43Q8NFH3 MIR653-201ENST00000385279 96 ntBASIC2.06□□□□□ -2.08
NUP43Q8NFH3 RNU6-644P-201ENST00000391155 98 ntBASIC2.06□□□□□ -2.08
NUP43Q8NFH3 AL023284.1-201ENST00000403956 276 ntBASIC2.06□□□□□ -2.08
NUP43Q8NFH3 AC004965.1-201ENST00000413033 213 ntBASIC2.06□□□□□ -2.08
NUP43Q8NFH3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.06□□□□□ -2.08
NUP43Q8NFH3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NUP43Q8NFH3 MIR144-201ENST00000384886 86 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 MIR520C-201ENST00000385005 87 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 RNU6-602P-201ENST00000411155 105 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 AL591806.2-201ENST00000433122 173 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 RNU6-548P-201ENST00000517083 115 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 RNU7-35P-201ENST00000517174 62 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 AC026421.1-201ENST00000519101 163 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 MIR548AO-201ENST00000579992 96 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 MIR4777-201ENST00000583710 86 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.05□□□□□ -2.08
NUP43Q8NFH3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
NUP43Q8NFH3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
NUP43Q8NFH3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NUP43Q8NFH3 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
NUP43Q8NFH3 RNU6-1307P-201ENST00000391012 103 ntBASIC2.04□□□□□ -2.08
NUP43Q8NFH3 AC245047.7-201ENST00000440265 293 ntBASIC2.04□□□□□ -2.08
NUP43Q8NFH3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.04□□□□□ -2.08
NUP43Q8NFH3 SNORA31.11-201ENST00000516528 139 ntBASIC2.04□□□□□ -2.08
NUP43Q8NFH3 AC121758.2-201ENST00000553271 193 ntBASIC2.04□□□□□ -2.08
NUP43Q8NFH3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.04□□□□□ -2.08
NUP43Q8NFH3 U7.3-201ENST00000616123 62 ntBASIC2.04□□□□□ -2.08
NUP43Q8NFH3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NUP43Q8NFH3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
NUP43Q8NFH3 RNU6-60P-201ENST00000364792 103 ntBASIC2.03□□□□□ -2.08
NUP43Q8NFH3 SNORD115-35-201ENST00000365122 82 ntBASIC2.03□□□□□ -2.08
NUP43Q8NFH3 SNORA18-201ENST00000384416 132 ntBASIC2.03□□□□□ -2.08
NUP43Q8NFH3 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
NUP43Q8NFH3 AC090844.1-201ENST00000422019 156 ntBASIC2.03□□□□□ -2.08
NUP43Q8NFH3 RNU7-41P-201ENST00000515917 61 ntBASIC2.03□□□□□ -2.08
NUP43Q8NFH3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
NUP43Q8NFH3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.02□□□□□ -2.09
NUP43Q8NFH3 Y_RNA.95-201ENST00000363079 95 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 SNORD45B-201ENST00000364617 72 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 MIR206-201ENST00000384872 86 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 RN7SKP223-201ENST00000410582 62 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 RNA5SP247-201ENST00000411181 105 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 AC108729.3-201ENST00000513484 108 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 RNU7-2P-201ENST00000516096 62 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 RN7SKP12-201ENST00000516275 143 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.02□□□□□ -2.09
NUP43Q8NFH3 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 MIR4251-201ENST00000635819 61 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 AL512310.12-203ENST00000640543 90 ntBASIC2.02□□□□□ -2.09
NUP43Q8NFH3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NUP43Q8NFH3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NUP43Q8NFH3 RNU6-1134P-201ENST00000365156 101 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 Y_RNA.354-201ENST00000365448 111 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 RNU6-439P-201ENST00000384188 106 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 MIR450A2-201ENST00000385022 100 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 UBL5P1-201ENST00000507979 193 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 Y_RNA.659-201ENST00000515994 113 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 RNU6-162P-201ENST00000516228 103 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 RNU6-1006P-201ENST00000516998 103 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 CYP3A52P-201ENST00000563326 91 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 MIR1273D-201ENST00000577266 86 ntBASIC2.01□□□□□ -2.09
NUP43Q8NFH3 AC024614.2-201ENST00000577584 372 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms