Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SSRP1Q08945 Y_RNA.127-201ENST00000363386 109 ntBASIC1.82□□□□□ -2.12
SSRP1Q08945 RNU6-22P-201ENST00000384355 107 ntBASIC1.82□□□□□ -2.12
SSRP1Q08945 SNORA17.3-201ENST00000391159 129 ntBASIC1.82□□□□□ -2.12
SSRP1Q08945 HMGN1P33-201ENST00000432945 451 ntBASIC1.82□□□□□ -2.12
SSRP1Q08945 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.82□□□□□ -2.12
SSRP1Q08945 RNU6-893P-201ENST00000458841 100 ntBASIC1.82□□□□□ -2.12
SSRP1Q08945 MIR4305-201ENST00000583252 102 ntBASIC1.82□□□□□ -2.12
SSRP1Q08945 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SSRP1Q08945 SNORA25.3-201ENST00000363205 127 ntBASIC1.81□□□□□ -2.12
SSRP1Q08945 RNU6-1053P-201ENST00000515930 101 ntBASIC1.81□□□□□ -2.12
SSRP1Q08945 RNU6-772P-201ENST00000516042 105 ntBASIC1.81□□□□□ -2.12
SSRP1Q08945 CYP3A52P-201ENST00000563326 91 ntBASIC1.81□□□□□ -2.12
SSRP1Q08945 Y_RNA.430-201ENST00000384081 110 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 RNA5SP144-201ENST00000410846 116 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 RPS3AP1-201ENST00000413190 320 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 RNU7-107P-201ENST00000459121 61 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 SNORD13-201ENST00000459299 104 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 RNU6-1333P-201ENST00000516162 93 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 RNU6-659P-201ENST00000516454 104 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 RNU6-1061P-201ENST00000516530 99 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 IGKV1-22-201ENST00000524313 326 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 AP003716.2-201ENST00000528260 108 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 BX248123.2-201ENST00000606318 124 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 AL365222.1-201ENST00000614661 98 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 MIR6841-201ENST00000637129 72 ntBASIC1.8□□□□□ -2.12
SSRP1Q08945 RNU6-1054P-201ENST00000411293 104 ntBASIC1.79□□□□□ -2.12
SSRP1Q08945 AL022718.1-201ENST00000412004 84 ntBASIC1.79□□□□□ -2.12
SSRP1Q08945 RNU7-164P-201ENST00000459221 62 ntBASIC1.79□□□□□ -2.12
SSRP1Q08945 RNU6-479P-201ENST00000516348 105 ntBASIC1.79□□□□□ -2.12
SSRP1Q08945 MIR103A2-201ENST00000362154 78 ntBASIC1.78□□□□□ -2.12
SSRP1Q08945 SNORA22.1-201ENST00000362701 134 ntBASIC1.78□□□□□ -2.12
SSRP1Q08945 RNA5SP264-201ENST00000363115 107 ntBASIC1.78□□□□□ -2.12
SSRP1Q08945 SNORD58C-201ENST00000365223 64 ntBASIC1.78□□□□□ -2.12
SSRP1Q08945 MIR1302-7-201ENST00000408841 72 ntBASIC1.78□□□□□ -2.12
SSRP1Q08945 POLR2J4-204ENST00000418424 324 ntBASIC1.78□□□□□ -2.12
SSRP1Q08945 AC245047.7-201ENST00000440265 293 ntBASIC1.78□□□□□ -2.12
SSRP1Q08945 RNU6-781P-201ENST00000516377 101 ntBASIC1.78□□□□□ -2.12
SSRP1Q08945 Y_RNA.712-201ENST00000517011 92 ntBASIC1.78□□□□□ -2.12
SSRP1Q08945 Y_RNA.298-201ENST00000364960 107 ntBASIC1.77□□□□□ -2.13
SSRP1Q08945 Y_RNA.354-201ENST00000365448 111 ntBASIC1.77□□□□□ -2.13
SSRP1Q08945 RNU6-1168P-201ENST00000390831 104 ntBASIC1.77□□□□□ -2.13
SSRP1Q08945 MIR1304-201ENST00000408243 91 ntBASIC1.77□□□□□ -2.13
SSRP1Q08945 RNA5SP136-201ENST00000410906 107 ntBASIC1.77□□□□□ -2.13
SSRP1Q08945 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.77□□□□□ -2.13
SSRP1Q08945 AC023790.1-201ENST00000482174 347 ntBASIC1.77□□□□□ -2.13
SSRP1Q08945 RNU11-2P-201ENST00000516898 142 ntBASIC1.77□□□□□ -2.13
SSRP1Q08945 SNORD53B-201ENST00000577887 78 ntBASIC1.77□□□□□ -2.13
SSRP1Q08945 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.77□□□□□ -2.13
SSRP1Q08945 MIR378A-201ENST00000362177 66 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 SNORD38B-201ENST00000384690 67 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 MIR517C-201ENST00000385103 95 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 RNU6-1154P-201ENST00000391001 104 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 MIR1323-201ENST00000408090 73 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 MIR1263-201ENST00000408324 86 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 RNU2-51P-201ENST00000410708 197 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 AC090844.1-201ENST00000422019 156 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 AC048334.1-201ENST00000477975 159 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 RNU6-313P-201ENST00000516317 112 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 RNU2-35P-201ENST00000516446 142 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 RNY4P20-201ENST00000516678 93 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.76□□□□□ -2.13
SSRP1Q08945 PRELID3BP2-201ENST00000605362 201 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 snoU13.31-201ENST00000607291 104 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 SNORD38B-202ENST00000625943 69 ntBASIC1.76□□□□□ -2.13
SSRP1Q08945 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SSRP1Q08945 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SSRP1Q08945 Y_RNA.261-201ENST00000364631 102 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 RNU6-396P-201ENST00000365369 105 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 Y_RNA.525-201ENST00000384570 113 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 MIRLET7F2-201ENST00000385277 83 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 MIR1185-1-201ENST00000408598 86 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 RNU6-602P-201ENST00000411155 105 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 RNU7-123P-201ENST00000515911 60 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 SNORA31.2-201ENST00000516019 134 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 MIR2115-201ENST00000516657 100 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 MIR4781-201ENST00000585250 76 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 MIR8065-201ENST00000620577 100 ntBASIC1.75□□□□□ -2.13
SSRP1Q08945 RNU6-1081P-201ENST00000384537 107 ntBASIC1.74□□□□□ -2.13
SSRP1Q08945 BTF3P4-201ENST00000418852 495 ntBASIC1.74□□□□□ -2.13
SSRP1Q08945 AC025166.1-201ENST00000612411 163 ntBASIC1.74□□□□□ -2.13
SSRP1Q08945 MIR3914-2-201ENST00000637339 95 ntBASIC1.74□□□□□ -2.13
SSRP1Q08945 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SSRP1Q08945 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SSRP1Q08945 Y_RNA.226-201ENST00000364337 114 ntBASIC1.73□□□□□ -2.13
SSRP1Q08945 RNU6-60P-201ENST00000364792 103 ntBASIC1.73□□□□□ -2.13
SSRP1Q08945 SNORA67.6-201ENST00000391093 99 ntBASIC1.73□□□□□ -2.13
SSRP1Q08945 MIR548I2-201ENST00000408348 149 ntBASIC1.73□□□□□ -2.13
SSRP1Q08945 RNU7-113P-201ENST00000459273 62 ntBASIC1.73□□□□□ -2.13
SSRP1Q08945 Y_RNA.171-201ENST00000363760 102 ntBASIC1.72□□□□□ -2.13
SSRP1Q08945 RNU1-42P-201ENST00000364033 160 ntBASIC1.72□□□□□ -2.13
SSRP1Q08945 Y_RNA.346-201ENST00000365385 112 ntBASIC1.72□□□□□ -2.13
SSRP1Q08945 SNORA22C-201ENST00000384614 134 ntBASIC1.72□□□□□ -2.13
SSRP1Q08945 MIR320A-201ENST00000385302 82 ntBASIC1.72□□□□□ -2.13
SSRP1Q08945 SNORA67.5-201ENST00000391036 107 ntBASIC1.72□□□□□ -2.13
SSRP1Q08945 COX6CP6-201ENST00000490840 228 ntBASIC1.72□□□□□ -2.13
SSRP1Q08945 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.72□□□□□ -2.13
SSRP1Q08945 AC004812.1-201ENST00000540773 146 ntBASIC1.72□□□□□ -2.13
SSRP1Q08945 AL645939.4-201ENST00000604495 135 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms