Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 RNU6-652P-201ENST00000365488 107 ntBASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 U8.15-201ENST00000390947 134 ntBASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 SNORD23.1-201ENST00000408212 104 ntBASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 MIR5094-201ENST00000578766 85 ntBASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 AC103810.7-201ENST00000607821 91 ntBASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 MIR6845-201ENST00000613182 61 ntBASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TTC9BQ8N6N2 Y_RNA.377-201ENST00000365644 108 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 HMGN1P33-201ENST00000432945 451 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 AC003989.2-201ENST00000440224 169 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 RNU7-171P-201ENST00000459581 62 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 AC108210.2-201ENST00000503681 201 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 AC108729.3-201ENST00000513484 108 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 RNU7-12P-201ENST00000516030 62 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 RNA5SP168-201ENST00000516642 112 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 RNU7-193P-201ENST00000516723 65 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 MIR4666B-201ENST00000578142 81 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 MIR5694-201ENST00000581190 76 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 RNU6-86P-201ENST00000606534 107 ntBASIC2.11□□□□□ -2.07
TTC9BQ8N6N2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 Y_RNA.96-201ENST00000363092 109 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 Y_RNA.370-201ENST00000365589 108 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 RNU6-1296P-201ENST00000383879 107 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 SNORA6-201ENST00000384033 151 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 RNU6-1319P-201ENST00000390855 104 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 RNU6-747P-201ENST00000390928 104 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 SNORD28B-201ENST00000390993 75 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 RNU6-1307P-201ENST00000391012 103 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 RNU6-241P-201ENST00000391148 104 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 RNU6-177P-201ENST00000411257 104 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 AC090844.1-201ENST00000422019 156 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 HMGN2P23-201ENST00000456759 269 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 AC121758.2-201ENST00000553271 193 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 DEFB122-202ENST00000569013 197 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 AC096720.1-201ENST00000604441 183 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 SNORA28-201ENST00000606769 126 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 SEPT14P17-201ENST00000617978 177 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 MIR6841-201ENST00000637129 72 ntBASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TTC9BQ8N6N2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 RNU6-1313P-201ENST00000362622 102 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 Y_RNA.426-201ENST00000384068 113 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 MIR597-201ENST00000384968 97 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 RNU6-913P-201ENST00000390913 95 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 SNORA26.6-201ENST00000391256 115 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 BX510359.4-201ENST00000423750 193 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 UBL5P1-201ENST00000507979 193 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 RNU6-295P-201ENST00000516901 104 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 MIR3152-201ENST00000579801 74 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 AC069114.2-201ENST00000604699 304 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 AC027279.3-201ENST00000625055 122 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 MIR548BB-201ENST00000626714 66 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 AC006160.2-201ENST00000637708 154 ntBASIC2.09□□□□□ -2.07
TTC9BQ8N6N2 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
TTC9BQ8N6N2 SNORD58A-201ENST00000383875 65 ntBASIC2.08□□□□□ -2.08
TTC9BQ8N6N2 RNU6-342P-201ENST00000384521 104 ntBASIC2.08□□□□□ -2.08
TTC9BQ8N6N2 Y_RNA.609-201ENST00000410669 89 ntBASIC2.08□□□□□ -2.08
TTC9BQ8N6N2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.08□□□□□ -2.08
TTC9BQ8N6N2 RNU6-1018P-201ENST00000516577 106 ntBASIC2.08□□□□□ -2.08
TTC9BQ8N6N2 MIR6717-201ENST00000622747 73 ntBASIC2.08□□□□□ -2.08
TTC9BQ8N6N2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
TTC9BQ8N6N2 SNORD115-2-201ENST00000362842 82 ntBASIC2.07□□□□□ -2.08
TTC9BQ8N6N2 SNORD116-10-201ENST00000363791 102 ntBASIC2.07□□□□□ -2.08
TTC9BQ8N6N2 SNORD115-20-201ENST00000365099 82 ntBASIC2.07□□□□□ -2.08
TTC9BQ8N6N2 RPS29P29-201ENST00000456396 171 ntBASIC2.07□□□□□ -2.08
TTC9BQ8N6N2 RNU7-53P-201ENST00000516705 60 ntBASIC2.07□□□□□ -2.08
TTC9BQ8N6N2 AC026271.5-201ENST00000577873 130 ntBASIC2.07□□□□□ -2.08
TTC9BQ8N6N2 MIR4529-201ENST00000578110 78 ntBASIC2.07□□□□□ -2.08
TTC9BQ8N6N2 AC080100.1-201ENST00000624239 5356 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 RNU6-833P-201ENST00000363486 107 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 SNORA1.2-201ENST00000365189 134 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 SNORA70.7-201ENST00000384159 133 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 RNU6-24P-201ENST00000384440 107 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 MIR206-201ENST00000384872 86 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 SNORA40.18-201ENST00000391200 128 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 AL034345.1-201ENST00000407768 123 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 AL603825.1-201ENST00000438481 80 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 Y_RNA.676-201ENST00000516393 96 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 MIR548AR-201ENST00000582191 57 ntBASIC2.06□□□□□ -2.08
TTC9BQ8N6N2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 RNU6-509P-201ENST00000363519 107 ntBASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 RNU6-1019P-201ENST00000364424 107 ntBASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 RNU6-1163P-201ENST00000364516 107 ntBASIC2.05□□□□□ -2.08
TTC9BQ8N6N2 MIR34C-201ENST00000384831 77 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms