Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 Z99129.1-201ENST00000612510 255 ntBASIC-1.15□□□□□ -2.59
AP3S2P59780 AC015540.1-201ENST00000615828 501 ntBASIC-1.15□□□□□ -2.59
AP3S2P59780 U2.1-201ENST00000618978 145 ntBASIC-1.15□□□□□ -2.59
AP3S2P59780 MIR367-201ENST00000362299 68 ntBASIC-1.16□□□□□ -2.6
AP3S2P59780 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.16□□□□□ -2.6
AP3S2P59780 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.16□□□□□ -2.6
AP3S2P59780 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.16□□□□□ -2.6
AP3S2P59780 MIR181B2-201ENST00000385004 89 ntBASIC-1.16□□□□□ -2.6
AP3S2P59780 MIR599-201ENST00000385069 95 ntBASIC-1.16□□□□□ -2.6
AP3S2P59780 RNU6-763P-201ENST00000390865 106 ntBASIC-1.16□□□□□ -2.6
AP3S2P59780 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.16□□□□□ -2.6
AP3S2P59780 SCARNA17-201ENST00000516183 144 ntBASIC-1.16□□□□□ -2.6
AP3S2P59780 RNU7-4P-201ENST00000516961 62 ntBASIC-1.16□□□□□ -2.6
AP3S2P59780 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.16□□□□□ -2.6
AP3S2P59780 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.16□□□□□ -2.6
AP3S2P59780 MIR548H5-201ENST00000580314 60 ntBASIC-1.16□□□□□ -2.6
AP3S2P59780 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.17□□□□□ -2.6
AP3S2P59780 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.17□□□□□ -2.6
AP3S2P59780 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.17□□□□□ -2.6
AP3S2P59780 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.17□□□□□ -2.6
AP3S2P59780 AC096644.2-201ENST00000429278 159 ntBASIC-1.17□□□□□ -2.6
AP3S2P59780 AP003733.2-201ENST00000529409 171 ntBASIC-1.17□□□□□ -2.6
AP3S2P59780 RN7SKP299-201ENST00000606679 301 ntBASIC-1.17□□□□□ -2.6
AP3S2P59780 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.18□□□□□ -2.6
AP3S2P59780 RNU6-21P-201ENST00000384710 107 ntBASIC-1.18□□□□□ -2.6
AP3S2P59780 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.18□□□□□ -2.6
AP3S2P59780 AC107399.1-201ENST00000451226 265 ntBASIC-1.18□□□□□ -2.6
AP3S2P59780 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.18□□□□□ -2.6
AP3S2P59780 RNU6-264P-201ENST00000517134 104 ntBASIC-1.18□□□□□ -2.6
AP3S2P59780 uc_338.10-201ENST00000621872 182 ntBASIC-1.18□□□□□ -2.6
AP3S2P59780 AC021613.1-201ENST00000623880 111 ntBASIC-1.18□□□□□ -2.6
AP3S2P59780 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 MIR9-2-201ENST00000384838 87 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 MTND1P14-201ENST00000427400 950 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 RNU7-80P-201ENST00000459562 61 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 AC021146.6-201ENST00000514659 117 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 RNU6-175P-201ENST00000516896 107 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 AC109635.3-201ENST00000529536 185 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.19□□□□□ -2.6
AP3S2P59780 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 AL669831.3-213ENST00000636676 183 ntBASIC-1.19□□□□□ -2.6
AP3S2P59780 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.2□□□□□ -2.6
AP3S2P59780 RNU1-141P-201ENST00000364623 158 ntBASIC-1.2□□□□□ -2.6
AP3S2P59780 RNY4P3-201ENST00000365254 95 ntBASIC-1.2□□□□□ -2.6
AP3S2P59780 RNU4-70P-201ENST00000384579 139 ntBASIC-1.2□□□□□ -2.6
AP3S2P59780 MTCO2P24-201ENST00000515611 426 ntBASIC-1.2□□□□□ -2.6
AP3S2P59780 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.2□□□□□ -2.6
AP3S2P59780 MIR4724-201ENST00000579485 89 ntBASIC-1.2□□□□□ -2.6
AP3S2P59780 MIR3920-201ENST00000581751 86 ntBASIC-1.2□□□□□ -2.6
AP3S2P59780 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 SNORD114-29-201ENST00000364819 70 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 MIR539-201ENST00000365690 78 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 RNU6-901P-201ENST00000384593 106 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 RPS29P25-201ENST00000481709 171 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 TRAJ51-201ENST00000504127 63 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.21□□□□□ -2.6
AP3S2P59780 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 RNU4-16P-201ENST00000364737 141 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 RNU6-449P-201ENST00000383914 107 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 RNU6-937P-201ENST00000384325 106 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 SNORD56B-201ENST00000384713 71 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 MIR196A1-201ENST00000388006 70 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 RNU6-191P-201ENST00000516295 94 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 RNU6-126P-201ENST00000516685 103 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 YWHAEP2-201ENST00000580066 112 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 AC138305.3-201ENST00000624988 240 ntBASIC-1.22□□□□□ -2.6
AP3S2P59780 SNORD114-15-201ENST00000364687 72 ntBASIC-1.23□□□□□ -2.61
AP3S2P59780 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.23□□□□□ -2.61
AP3S2P59780 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.23□□□□□ -2.61
AP3S2P59780 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.23□□□□□ -2.61
AP3S2P59780 RNU7-13P-201ENST00000516413 62 ntBASIC-1.23□□□□□ -2.61
AP3S2P59780 RNU6-314P-201ENST00000516574 104 ntBASIC-1.23□□□□□ -2.61
AP3S2P59780 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.23□□□□□ -2.61
AP3S2P59780 MIR548AE1-201ENST00000583292 70 ntBASIC-1.23□□□□□ -2.61
AP3S2P59780 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.23□□□□□ -2.61
AP3S2P59780 AC013791.1-201ENST00000616619 62 ntBASIC-1.23□□□□□ -2.61
AP3S2P59780 RNY3-201ENST00000365484 102 ntBASIC-1.24□□□□□ -2.61
AP3S2P59780 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.24□□□□□ -2.61
AP3S2P59780 AC097635.1-201ENST00000450678 155 ntBASIC-1.24□□□□□ -2.61
AP3S2P59780 RNU7-74P-201ENST00000459104 62 ntBASIC-1.24□□□□□ -2.61
AP3S2P59780 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.24□□□□□ -2.61
AP3S2P59780 RNU6-911P-201ENST00000516523 104 ntBASIC-1.24□□□□□ -2.61
AP3S2P59780 SNORD38.3-201ENST00000516599 73 ntBASIC-1.24□□□□□ -2.61
AP3S2P59780 RNU7-35P-201ENST00000517174 62 ntBASIC-1.24□□□□□ -2.61
AP3S2P59780 AP000676.1-201ENST00000533307 52 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms