Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 RNA5SP182-201ENST00000516064 82 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-162P-201ENST00000516228 103 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 MIR6717-201ENST00000622747 73 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 SNORD45B-201ENST00000364617 72 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 SNORA70.7-201ENST00000384159 133 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 MIR452-201ENST00000385020 85 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 MRPL35P3-201ENST00000421557 364 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 RPS29P29-201ENST00000456396 171 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 RNU7-73P-201ENST00000458743 63 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 AC022137.1-201ENST00000483735 151 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 RNA5SP33-201ENST00000516687 98 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 RNU7-53P-201ENST00000516705 60 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 RNA5SP137-201ENST00000516833 135 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 SNRPGP19-201ENST00000603826 189 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 SNORD14A-201ENST00000606526 91 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 AL020996.3-201ENST00000606617 222 ntBASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LIMS2Q7Z4I7 AC245060.5-201ENST00000610778 3293 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-1313P-201ENST00000362622 102 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 Y_RNA.96-201ENST00000363092 109 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 Y_RNA.190-201ENST00000363964 101 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 RNY1P1-201ENST00000364372 112 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 MIR136-201ENST00000385207 82 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-913P-201ENST00000390913 95 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-521P-201ENST00000516663 105 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-958P-201ENST00000516995 106 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 MIR548AR-201ENST00000582191 57 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 IGLL4P-201ENST00000614590 133 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 MIR3202-2-201ENST00000635980 79 ntBASIC2.06□□□□□ -2.08
LIMS2Q7Z4I7 SNORA3A-201ENST00000364113 130 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 SNORD115-35-201ENST00000365122 82 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-787P-201ENST00000384032 107 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-1124P-201ENST00000384169 107 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 MIR597-201ENST00000384968 97 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 MIR516B2-201ENST00000385190 85 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 SNORD77B-201ENST00000391112 67 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 RNA5SP261-201ENST00000410536 106 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-1190P-201ENST00000410811 104 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 RPL39P39-201ENST00000455840 151 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 SUB1P4-201ENST00000566062 339 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 MIR4439-201ENST00000583746 80 ntBASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.05□□□□□ -2.08
LIMS2Q7Z4I7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-979P-201ENST00000383896 107 ntBASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 SNORD28B-201ENST00000390993 75 ntBASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-887P-201ENST00000410660 100 ntBASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 AC093850.1-201ENST00000454121 251 ntBASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 RNU7-67P-201ENST00000459003 62 ntBASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 RNVU1-2-201ENST00000516326 135 ntBASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 Y_RNA.705-201ENST00000516862 110 ntBASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
LIMS2Q7Z4I7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 Y_RNA.73-201ENST00000362910 113 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-219P-201ENST00000364728 107 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-1276P-201ENST00000365372 104 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 Y_RNA.467-201ENST00000384297 102 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-296P-201ENST00000384608 107 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 MIR526A1-201ENST00000384897 85 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 SNORA48.1-201ENST00000390879 135 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 RNU11-3P-201ENST00000391111 133 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-972P-201ENST00000391208 107 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 MIR1255A-201ENST00000408338 113 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 RNU7-34P-201ENST00000459394 64 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 SNORD123-201ENST00000459473 70 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 AC099513.1-201ENST00000490423 301 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 MIR8055-201ENST00000610739 97 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 AC243994.1-201ENST00000618627 109 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 AL513423.1-201ENST00000621695 132 ntBASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.03□□□□□ -2.08
LIMS2Q7Z4I7 RNU6-497P-201ENST00000365316 104 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 SNORD116-22-201ENST00000384430 92 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 Y_RNA.537-201ENST00000384626 109 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 SNORA26.9-201ENST00000391322 122 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 AC019129.1-201ENST00000403786 261 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-402P-201ENST00000410678 103 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 RNA5SP225-201ENST00000410874 135 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-1006P-201ENST00000516998 103 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 RNA5SP437-201ENST00000517249 129 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 MIR3126-201ENST00000577443 74 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 MIR4791-201ENST00000607666 84 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 AC021506.2-201ENST00000612354 169 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 MIR6845-201ENST00000613182 61 ntBASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LIMS2Q7Z4I7 RNU6-112P-201ENST00000363599 104 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 MIR520A-201ENST00000384862 85 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 MIR504-201ENST00000385065 83 ntBASIC2.01□□□□□ -2.09
LIMS2Q7Z4I7 MIR660-201ENST00000385235 97 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms