Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 AC022616.6-201ENST00000520479 119 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 RN7SKP299-201ENST00000606679 301 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 RNU6-74P-201ENST00000384235 107 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 RNU6-601P-201ENST00000384540 107 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 RNU6-466P-201ENST00000391224 103 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.2□□□□□ -2.6
PRKDCP78527 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 MIR4490-201ENST00000582647 84 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 TUSC7.1-201ENST00000610969 165 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 HULC.1-201ENST00000612720 240 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 RNA5SP403-201ENST00000363598 108 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 RNU6-899P-201ENST00000363947 107 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 AC093423.1-201ENST00000440817 142 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 AL033528.1-201ENST00000453780 140 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.2□□□□□ -2.6
PRKDCP78527 MIR5692C1-201ENST00000585309 91 ntBASIC-1.2□□□□□ -2.6
PRKDCP78527 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 BX295541.1-201ENST00000417774 250 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 MIR5583-1-201ENST00000580941 59 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 AC098479.1-201ENST00000609225 154 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 RNU7-35P-201ENST00000517174 62 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.21□□□□□ -2.6
PRKDCP78527 SNORD113-7-201ENST00000363762 77 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 AL606845.1-201ENST00000404881 255 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 MTCO2P30-201ENST00000503662 364 ntBASIC-1.21□□□□□ -2.6
PRKDCP78527 RNU6-913P-201ENST00000390913 95 ntBASIC-1.22□□□□□ -2.6
PRKDCP78527 AC127455.1-201ENST00000565496 145 ntBASIC-1.22□□□□□ -2.6
PRKDCP78527 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.22□□□□□ -2.6
PRKDCP78527 SNORD12B-201ENST00000410433 91 ntBASIC-1.22□□□□□ -2.6
PRKDCP78527 AL353813.1-201ENST00000440700 253 ntBASIC-1.22□□□□□ -2.6
PRKDCP78527 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.22□□□□□ -2.6
PRKDCP78527 SNORA40.9-201ENST00000515895 93 ntBASIC-1.22□□□□□ -2.6
PRKDCP78527 RNU6-208P-201ENST00000362431 107 ntBASIC-1.22□□□□□ -2.61
PRKDCP78527 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.22□□□□□ -2.61
PRKDCP78527 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.22□□□□□ -2.61
PRKDCP78527 RNU6-606P-201ENST00000384721 111 ntBASIC-1.22□□□□□ -2.61
PRKDCP78527 MIR206-201ENST00000384872 86 ntBASIC-1.22□□□□□ -2.61
PRKDCP78527 SNORA53-201ENST00000391141 249 ntBASIC-1.22□□□□□ -2.61
PRKDCP78527 RNU6-189P-201ENST00000516120 101 ntBASIC-1.22□□□□□ -2.61
PRKDCP78527 AL121895.2-201ENST00000619558 447 ntBASIC-1.22□□□□□ -2.61
PRKDCP78527 RNU6-454P-201ENST00000364292 107 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 RNU2-66P-201ENST00000410650 161 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 SNORA18-201ENST00000384416 132 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.23□□□□□ -2.61
PRKDCP78527 RNU6-334P-201ENST00000517072 102 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 AC060788.1-201ENST00000521318 469 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 AL138960.2-201ENST00000625145 535 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 MIR513C-201ENST00000401352 84 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 RNU7-113P-201ENST00000459273 62 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.23□□□□□ -2.61
PRKDCP78527 AC124303.1-201ENST00000605703 360 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 AL133215.3-201ENST00000609801 448 ntBASIC-1.23□□□□□ -2.61
PRKDCP78527 SNORD115-32-201ENST00000364079 82 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 RNU6-318P-201ENST00000384283 103 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 SNORA26.4-201ENST00000391188 123 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 RNU6-757P-201ENST00000410334 100 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 AF228730.4-201ENST00000421457 183 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 EIF1P2-201ENST00000428233 350 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 AL353691.2-201ENST00000443795 59 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 CHEK2P4-201ENST00000450340 246 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 RNU6-54P-201ENST00000365563 107 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 MIR519E-201ENST00000385075 84 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 AL365203.2-201ENST00000423444 196 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 RNU7-87P-201ENST00000459343 62 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 RNU7-115P-201ENST00000516433 55 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 MIR2355-201ENST00000517199 87 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 AC008507.2-201ENST00000588402 1176 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 AC122108.2-201ENST00000611946 526 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 AC073415.1-201ENST00000449240 153 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 RNU6-625P-201ENST00000459412 107 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 MIR548AY-201ENST00000617669 107 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 AC092794.2-201ENST00000620933 563 ntBASIC-1.24□□□□□ -2.61
PRKDCP78527 RNU6-728P-201ENST00000365375 104 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.25□□□□□ -2.61
PRKDCP78527 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 RNU6-597P-201ENST00000365620 102 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 ACA59.1-201ENST00000515966 143 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 RNU6-126P-201ENST00000516685 103 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 RNU7-70P-201ENST00000516941 66 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 MIR4662B-201ENST00000579498 81 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 MIR548AM-201ENST00000584298 74 ntBASIC-1.25□□□□□ -2.61
PRKDCP78527 SNORD115-33-201ENST00000363723 82 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 288.4 ms