Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
RNF43Q68DV7 RNU6-1244P-201ENST00000363614 108 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 RNU6-461P-201ENST00000364195 107 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 SNORD56.5-201ENST00000364281 72 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 RNU6-342P-201ENST00000384521 104 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 MIR452-201ENST00000385020 85 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 MIR136-201ENST00000385207 82 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 AL356320.1-201ENST00000429616 163 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 HMGN1P33-201ENST00000432945 451 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 HMGN2P3-201ENST00000433603 273 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 HMGN2P5-201ENST00000436882 273 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 AC093850.1-201ENST00000454121 251 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 RNU7-73P-201ENST00000458743 63 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RNF43Q68DV7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.55□□□□□ -2
RNF43Q68DV7 MIR548AR-201ENST00000582191 57 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 MIR4712-201ENST00000583750 82 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 AC069114.2-201ENST00000604699 304 ntBASIC2.55□□□□□ -2
RNF43Q68DV7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.55□□□□□ -2
RNF43Q68DV7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
RNF43Q68DV7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
RNF43Q68DV7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.54□□□□□ -2
RNF43Q68DV7 RNU6-457P-201ENST00000363999 107 ntBASIC2.54□□□□□ -2
RNF43Q68DV7 Y_RNA.567-201ENST00000384736 106 ntBASIC2.54□□□□□ -2
RNF43Q68DV7 AC092427.1-202ENST00000430569 476 ntBASIC2.54□□□□□ -2
RNF43Q68DV7 RNU1-98P-201ENST00000458992 160 ntBASIC2.54□□□□□ -2
RNF43Q68DV7 AC005786.1-201ENST00000588553 154 ntBASIC2.54□□□□□ -2
RNF43Q68DV7 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
RNF43Q68DV7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
RNF43Q68DV7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
RNF43Q68DV7 Y_RNA.565-201ENST00000384719 101 ntBASIC2.53□□□□□ -2
RNF43Q68DV7 RPL31P63-201ENST00000422565 375 ntBASIC2.53□□□□□ -2
RNF43Q68DV7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.53□□□□□ -2
RNF43Q68DV7 MIR5094-201ENST00000578766 85 ntBASIC2.53□□□□□ -2
RNF43Q68DV7 SNORD3E-202ENST00000627253 216 ntBASIC2.53□□□□□ -2
RNF43Q68DV7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF43Q68DV7 RNU1-138P-201ENST00000384093 164 ntBASIC2.52□□□□□ -2.01
RNF43Q68DV7 MIR548G-201ENST00000408442 89 ntBASIC2.52□□□□□ -2.01
RNF43Q68DV7 RNU6-613P-201ENST00000410412 108 ntBASIC2.52□□□□□ -2.01
RNF43Q68DV7 AL161932.1-201ENST00000437408 146 ntBASIC2.52□□□□□ -2.01
RNF43Q68DV7 AC245047.7-201ENST00000440265 293 ntBASIC2.52□□□□□ -2.01
RNF43Q68DV7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.52□□□□□ -2.01
RNF43Q68DV7 RNA5SP458-201ENST00000516188 119 ntBASIC2.52□□□□□ -2.01
RNF43Q68DV7 AC022202.1-201ENST00000613515 211 ntBASIC2.52□□□□□ -2.01
RNF43Q68DV7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.52□□□□□ -2.01
RNF43Q68DV7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF43Q68DV7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RNF43Q68DV7 AP000648.3-201ENST00000623539 4507 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
RNF43Q68DV7 RNU1-58P-201ENST00000362413 163 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 RNU6-1229P-201ENST00000364295 107 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 Y_RNA.448-201ENST00000384185 108 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RNF43Q68DV7 SNORD123-201ENST00000459473 70 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 AC093729.1-201ENST00000513074 128 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 RNU7-35P-201ENST00000517174 62 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 RNU6-90P-201ENST00000606352 106 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 AL353997.5-201ENST00000618886 171 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
RNF43Q68DV7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.51□□□□□ -2.01
RNF43Q68DV7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RNF43Q68DV7 RNU6-865P-201ENST00000364772 107 ntBASIC2.5□□□□□ -2.01
RNF43Q68DV7 RNU6-1031P-201ENST00000384773 107 ntBASIC2.5□□□□□ -2.01
RNF43Q68DV7 MIR519C-201ENST00000385053 87 ntBASIC2.5□□□□□ -2.01
RNF43Q68DV7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RNF43Q68DV7 SPINT5P-201ENST00000448174 155 ntBASIC2.5□□□□□ -2.01
RNF43Q68DV7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.5□□□□□ -2.01
RNF43Q68DV7 SNORD67.1-201ENST00000516618 108 ntBASIC2.5□□□□□ -2.01
RNF43Q68DV7 MIR1273D-201ENST00000577266 86 ntBASIC2.5□□□□□ -2.01
RNF43Q68DV7 AC020891.4-201ENST00000605745 93 ntBASIC2.5□□□□□ -2.01
RNF43Q68DV7 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
RNF43Q68DV7 U4atac.1-201ENST00000618345 95 ntBASIC2.5□□□□□ -2.01
RNF43Q68DV7 SNORD114-1-201ENST00000362705 72 ntBASIC2.49□□□□□ -2.01
RNF43Q68DV7 RNU1-91P-201ENST00000364746 163 ntBASIC2.49□□□□□ -2.01
RNF43Q68DV7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.49□□□□□ -2.01
RNF43Q68DV7 BX510359.4-201ENST00000423750 193 ntBASIC2.49□□□□□ -2.01
RNF43Q68DV7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.49□□□□□ -2.01
RNF43Q68DV7 AC234781.5-201ENST00000508429 271 ntBASIC2.49□□□□□ -2.01
RNF43Q68DV7 AL513043.2-201ENST00000573941 143 ntBASIC2.49□□□□□ -2.01
RNF43Q68DV7 AC026271.5-201ENST00000577873 130 ntBASIC2.49□□□□□ -2.01
RNF43Q68DV7 AC105081.1-201ENST00000617727 106 ntBASIC2.49□□□□□ -2.01
RNF43Q68DV7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RNF43Q68DV7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.49□□□□□ -2.01
RNF43Q68DV7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF43Q68DV7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RNF43Q68DV7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
RNF43Q68DV7 RNU6-950P-201ENST00000384651 107 ntBASIC2.48□□□□□ -2.01
RNF43Q68DV7 MIR526A1-201ENST00000384897 85 ntBASIC2.48□□□□□ -2.01
RNF43Q68DV7 RNU6-1321P-201ENST00000390905 107 ntBASIC2.48□□□□□ -2.01
RNF43Q68DV7 RNU6-1086P-201ENST00000410930 100 ntBASIC2.48□□□□□ -2.01
RNF43Q68DV7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.48□□□□□ -2.01
RNF43Q68DV7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.48□□□□□ -2.01
RNF43Q68DV7 AC145423.2-201ENST00000610631 239 ntBASIC2.48□□□□□ -2.01
RNF43Q68DV7 MIR8055-201ENST00000610739 97 ntBASIC2.48□□□□□ -2.01
RNF43Q68DV7 AC104389.3-201ENST00000445629 235 ntBASIC2.47□□□□□ -2.01
RNF43Q68DV7 RNU7-79P-201ENST00000516082 62 ntBASIC2.47□□□□□ -2.01
RNF43Q68DV7 AC140658.3-201ENST00000567603 271 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 198.5 ms