Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 uc_338.28-201ENST00000612082 187 ntBASIC1.74□□□□□ -2.13
WNT3AP56704 SNORA1.1-201ENST00000364671 133 ntBASIC1.73□□□□□ -2.13
WNT3AP56704 Y_RNA.362-201ENST00000365518 110 ntBASIC1.73□□□□□ -2.13
WNT3AP56704 MIR1289-2-201ENST00000408360 111 ntBASIC1.73□□□□□ -2.13
WNT3AP56704 snoU13.16-201ENST00000459350 104 ntBASIC1.73□□□□□ -2.13
WNT3AP56704 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
WNT3AP56704 MIR548AO-201ENST00000579992 96 ntBASIC1.73□□□□□ -2.13
WNT3AP56704 MIR3163-201ENST00000581592 73 ntBASIC1.73□□□□□ -2.13
WNT3AP56704 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.73□□□□□ -2.13
WNT3AP56704 MIR8081-201ENST00000611533 95 ntBASIC1.73□□□□□ -2.13
WNT3AP56704 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
WNT3AP56704 RNY4P6-201ENST00000363667 96 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 Y_RNA.470-201ENST00000384307 117 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 Y_RNA.531-201ENST00000384589 121 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 RNA5SP261-201ENST00000410536 106 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 snoU13.26-201ENST00000459452 105 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 AC079140.2-201ENST00000506193 142 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 AC008834.1-201ENST00000511612 175 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 RNU6-250P-201ENST00000516958 103 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 AL357312.1-201ENST00000603879 298 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 GHRLOS.1-201ENST00000610995 70 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.72□□□□□ -2.13
WNT3AP56704 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
WNT3AP56704 Y_RNA.116-201ENST00000363292 103 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 RNU6-1107P-201ENST00000364817 104 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 SNORD1A-201ENST00000364968 72 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 Y_RNA.344-201ENST00000365381 112 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 MIR548D2-201ENST00000384955 97 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 RPS3AP1-201ENST00000413190 320 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.71□□□□□ -2.14
WNT3AP56704 RNU6-412P-201ENST00000516434 106 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 RNA5SP33-201ENST00000516687 98 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.71□□□□□ -2.14
WNT3AP56704 AL096861.1-201ENST00000610899 123 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 MIR6841-201ENST00000637129 72 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 AL589743.1-201ENST00000551932 2712 ntBASIC1.71□□□□□ -2.14
WNT3AP56704 MIR450A1-201ENST00000362262 91 ntBASIC1.7□□□□□ -2.14
WNT3AP56704 SNORA25.3-201ENST00000363205 127 ntBASIC1.7□□□□□ -2.14
WNT3AP56704 SNORA32-201ENST00000384072 121 ntBASIC1.7□□□□□ -2.14
WNT3AP56704 AC090844.1-201ENST00000422019 156 ntBASIC1.7□□□□□ -2.14
WNT3AP56704 AC009474.2-201ENST00000451383 136 ntBASIC1.7□□□□□ -2.14
WNT3AP56704 RPS23P4-201ENST00000487908 423 ntBASIC1.7□□□□□ -2.14
WNT3AP56704 CYP3A52P-201ENST00000563326 91 ntBASIC1.7□□□□□ -2.14
WNT3AP56704 MIR548AE2-201ENST00000583456 67 ntBASIC1.7□□□□□ -2.14
WNT3AP56704 MIR3192-201ENST00000584920 77 ntBASIC1.7□□□□□ -2.14
WNT3AP56704 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
WNT3AP56704 MIR302D-201ENST00000362275 68 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 SNORD33-201ENST00000362761 85 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 Y_RNA.85-201ENST00000363014 111 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 RNA5SP48-201ENST00000363969 126 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 RNU6-755P-201ENST00000364400 103 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 Y_RNA.281-201ENST00000364774 94 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 SNORA26.9-201ENST00000391322 122 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 RPL39P39-201ENST00000455840 151 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 RNU6-893P-201ENST00000458841 100 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 AC113410.1-201ENST00000505029 247 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 AC012493.3-201ENST00000604494 112 ntBASIC1.69□□□□□ -2.14
WNT3AP56704 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
WNT3AP56704 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.69□□□□□ -2.14
WNT3AP56704 RNU6-147P-201ENST00000383983 107 ntBASIC1.68□□□□□ -2.14
WNT3AP56704 RNU6-1065P-201ENST00000384513 106 ntBASIC1.68□□□□□ -2.14
WNT3AP56704 RPL39P34-201ENST00000477141 156 ntBASIC1.68□□□□□ -2.14
WNT3AP56704 MIR8055-201ENST00000610739 97 ntBASIC1.68□□□□□ -2.14
WNT3AP56704 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
WNT3AP56704 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
WNT3AP56704 AL161722.3-201ENST00000605789 2983 ntBASIC1.67□□□□□ -2.14
WNT3AP56704 MIR504-201ENST00000385065 83 ntBASIC1.67□□□□□ -2.14
WNT3AP56704 AC245047.7-201ENST00000440265 293 ntBASIC1.67□□□□□ -2.14
WNT3AP56704 RNA5SP445-201ENST00000515889 115 ntBASIC1.67□□□□□ -2.14
WNT3AP56704 Y_RNA.430-201ENST00000384081 110 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 RNU6-342P-201ENST00000384521 104 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 MIR934-201ENST00000401241 83 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 RNU6-554P-201ENST00000410466 106 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 RNU4-69P-201ENST00000410677 143 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 RNU6-602P-201ENST00000411155 105 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.66□□□□□ -2.14
WNT3AP56704 AL031737.1-201ENST00000450125 223 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 SNORA25.15-201ENST00000516487 89 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 MIR4679-2-201ENST00000578358 77 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 MIR4255-201ENST00000579351 72 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 MIR502-201ENST00000606349 86 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 AC087741.2-201ENST00000619415 172 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 MIR1255B1-201ENST00000636325 63 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 Z97988.1-201ENST00000637697 135 ntBASIC1.66□□□□□ -2.14
WNT3AP56704 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
WNT3AP56704 Y_RNA.49-201ENST00000362714 112 ntBASIC1.65□□□□□ -2.15
WNT3AP56704 U8.6-201ENST00000364939 135 ntBASIC1.65□□□□□ -2.15
WNT3AP56704 RNU6-106P-201ENST00000384405 107 ntBASIC1.65□□□□□ -2.15
WNT3AP56704 RNU6-1237P-201ENST00000384777 107 ntBASIC1.65□□□□□ -2.15
WNT3AP56704 RPL39P25-201ENST00000449384 154 ntBASIC1.65□□□□□ -2.15
WNT3AP56704 MIR4422-201ENST00000581938 83 ntBASIC1.65□□□□□ -2.15
WNT3AP56704 Y_RNA.773-201ENST00000607168 90 ntBASIC1.65□□□□□ -2.15
WNT3AP56704 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
WNT3AP56704 MIR8065-201ENST00000620577 100 ntBASIC1.65□□□□□ -2.15
WNT3AP56704 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
WNT3AP56704 Y_RNA.163-201ENST00000363702 113 ntBASIC1.64□□□□□ -2.15
WNT3AP56704 Y_RNA.299-201ENST00000364973 94 ntBASIC1.64□□□□□ -2.15
WNT3AP56704 RNU6-1014P-201ENST00000383940 103 ntBASIC1.64□□□□□ -2.15
WNT3AP56704 SNORA18-201ENST00000384416 132 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 256 ms