Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MIR7843-201ENST00000622274 79 ntBASIC1.64□□□□□ -2.15
CLRN1P58418 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CLRN1P58418 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLRN1P58418 SNORD33-201ENST00000362761 85 ntBASIC1.63□□□□□ -2.15
CLRN1P58418 RNA5SP48-201ENST00000363969 126 ntBASIC1.63□□□□□ -2.15
CLRN1P58418 MIR3937-201ENST00000580135 106 ntBASIC1.63□□□□□ -2.15
CLRN1P58418 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.63□□□□□ -2.15
CLRN1P58418 Z97988.1-201ENST00000637697 135 ntBASIC1.63□□□□□ -2.15
CLRN1P58418 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLRN1P58418 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CLRN1P58418 RNY4P6-201ENST00000363667 96 ntBASIC1.62□□□□□ -2.15
CLRN1P58418 Y_RNA.470-201ENST00000384307 117 ntBASIC1.62□□□□□ -2.15
CLRN1P58418 MIR583-201ENST00000384846 75 ntBASIC1.62□□□□□ -2.15
CLRN1P58418 AC090844.1-201ENST00000422019 156 ntBASIC1.62□□□□□ -2.15
CLRN1P58418 AC027119.1-201ENST00000440877 241 ntBASIC1.62□□□□□ -2.15
CLRN1P58418 AC113410.1-201ENST00000505029 247 ntBASIC1.62□□□□□ -2.15
CLRN1P58418 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.62□□□□□ -2.15
CLRN1P58418 MIR3163-201ENST00000581592 73 ntBASIC1.62□□□□□ -2.15
CLRN1P58418 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CLRN1P58418 SNORD114-1-201ENST00000362705 72 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 SNORA25.3-201ENST00000363205 127 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 SNORA22-201ENST00000383907 134 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 RNU6-1065P-201ENST00000384513 106 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 Y_RNA.549-201ENST00000384657 102 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 RNU6-602P-201ENST00000411155 105 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 MTATP6P29-201ENST00000415057 132 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 AC063976.4-201ENST00000421971 163 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 RPL39P39-201ENST00000455840 151 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 snoU13.25-201ENST00000458945 104 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 RPS23P4-201ENST00000487908 423 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 RNA5SP182-201ENST00000516064 82 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 RNA5SP33-201ENST00000516687 98 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 RNU7-6P-201ENST00000516845 62 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 CYP3A52P-201ENST00000563326 91 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 MIR4419B-201ENST00000577260 68 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
CLRN1P58418 SNORA63.4-201ENST00000362763 126 ntBASIC1.6□□□□□ -2.15
CLRN1P58418 SNORD115-2-201ENST00000362842 82 ntBASIC1.6□□□□□ -2.15
CLRN1P58418 SNORD115-20-201ENST00000365099 82 ntBASIC1.6□□□□□ -2.15
CLRN1P58418 MIR8065-201ENST00000620577 100 ntBASIC1.6□□□□□ -2.15
CLRN1P58418 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CLRN1P58418 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CLRN1P58418 Y_RNA.362-201ENST00000365518 110 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 MIR548D2-201ENST00000384955 97 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 SNORA40.18-201ENST00000391200 128 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.59□□□□□ -2.15
CLRN1P58418 RPL31P63-201ENST00000422565 375 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.59□□□□□ -2.15
CLRN1P58418 AC024614.2-201ENST00000577584 372 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 MIR4679-2-201ENST00000578358 77 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 MIR3664-201ENST00000579074 99 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 MIR4524B-201ENST00000581569 115 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 AC012493.3-201ENST00000604494 112 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 PRELID3BP2-201ENST00000605362 201 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 AL035470.1-201ENST00000622571 220 ntBASIC1.59□□□□□ -2.15
CLRN1P58418 SNORA63.5-201ENST00000363548 123 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 Y_RNA.281-201ENST00000364774 94 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 Y_RNA.354-201ENST00000365448 111 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 SNORD38B-201ENST00000384690 67 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 SNORD12C-201ENST00000386307 89 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 MIR1302-7-201ENST00000408841 72 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 RNU4-69P-201ENST00000410677 143 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 AC245047.7-201ENST00000440265 293 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 RPL30P7-201ENST00000479312 323 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 AL133373.1-201ENST00000497098 94 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 RNA5SP445-201ENST00000515889 115 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 AL512310.8-201ENST00000550183 120 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.58□□□□□ -2.16
CLRN1P58418 MIR548AE2-201ENST00000583456 67 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 AP000942.3-201ENST00000603702 160 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 SNORD38B-202ENST00000625943 69 ntBASIC1.58□□□□□ -2.16
CLRN1P58418 Y_RNA.299-201ENST00000364973 94 ntBASIC1.57□□□□□ -2.16
CLRN1P58418 Y_RNA.344-201ENST00000365381 112 ntBASIC1.57□□□□□ -2.16
CLRN1P58418 RPS27P16-201ENST00000425758 201 ntBASIC1.57□□□□□ -2.16
CLRN1P58418 PDCD5P2-201ENST00000507570 312 ntBASIC1.57□□□□□ -2.16
CLRN1P58418 RNU6-412P-201ENST00000516434 106 ntBASIC1.57□□□□□ -2.16
CLRN1P58418 RNU6-165P-201ENST00000517170 99 ntBASIC1.57□□□□□ -2.16
CLRN1P58418 AC087741.2-201ENST00000619415 172 ntBASIC1.57□□□□□ -2.16
CLRN1P58418 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CLRN1P58418 Y_RNA.85-201ENST00000363014 111 ntBASIC1.56□□□□□ -2.16
CLRN1P58418 SNORA32-201ENST00000384072 121 ntBASIC1.56□□□□□ -2.16
CLRN1P58418 RNU6-342P-201ENST00000384521 104 ntBASIC1.56□□□□□ -2.16
CLRN1P58418 MIR9-3-201ENST00000385084 90 ntBASIC1.56□□□□□ -2.16
CLRN1P58418 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
CLRN1P58418 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
CLRN1P58418 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.56□□□□□ -2.16
CLRN1P58418 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
CLRN1P58418 AL589743.1-201ENST00000551932 2712 ntBASIC1.55□□□□□ -2.16
CLRN1P58418 RNU6-1107P-201ENST00000364817 104 ntBASIC1.55□□□□□ -2.16
CLRN1P58418 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CLRN1P58418 AC244023.1-201ENST00000426884 112 ntBASIC1.55□□□□□ -2.16
CLRN1P58418 MIR1270-201ENST00000459320 83 ntBASIC1.55□□□□□ -2.16
CLRN1P58418 RPS29P11-201ENST00000496507 171 ntBASIC1.55□□□□□ -2.16
CLRN1P58418 AC108210.2-201ENST00000503681 201 ntBASIC1.55□□□□□ -2.16
CLRN1P58418 AP003716.2-201ENST00000528260 108 ntBASIC1.55□□□□□ -2.16
CLRN1P58418 AC242498.1-201ENST00000604134 111 ntBASIC1.55□□□□□ -2.16
CLRN1P58418 AC084768.2-201ENST00000622736 221 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms