Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 SNORD114-30-201ENST00000364448 72 ntBASIC2.48□□□□□ -2.01
TTC39BQ5VTQ0 SNORD115-35-201ENST00000365122 82 ntBASIC2.48□□□□□ -2.01
TTC39BQ5VTQ0 RNU6-573P-201ENST00000383938 106 ntBASIC2.48□□□□□ -2.01
TTC39BQ5VTQ0 MIR520C-201ENST00000385005 87 ntBASIC2.48□□□□□ -2.01
TTC39BQ5VTQ0 AL356379.1-201ENST00000414105 126 ntBASIC2.48□□□□□ -2.01
TTC39BQ5VTQ0 Y_RNA.659-201ENST00000515994 113 ntBASIC2.48□□□□□ -2.01
TTC39BQ5VTQ0 AC067747.1-201ENST00000608026 250 ntBASIC2.48□□□□□ -2.01
TTC39BQ5VTQ0 AL627230.6-201ENST00000611129 280 ntBASIC2.48□□□□□ -2.01
TTC39BQ5VTQ0 MIR494-201ENST00000349529 81 ntBASIC2.47□□□□□ -2.01
TTC39BQ5VTQ0 AL023284.1-201ENST00000403956 276 ntBASIC2.47□□□□□ -2.01
TTC39BQ5VTQ0 Y_RNA.593-201ENST00000410292 98 ntBASIC2.47□□□□□ -2.01
TTC39BQ5VTQ0 RNU6-602P-201ENST00000411155 105 ntBASIC2.47□□□□□ -2.01
TTC39BQ5VTQ0 RNU6-592P-201ENST00000411333 103 ntBASIC2.47□□□□□ -2.01
TTC39BQ5VTQ0 AC004965.1-201ENST00000413033 213 ntBASIC2.47□□□□□ -2.01
TTC39BQ5VTQ0 MIR514B-201ENST00000516774 80 ntBASIC2.47□□□□□ -2.01
TTC39BQ5VTQ0 AC022254.1-201ENST00000567857 235 ntBASIC2.47□□□□□ -2.01
TTC39BQ5VTQ0 AC005336.3-201ENST00000623833 2679 ntBASIC2.47□□□□□ -2.01
TTC39BQ5VTQ0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TTC39BQ5VTQ0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.01
TTC39BQ5VTQ0 MIR21-201ENST00000362134 72 ntBASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 Y_RNA.17-201ENST00000362433 111 ntBASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 Y_RNA.467-201ENST00000384297 102 ntBASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 BTF3P4-201ENST00000418852 495 ntBASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 UBL5P1-201ENST00000507979 193 ntBASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 AC108729.3-201ENST00000513484 108 ntBASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 RNU7-2P-201ENST00000516096 62 ntBASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 SNORA31.11-201ENST00000516528 139 ntBASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 RNU7-35P-201ENST00000517174 62 ntBASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 MIR548AO-201ENST00000579992 96 ntBASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
TTC39BQ5VTQ0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TTC39BQ5VTQ0 Y_RNA.354-201ENST00000365448 111 ntBASIC2.45□□□□□ -2.02
TTC39BQ5VTQ0 RNU6-1307P-201ENST00000391012 103 ntBASIC2.45□□□□□ -2.02
TTC39BQ5VTQ0 MRPL35P3-201ENST00000421557 364 ntBASIC2.45□□□□□ -2.02
TTC39BQ5VTQ0 AC090844.1-201ENST00000422019 156 ntBASIC2.45□□□□□ -2.02
TTC39BQ5VTQ0 DEFB122-202ENST00000569013 197 ntBASIC2.45□□□□□ -2.02
TTC39BQ5VTQ0 AL773524.1-201ENST00000614065 229 ntBASIC2.45□□□□□ -2.02
TTC39BQ5VTQ0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TTC39BQ5VTQ0 Y_RNA.247-201ENST00000364500 92 ntBASIC2.44□□□□□ -2.02
TTC39BQ5VTQ0 RNU6-1152P-201ENST00000384576 107 ntBASIC2.44□□□□□ -2.02
TTC39BQ5VTQ0 MIR206-201ENST00000384872 86 ntBASIC2.44□□□□□ -2.02
TTC39BQ5VTQ0 MIR653-201ENST00000385279 96 ntBASIC2.44□□□□□ -2.02
TTC39BQ5VTQ0 AC026436.1-201ENST00000510537 270 ntBASIC2.44□□□□□ -2.02
TTC39BQ5VTQ0 MIR3945-201ENST00000581853 98 ntBASIC2.44□□□□□ -2.02
TTC39BQ5VTQ0 ZNF658B-202ENST00000615961 3375 ntBASIC2.44□□□□□ -2.02
TTC39BQ5VTQ0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
