Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
NUBP1P53384 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NUBP1P53384 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
NUBP1P53384 AC016717.2-201ENST00000609089 5141 ntBASIC3.53□□□□□ -1.84
NUBP1P53384 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NUBP1P53384 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUBP1P53384 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.52□□□□□ -1.85
NUBP1P53384 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NUBP1P53384 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUBP1P53384 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NUBP1P53384 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.52□□□□□ -1.85
NUBP1P53384 RNU6-340P-201ENST00000364005 107 ntBASIC3.52□□□□□ -1.85
NUBP1P53384 RNU6-154P-201ENST00000384306 106 ntBASIC3.52□□□□□ -1.85
NUBP1P53384 SNORD90-201ENST00000391145 111 ntBASIC3.52□□□□□ -1.85
NUBP1P53384 snoU13.17-201ENST00000458802 104 ntBASIC3.52□□□□□ -1.85
NUBP1P53384 MIR2115-201ENST00000516657 100 ntBASIC3.52□□□□□ -1.85
NUBP1P53384 GTF3AP2-201ENST00000557014 266 ntBASIC3.52□□□□□ -1.85
NUBP1P53384 AC005520.4-201ENST00000604337 90 ntBASIC3.52□□□□□ -1.85
NUBP1P53384 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.52□□□□□ -1.85
NUBP1P53384 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.52□□□□□ -1.85
NUBP1P53384 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUBP1P53384 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUBP1P53384 Y_RNA.207-201ENST00000364142 106 ntBASIC3.51□□□□□ -1.85
NUBP1P53384 SNORA48.8-201ENST00000391324 134 ntBASIC3.51□□□□□ -1.85
NUBP1P53384 RNA5SP344-201ENST00000411081 104 ntBASIC3.51□□□□□ -1.85
NUBP1P53384 RPS27P16-201ENST00000425758 201 ntBASIC3.51□□□□□ -1.85
NUBP1P53384 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.51□□□□□ -1.85
NUBP1P53384 AP004217.1-201ENST00000480579 346 ntBASIC3.51□□□□□ -1.85
NUBP1P53384 RNU6-579P-201ENST00000516879 102 ntBASIC3.51□□□□□ -1.85
NUBP1P53384 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
NUBP1P53384 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.51□□□□□ -1.85
NUBP1P53384 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.51□□□□□ -1.85
NUBP1P53384 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
NUBP1P53384 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUBP1P53384 RNU6-203P-201ENST00000384038 104 ntBASIC3.5□□□□□ -1.85
NUBP1P53384 RNU6-291P-201ENST00000384720 107 ntBASIC3.5□□□□□ -1.85
NUBP1P53384 MT-TN-201ENST00000387400 73 ntBASIC3.5□□□□□ -1.85
NUBP1P53384 RNU6-630P-201ENST00000391258 106 ntBASIC3.5□□□□□ -1.85
NUBP1P53384 SNORA31.17-201ENST00000516953 127 ntBASIC3.5□□□□□ -1.85
NUBP1P53384 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.5□□□□□ -1.85
NUBP1P53384 AL033523.1-201ENST00000605153 153 ntBASIC3.5□□□□□ -1.85
NUBP1P53384 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.5□□□□□ -1.85
NUBP1P53384 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.5□□□□□ -1.85
NUBP1P53384 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUBP1P53384 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.5□□□□□ -1.85
NUBP1P53384 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUBP1P53384 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUBP1P53384 UBBP3-201ENST00000445497 241 ntBASIC3.49□□□□□ -1.85
NUBP1P53384 MIR3675-201ENST00000583661 73 ntBASIC3.49□□□□□ -1.85
NUBP1P53384 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
NUBP1P53384 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
NUBP1P53384 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NUBP1P53384 MIR101-2-201ENST00000362195 79 ntBASIC3.48□□□□□ -1.85
NUBP1P53384 RNU6-330P-201ENST00000363015 107 ntBASIC3.48□□□□□ -1.85
NUBP1P53384 RNA5SP259-201ENST00000365541 109 ntBASIC3.48□□□□□ -1.85
NUBP1P53384 RNU6-499P-201ENST00000365615 107 ntBASIC3.48□□□□□ -1.85
NUBP1P53384 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.48□□□□□ -1.85
NUBP1P53384 RNU6-205P-201ENST00000390858 107 ntBASIC3.48□□□□□ -1.85
NUBP1P53384 RNA5SP270-201ENST00000411361 118 ntBASIC3.48□□□□□ -1.85
NUBP1P53384 MIR4491-201ENST00000581087 68 ntBASIC3.48□□□□□ -1.85
NUBP1P53384 AP000942.3-201ENST00000603702 160 ntBASIC3.48□□□□□ -1.85
NUBP1P53384 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NUBP1P53384 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NUBP1P53384 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUBP1P53384 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.47□□□□□ -1.85
NUBP1P53384 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUBP1P53384 SNORA25.4-201ENST00000363666 124 ntBASIC3.47□□□□□ -1.85
NUBP1P53384 RPL30P7-201ENST00000479312 323 ntBASIC3.47□□□□□ -1.85
NUBP1P53384 MIR548H5-201ENST00000580314 60 ntBASIC3.47□□□□□ -1.85
NUBP1P53384 MIR4435-1-201ENST00000582552 80 ntBASIC3.47□□□□□ -1.85
NUBP1P53384 MIR8053-201ENST00000613344 75 ntBASIC3.47□□□□□ -1.85
NUBP1P53384 AL137790.1-201ENST00000634283 177 ntBASIC3.47□□□□□ -1.85
NUBP1P53384 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUBP1P53384 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUBP1P53384 MIR194-1-201ENST00000384892 85 ntBASIC3.46□□□□□ -1.86
NUBP1P53384 SNORD93-201ENST00000408813 74 ntBASIC3.46□□□□□ -1.86
NUBP1P53384 RPS29P31-201ENST00000446147 164 ntBASIC3.46□□□□□ -1.86
NUBP1P53384 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.46□□□□□ -1.86
NUBP1P53384 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
NUBP1P53384 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NUBP1P53384 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
NUBP1P53384 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
NUBP1P53384 MIR1302-7-201ENST00000408841 72 ntBASIC3.45□□□□□ -1.86
NUBP1P53384 RNA5SP208-201ENST00000516156 78 ntBASIC3.45□□□□□ -1.86
NUBP1P53384 SNORA25.16-201ENST00000516741 121 ntBASIC3.45□□□□□ -1.86
NUBP1P53384 AC008011.1-201ENST00000545989 227 ntBASIC3.45□□□□□ -1.86
NUBP1P53384 MIR3192-201ENST00000584920 77 ntBASIC3.45□□□□□ -1.86
NUBP1P53384 U4.6-201ENST00000621618 127 ntBASIC3.45□□□□□ -1.86
NUBP1P53384 MIR513A1-201ENST00000385138 129 ntBASIC3.44□□□□□ -1.86
NUBP1P53384 RN7SL274P-201ENST00000492268 272 ntBASIC3.44□□□□□ -1.86
NUBP1P53384 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.44□□□□□ -1.86
NUBP1P53384 SNORA9.3-201ENST00000516383 129 ntBASIC3.44□□□□□ -1.86
NUBP1P53384 U4.3-201ENST00000621047 82 ntBASIC3.44□□□□□ -1.86
NUBP1P53384 AC073325.2-201ENST00000339545 159 ntBASIC3.43□□□□□ -1.86
NUBP1P53384 Y_RNA.536-201ENST00000384621 113 ntBASIC3.43□□□□□ -1.86
NUBP1P53384 SNORD100-201ENST00000408573 76 ntBASIC3.43□□□□□ -1.86
NUBP1P53384 MIR1261-201ENST00000408659 82 ntBASIC3.43□□□□□ -1.86
NUBP1P53384 Y_RNA.606-201ENST00000410579 103 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms