Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 SNORA4-201ENST00000584302 138 ntBASIC3.08□□□□□ -1.92
LAPTM4BQ86VI4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.08□□□□□ -1.92
LAPTM4BQ86VI4 MIR8057-201ENST00000620957 69 ntBASIC3.08□□□□□ -1.92
LAPTM4BQ86VI4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LAPTM4BQ86VI4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LAPTM4BQ86VI4 RNU6-112P-201ENST00000363599 104 ntBASIC3.07□□□□□ -1.92
LAPTM4BQ86VI4 MIR483-201ENST00000385070 76 ntBASIC3.07□□□□□ -1.92
LAPTM4BQ86VI4 SNORA48.2-201ENST00000390926 124 ntBASIC3.07□□□□□ -1.92
LAPTM4BQ86VI4 uc_338.1-201ENST00000612113 180 ntBASIC3.07□□□□□ -1.92
LAPTM4BQ86VI4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LAPTM4BQ86VI4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LAPTM4BQ86VI4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LAPTM4BQ86VI4 RNA5SP374-201ENST00000362939 125 ntBASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 SNORA25.4-201ENST00000363666 124 ntBASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 Y_RNA.207-201ENST00000364142 106 ntBASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 RNU6-1051P-201ENST00000365471 102 ntBASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 SNORD45A-201ENST00000384512 84 ntBASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 RNU6-291P-201ENST00000384720 107 ntBASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 AC104389.3-201ENST00000445629 235 ntBASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 UBL5P2-201ENST00000583788 219 ntBASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 AL449363.1-201ENST00000617815 186 ntBASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
LAPTM4BQ86VI4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LAPTM4BQ86VI4 RNU4-82P-201ENST00000362443 140 ntBASIC3.05□□□□□ -1.92
LAPTM4BQ86VI4 RNU6-340P-201ENST00000364005 107 ntBASIC3.05□□□□□ -1.92
LAPTM4BQ86VI4 Y_RNA.443-201ENST00000384135 111 ntBASIC3.05□□□□□ -1.92
LAPTM4BQ86VI4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LAPTM4BQ86VI4 MIR1283-2-201ENST00000408621 87 ntBASIC3.05□□□□□ -1.92
LAPTM4BQ86VI4 MIR1289-1-201ENST00000408836 144 ntBASIC3.05□□□□□ -1.92
LAPTM4BQ86VI4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.05□□□□□ -1.92
LAPTM4BQ86VI4 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
LAPTM4BQ86VI4 U4.3-201ENST00000621047 82 ntBASIC3.05□□□□□ -1.92
LAPTM4BQ86VI4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 Y_RNA.42-201ENST00000362660 108 ntBASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 RNU6-205P-201ENST00000390858 107 ntBASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 RNU4-47P-201ENST00000410876 114 ntBASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 SNORD63B-201ENST00000411005 70 ntBASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 RNA5SP217-201ENST00000515959 91 ntBASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 AC121758.2-201ENST00000553271 193 ntBASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 MIR5004-201ENST00000579078 107 ntBASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 MIR2682-201ENST00000580305 110 ntBASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 AC092435.3-201ENST00000565538 3654 ntBASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LAPTM4BQ86VI4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LAPTM4BQ86VI4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
LAPTM4BQ86VI4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LAPTM4BQ86VI4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LAPTM4BQ86VI4 MIR128-1-201ENST00000384921 82 ntBASIC3.03□□□□□ -1.92
LAPTM4BQ86VI4 SNORA48.1-201ENST00000390879 135 ntBASIC3.03□□□□□ -1.92
LAPTM4BQ86VI4 AC105272.1-201ENST00000438604 198 ntBASIC3.03□□□□□ -1.92
LAPTM4BQ86VI4 MIR3675-201ENST00000583661 73 ntBASIC3.03□□□□□ -1.92
LAPTM4BQ86VI4 PRELID3BP2-201ENST00000605362 201 ntBASIC3.03□□□□□ -1.92
LAPTM4BQ86VI4 RNU6-614P-201ENST00000384369 107 ntBASIC3.02□□□□□ -1.93
LAPTM4BQ86VI4 RNU6-531P-201ENST00000516694 104 ntBASIC3.02□□□□□ -1.93
LAPTM4BQ86VI4 RNA5SP380-201ENST00000517190 98 ntBASIC3.02□□□□□ -1.93
LAPTM4BQ86VI4 U6.59-201ENST00000615686 107 ntBASIC3.02□□□□□ -1.93
LAPTM4BQ86VI4 MIR6740-201ENST00000618268 113 ntBASIC3.02□□□□□ -1.93
LAPTM4BQ86VI4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.02□□□□□ -1.93
LAPTM4BQ86VI4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 RNU6-525P-201ENST00000363685 104 ntBASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 RNU1-138P-201ENST00000384093 164 ntBASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 RNA5SP229-201ENST00000410809 99 ntBASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 RN7SL863P-201ENST00000462370 296 ntBASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 RNU1-143P-201ENST00000516296 146 ntBASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 RNU6-881P-201ENST00000516813 102 ntBASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 U1.23-201ENST00000610293 146 ntBASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 RNU1-68P-201ENST00000615382 146 ntBASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 U1.39-201ENST00000621562 146 ntBASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LAPTM4BQ86VI4 RNU6-681P-201ENST00000364012 104 ntBASIC3□□□□□ -1.93
LAPTM4BQ86VI4 RNY4P3-201ENST00000365254 95 ntBASIC3□□□□□ -1.93
LAPTM4BQ86VI4 SNORA67.4-201ENST00000384688 142 ntBASIC3□□□□□ -1.93
LAPTM4BQ86VI4 MIR563-201ENST00000385080 79 ntBASIC3□□□□□ -1.93
LAPTM4BQ86VI4 RNU6-322P-201ENST00000516010 103 ntBASIC3□□□□□ -1.93
LAPTM4BQ86VI4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3□□□□□ -1.93
LAPTM4BQ86VI4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3□□□□□ -1.93
LAPTM4BQ86VI4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 MIR30D-201ENST00000362283 70 ntBASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 SNORD45.1-201ENST00000363181 77 ntBASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 Y_RNA.239-201ENST00000364444 113 ntBASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 RNU1-148P-201ENST00000384472 162 ntBASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 RNA5SP465-201ENST00000391195 109 ntBASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 RNA5SP501-201ENST00000410990 112 ntBASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 AC092185.1-201ENST00000491371 97 ntBASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 DEFB122-202ENST00000569013 197 ntBASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.99□□□□□ -1.93
LAPTM4BQ86VI4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LAPTM4BQ86VI4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
LAPTM4BQ86VI4 MIR633-201ENST00000384821 98 ntBASIC2.98□□□□□ -1.93
LAPTM4BQ86VI4 RNU6-1165P-201ENST00000410119 107 ntBASIC2.98□□□□□ -1.93
LAPTM4BQ86VI4 RNU7-26P-201ENST00000458980 63 ntBASIC2.98□□□□□ -1.93
LAPTM4BQ86VI4 RNU6-1194P-201ENST00000516208 104 ntBASIC2.98□□□□□ -1.93
LAPTM4BQ86VI4 SNORA25.16-201ENST00000516741 121 ntBASIC2.98□□□□□ -1.93
LAPTM4BQ86VI4 SCARNA20.6-201ENST00000517251 106 ntBASIC2.98□□□□□ -1.93
LAPTM4BQ86VI4 MIR3140-201ENST00000583685 90 ntBASIC2.98□□□□□ -1.93
LAPTM4BQ86VI4 SNORA50A-202ENST00000629536 136 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 272.6 ms