TTC39BQ5VTQ0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TTC39BQ5VTQ0 RNA5SP276-201ENST00000362580 94 ntBASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 Y_RNA.190-201ENST00000363964 101 ntBASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 AL451046.2-201ENST00000403074 277 ntBASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 AC244636.1-201ENST00000421152 228 ntBASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 MIR5007-201ENST00000583098 95 ntBASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 AC096720.1-201ENST00000604441 183 ntBASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 MIR376B-201ENST00000614515 100 ntBASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 MIR6715A-201ENST00000615929 79 ntBASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 MIR1245B-201ENST00000636115 69 ntBASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
TTC39BQ5VTQ0 RNU4-53P-201ENST00000410828 140 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 AL161935.2-201ENST00000414627 60 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 AC109327.2-201ENST00000448339 378 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 AC008413.1-201ENST00000511864 177 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 RNU7-41P-201ENST00000515917 61 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 RNU7-79P-201ENST00000516082 62 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 Y_RNA.705-201ENST00000516862 110 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 MIR4299-201ENST00000577899 72 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 AC104984.5-201ENST00000586878 94 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 AL096840.1-201ENST00000603287 93 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 MIR4251-201ENST00000635819 61 ntBASIC2.42□□□□□ -2.02
TTC39BQ5VTQ0 AC019129.1-201ENST00000403786 261 ntBASIC2.41□□□□□ -2.02
TTC39BQ5VTQ0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.41□□□□□ -2.02
TTC39BQ5VTQ0 SNORD67.1-201ENST00000516618 108 ntBASIC2.41□□□□□ -2.02
TTC39BQ5VTQ0 RNU6-1006P-201ENST00000516998 103 ntBASIC2.41□□□□□ -2.02
TTC39BQ5VTQ0 CYP3A52P-201ENST00000563326 91 ntBASIC2.41□□□□□ -2.02
TTC39BQ5VTQ0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.41□□□□□ -2.02
TTC39BQ5VTQ0 AC046143.2-201ENST00000609789 160 ntBASIC2.41□□□□□ -2.02
TTC39BQ5VTQ0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TTC39BQ5VTQ0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
TTC39BQ5VTQ0 RNA5SP289-201ENST00000362332 137 ntBASIC2.4□□□□□ -2.03
TTC39BQ5VTQ0 Y_RNA.96-201ENST00000363092 109 ntBASIC2.4□□□□□ -2.03
TTC39BQ5VTQ0 RNU6-887P-201ENST00000410660 100 ntBASIC2.4□□□□□ -2.03
TTC39BQ5VTQ0 RNU2-40P-201ENST00000410833 196 ntBASIC2.4□□□□□ -2.03
TTC39BQ5VTQ0 AL356320.1-201ENST00000429616 163 ntBASIC2.4□□□□□ -2.03
TTC39BQ5VTQ0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
TTC39BQ5VTQ0 AP003327.1-201ENST00000529684 127 ntBASIC2.4□□□□□ -2.03
TTC39BQ5VTQ0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.4□□□□□ -2.03
TTC39BQ5VTQ0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.4□□□□□ -2.03
TTC39BQ5VTQ0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.4□□□□□ -2.03
TTC39BQ5VTQ0 MIR34C-201ENST00000384831 77 ntBASIC2.39□□□□□ -2.03
TTC39BQ5VTQ0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TTC39BQ5VTQ0 RNU6-972P-201ENST00000391208 107 ntBASIC2.39□□□□□ -2.03
TTC39BQ5VTQ0 MIR1261-201ENST00000408659 82 ntBASIC2.39□□□□□ -2.03
TTC39BQ5VTQ0 RPL31P63-201ENST00000422565 375 ntBASIC2.39□□□□□ -2.03
TTC39BQ5VTQ0 RNU6-322P-201ENST00000516010 103 ntBASIC2.39□□□□□ -2.03
TTC39BQ5VTQ0 SNORD53-201ENST00000579969 78 ntBASIC2.39□□□□□ -2.03
TTC39BQ5VTQ0 MIR4439-201ENST00000583746 80 ntBASIC2.39□□□□□ -2.03
TTC39BQ5VTQ0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms