Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 Y_RNA.467-201ENST00000384297 102 ntBASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 MIR516B2-201ENST00000385190 85 ntBASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 SNORA26.6-201ENST00000391256 115 ntBASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-1190P-201ENST00000410811 104 ntBASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 RNA5SP247-201ENST00000411181 105 ntBASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 RPL39P39-201ENST00000455840 151 ntBASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 MIR5094-201ENST00000578766 85 ntBASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 IGLL4P-201ENST00000614590 133 ntBASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 AC025521.1-201ENST00000621624 286 ntBASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CNKSR3Q6P9H4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-497P-201ENST00000365316 104 ntBASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 Y_RNA.377-201ENST00000365644 108 ntBASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-787P-201ENST00000384032 107 ntBASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-675P-201ENST00000384236 104 ntBASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 SNORA18-201ENST00000384416 132 ntBASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 MRPL35P3-201ENST00000421557 364 ntBASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 RNA5SP182-201ENST00000516064 82 ntBASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-521P-201ENST00000516663 105 ntBASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 AC069114.2-201ENST00000604699 304 ntBASIC2.25□□□□□ -2.05
CNKSR3Q6P9H4 Y_RNA.4-201ENST00000362333 112 ntBASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 SNORA22.1-201ENST00000362701 134 ntBASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 Y_RNA.95-201ENST00000363079 95 ntBASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-402P-201ENST00000410678 103 ntBASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 RNA5SP33-201ENST00000516687 98 ntBASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-267P-201ENST00000516714 103 ntBASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-958P-201ENST00000516995 106 ntBASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CNKSR3Q6P9H4 SNORD45B-201ENST00000364617 72 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 SNORD115-35-201ENST00000365122 82 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-1276P-201ENST00000365372 104 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 Y_RNA.370-201ENST00000365589 108 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 DEFA7P-201ENST00000382676 285 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 AL034345.1-201ENST00000407768 123 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 RNA5SP501-201ENST00000410990 112 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 RNU7-12P-201ENST00000516030 62 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-1018P-201ENST00000516577 106 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 MIR6840-201ENST00000611937 71 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 MIR3202-2-201ENST00000635980 79 ntBASIC2.23□□□□□ -2.05
CNKSR3Q6P9H4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 SNORA16B-201ENST00000364674 135 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-219P-201ENST00000364728 107 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 SNORA24-201ENST00000384096 131 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 SNORA48.1-201ENST00000390879 135 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 RNU6-913P-201ENST00000390913 95 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 SNORD28B-201ENST00000390993 75 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 AC093850.1-201ENST00000454121 251 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 RNU7-34P-201ENST00000459394 64 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 Y_RNA.659-201ENST00000515994 113 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 SNORA31.11-201ENST00000516528 139 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CNKSR3Q6P9H4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.21□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-979P-201ENST00000383896 107 ntBASIC2.21□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.21□□□□□ -2.06
CNKSR3Q6P9H4 RNU7-67P-201ENST00000459003 62 ntBASIC2.21□□□□□ -2.06
CNKSR3Q6P9H4 MIR3152-201ENST00000579801 74 ntBASIC2.21□□□□□ -2.06
CNKSR3Q6P9H4 MIR548AR-201ENST00000582191 57 ntBASIC2.21□□□□□ -2.06
CNKSR3Q6P9H4 MIR4791-201ENST00000607666 84 ntBASIC2.21□□□□□ -2.06
CNKSR3Q6P9H4 MIR6717-201ENST00000622747 73 ntBASIC2.21□□□□□ -2.06
CNKSR3Q6P9H4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 RNA5SP276-201ENST00000362580 94 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-1313P-201ENST00000362622 102 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 Y_RNA.164-201ENST00000363709 102 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 Y_RNA.247-201ENST00000364500 92 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 SNORA1.2-201ENST00000365189 134 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 SNORA32-201ENST00000384072 121 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 SNORD116-22-201ENST00000384430 92 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 SNORD77B-201ENST00000391112 67 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 SNORA40.18-201ENST00000391200 128 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-887P-201ENST00000410660 100 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 RPS29P29-201ENST00000456396 171 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 RNVU1-2-201ENST00000516326 135 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 Y_RNA.705-201ENST00000516862 110 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 MIR4498-201ENST00000577599 66 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 MIR5588-201ENST00000581890 63 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 AL020996.3-201ENST00000606617 222 ntBASIC2.2□□□□□ -2.06
CNKSR3Q6P9H4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 MIR6073-201ENST00000352083 89 ntBASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 Y_RNA.430-201ENST00000384081 110 ntBASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 RNU6-813P-201ENST00000384691 107 ntBASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 MIR526A1-201ENST00000384897 85 ntBASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 MIR452-201ENST00000385020 85 ntBASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 MIR136-201ENST00000385207 82 ntBASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 RNU2-40P-201ENST00000410833 196 ntBASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 UBL5P1-201ENST00000507979 193 ntBASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 AC108729.3-201ENST00000513484 108 ntBASIC2.19□□□□□ -2.06
CNKSR3Q6P9H4 RNU7-53P-201ENST00000516705 60 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 299.6 ms