Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 MIR3163-201ENST00000581592 73 ntBASIC2.37□□□□□ -2.03
RETREG2Q8NC44 RNU6-94P-201ENST00000607728 107 ntBASIC2.37□□□□□ -2.03
RETREG2Q8NC44 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
RETREG2Q8NC44 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.37□□□□□ -2.03
RETREG2Q8NC44 SNORA1.1-201ENST00000364671 133 ntBASIC2.36□□□□□ -2.03
RETREG2Q8NC44 Y_RNA.323-201ENST00000365157 109 ntBASIC2.36□□□□□ -2.03
RETREG2Q8NC44 Y_RNA.362-201ENST00000365518 110 ntBASIC2.36□□□□□ -2.03
RETREG2Q8NC44 AC019129.1-201ENST00000403786 261 ntBASIC2.36□□□□□ -2.03
RETREG2Q8NC44 AC025033.1-201ENST00000463883 194 ntBASIC2.36□□□□□ -2.03
RETREG2Q8NC44 RNU6-168P-201ENST00000516189 101 ntBASIC2.36□□□□□ -2.03
RETREG2Q8NC44 AL512310.8-201ENST00000550183 120 ntBASIC2.36□□□□□ -2.03
RETREG2Q8NC44 AL096861.1-201ENST00000610899 123 ntBASIC2.36□□□□□ -2.03
RETREG2Q8NC44 uc_338.28-201ENST00000612082 187 ntBASIC2.36□□□□□ -2.03
RETREG2Q8NC44 Y_RNA.354-201ENST00000365448 111 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 Y_RNA.430-201ENST00000384081 110 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 Y_RNA.549-201ENST00000384657 102 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 U8.13-201ENST00000390842 128 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 RNA5SP144-201ENST00000410846 116 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 AL022718.1-201ENST00000412004 84 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 RNU6-947P-201ENST00000516264 106 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 RNU2-35P-201ENST00000516446 142 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 RNU6-902P-201ENST00000517212 91 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 CYP3A52P-201ENST00000563326 91 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 AL035470.1-201ENST00000622571 220 ntBASIC2.35□□□□□ -2.03
RETREG2Q8NC44 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
RETREG2Q8NC44 RNU6-1298P-201ENST00000362456 101 ntBASIC2.34□□□□□ -2.03
RETREG2Q8NC44 Y_RNA.140-201ENST00000363474 103 ntBASIC2.34□□□□□ -2.03
RETREG2Q8NC44 RNU4-16P-201ENST00000364737 141 ntBASIC2.34□□□□□ -2.03
RETREG2Q8NC44 RNU6-554P-201ENST00000410466 106 ntBASIC2.34□□□□□ -2.03
RETREG2Q8NC44 RPL39P34-201ENST00000477141 156 ntBASIC2.34□□□□□ -2.03
RETREG2Q8NC44 RNU1-40P-201ENST00000516816 164 ntBASIC2.34□□□□□ -2.03
RETREG2Q8NC44 RNU1-97P-201ENST00000516872 164 ntBASIC2.34□□□□□ -2.03
RETREG2Q8NC44 AC024614.2-201ENST00000577584 372 ntBASIC2.34□□□□□ -2.03
RETREG2Q8NC44 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.34□□□□□ -2.03
RETREG2Q8NC44 Y_RNA.163-201ENST00000363702 113 ntBASIC2.33□□□□□ -2.04
RETREG2Q8NC44 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
RETREG2Q8NC44 MIR548D2-201ENST00000384955 97 ntBASIC2.33□□□□□ -2.04
RETREG2Q8NC44 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
RETREG2Q8NC44 RNU6-913P-201ENST00000390913 95 ntBASIC2.33□□□□□ -2.04
RETREG2Q8NC44 MIR1302-5-201ENST00000408164 150 ntBASIC2.33□□□□□ -2.04
RETREG2Q8NC44 RNA5SP89-201ENST00000410300 108 ntBASIC2.33□□□□□ -2.04
RETREG2Q8NC44 RPS3AP1-201ENST00000413190 320 ntBASIC2.33□□□□□ -2.04
RETREG2Q8NC44 SNORA31.4-201ENST00000516049 129 ntBASIC2.33□□□□□ -2.04
RETREG2Q8NC44 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.33□□□□□ -2.04
RETREG2Q8NC44 AP000553.5-201ENST00000641933 54 ntBASIC2.33□□□□□ -2.04
RETREG2Q8NC44 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RETREG2Q8NC44 MIR450A1-201ENST00000362262 91 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 Y_RNA.43-201ENST00000362670 111 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 SNORA63.5-201ENST00000363548 123 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 Y_RNA.338-201ENST00000365320 114 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 RNU6-1014P-201ENST00000383940 103 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 Y_RNA.495-201ENST00000384435 112 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 MT-TI-201ENST00000387365 69 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 RNU6-717P-201ENST00000459076 104 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 AL133373.1-201ENST00000497098 94 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 RNA5SP170-201ENST00000517150 101 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 MIR3192-201ENST00000584920 77 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 HSPE1P19-201ENST00000603327 295 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 MIR6717-201ENST00000622747 73 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 Z97988.1-201ENST00000637697 135 ntBASIC2.32□□□□□ -2.04
RETREG2Q8NC44 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.31□□□□□ -2.04
RETREG2Q8NC44 RNU6-766P-201ENST00000362478 107 ntBASIC2.31□□□□□ -2.04
RETREG2Q8NC44 RNU6-1104P-201ENST00000384723 104 ntBASIC2.31□□□□□ -2.04
RETREG2Q8NC44 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RETREG2Q8NC44 RPS27P16-201ENST00000425758 201 ntBASIC2.31□□□□□ -2.04
RETREG2Q8NC44 AC009474.2-201ENST00000451383 136 ntBASIC2.31□□□□□ -2.04
RETREG2Q8NC44 Y_RNA.694-201ENST00000516677 117 ntBASIC2.31□□□□□ -2.04
RETREG2Q8NC44 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.31□□□□□ -2.04
RETREG2Q8NC44 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
RETREG2Q8NC44 SNORA22.1-201ENST00000362701 134 ntBASIC2.3□□□□□ -2.04
RETREG2Q8NC44 Y_RNA.299-201ENST00000364973 94 ntBASIC2.3□□□□□ -2.04
RETREG2Q8NC44 RNU6-1113P-201ENST00000384348 107 ntBASIC2.3□□□□□ -2.04
RETREG2Q8NC44 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.3□□□□□ -2.04
RETREG2Q8NC44 POLR2J4-204ENST00000418424 324 ntBASIC2.3□□□□□ -2.04
RETREG2Q8NC44 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.3□□□□□ -2.04
RETREG2Q8NC44 RN7SKP88-201ENST00000516847 250 ntBASIC2.3□□□□□ -2.04
RETREG2Q8NC44 RNU11-2P-201ENST00000516898 142 ntBASIC2.3□□□□□ -2.04
RETREG2Q8NC44 MIR8055-201ENST00000610739 97 ntBASIC2.3□□□□□ -2.04
RETREG2Q8NC44 7SK.8-201ENST00000612110 250 ntBASIC2.3□□□□□ -2.04
RETREG2Q8NC44 7SK.11-201ENST00000615477 250 ntBASIC2.3□□□□□ -2.04
RETREG2Q8NC44 7SK.13-201ENST00000622040 250 ntBASIC2.3□□□□□ -2.04
RETREG2Q8NC44 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RETREG2Q8NC44 Y_RNA.328-201ENST00000365208 113 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 RNU4-52P-201ENST00000384209 138 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 Y_RNA.531-201ENST00000384589 121 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 SNORA26.6-201ENST00000391256 115 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 HMGN2P38-201ENST00000423806 265 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 AC245047.7-201ENST00000440265 293 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 AC004812.1-201ENST00000540773 146 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 AC022523.2-201ENST00000561045 150 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 MIR5009-201ENST00000578736 100 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 MIR548AO-201ENST00000579992 96 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 ZNF355P-201ENST00000427301 3216 ntBASIC2.29□□□□□ -2.04
RETREG2Q8NC44 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RETREG2Q8NC44 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.04
RETREG2Q8NC44 RNU1-17P-201ENST00000363022 152 ntBASIC2.28□□□□□ -2.04
RETREG2Q8NC44 U8.6-201ENST00000364939 135 ntBASIC2.28□□□□□ -2.04
RETREG2Q8NC44 Y_RNA.344-201ENST00000365381 112 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms