Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SNORA70.7-201ENST00000384159 133 ntBASIC2.51□□□□□ -2.01
USP11P51784 MIR504-201ENST00000385065 83 ntBASIC2.51□□□□□ -2.01
USP11P51784 SNORA48.3-201ENST00000391081 134 ntBASIC2.51□□□□□ -2.01
USP11P51784 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.51□□□□□ -2.01
USP11P51784 RNU6-887P-201ENST00000410660 100 ntBASIC2.51□□□□□ -2.01
USP11P51784 RNU2-40P-201ENST00000410833 196 ntBASIC2.51□□□□□ -2.01
USP11P51784 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.51□□□□□ -2.01
USP11P51784 HMGN1P33-201ENST00000432945 451 ntBASIC2.51□□□□□ -2.01
USP11P51784 snoU13.15-201ENST00000459407 104 ntBASIC2.51□□□□□ -2.01
USP11P51784 Y_RNA.705-201ENST00000516862 110 ntBASIC2.51□□□□□ -2.01
USP11P51784 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.51□□□□□ -2.01
USP11P51784 MIR1273D-201ENST00000577266 86 ntBASIC2.51□□□□□ -2.01
USP11P51784 AC021506.2-201ENST00000612354 169 ntBASIC2.51□□□□□ -2.01
USP11P51784 AL512310.12-203ENST00000640543 90 ntBASIC2.51□□□□□ -2.01
USP11P51784 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP11P51784 SNORD116-22-201ENST00000384430 92 ntBASIC2.5□□□□□ -2.01
USP11P51784 RNU6-950P-201ENST00000384651 107 ntBASIC2.5□□□□□ -2.01
USP11P51784 RNU6-1307P-201ENST00000391012 103 ntBASIC2.5□□□□□ -2.01
USP11P51784 AC099513.1-201ENST00000490423 301 ntBASIC2.5□□□□□ -2.01
USP11P51784 SUB1P4-201ENST00000566062 339 ntBASIC2.5□□□□□ -2.01
USP11P51784 MIR5588-201ENST00000581890 63 ntBASIC2.5□□□□□ -2.01
USP11P51784 MIR376B-201ENST00000614515 100 ntBASIC2.5□□□□□ -2.01
USP11P51784 AC245884.12-201ENST00000615364 59 ntBASIC2.5□□□□□ -2.01
USP11P51784 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USP11P51784 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USP11P51784 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USP11P51784 RNU6-296P-201ENST00000384608 107 ntBASIC2.49□□□□□ -2.01
USP11P51784 RN7SKP223-201ENST00000410582 62 ntBASIC2.49□□□□□ -2.01
USP11P51784 AC090844.1-201ENST00000422019 156 ntBASIC2.49□□□□□ -2.01
USP11P51784 AC108729.3-201ENST00000513484 108 ntBASIC2.49□□□□□ -2.01
USP11P51784 RNA5SP137-201ENST00000516833 135 ntBASIC2.49□□□□□ -2.01
USP11P51784 RNU6-1006P-201ENST00000516998 103 ntBASIC2.49□□□□□ -2.01
USP11P51784 MIR6132-201ENST00000622083 109 ntBASIC2.49□□□□□ -2.01
USP11P51784 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.49□□□□□ -2.01
USP11P51784 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USP11P51784 AC005336.3-201ENST00000623833 2679 ntBASIC2.49□□□□□ -2.01
USP11P51784 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.48□□□□□ -2.01
USP11P51784 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USP11P51784 SNORD58A-201ENST00000383875 65 ntBASIC2.48□□□□□ -2.01
USP11P51784 RNU6-242P-201ENST00000384359 107 ntBASIC2.48□□□□□ -2.01
USP11P51784 RNU6-342P-201ENST00000384521 104 ntBASIC2.48□□□□□ -2.01
USP11P51784 MIR4648-201ENST00000580107 72 ntBASIC2.48□□□□□ -2.01
USP11P51784 MIR8055-201ENST00000610739 97 ntBASIC2.48□□□□□ -2.01
USP11P51784 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.48□□□□□ -2.01
USP11P51784 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USP11P51784 AL596028.1-201ENST00000326971 197 ntBASIC2.47□□□□□ -2.01
USP11P51784 RNU6-112P-201ENST00000363599 104 ntBASIC2.47□□□□□ -2.01
USP11P51784 SNORA3A-201ENST00000364113 130 ntBASIC2.47□□□□□ -2.01
USP11P51784 SNORA1.1-201ENST00000364671 133 ntBASIC2.47□□□□□ -2.01
USP11P51784 Y_RNA.313-201ENST00000365095 103 ntBASIC2.47□□□□□ -2.01
USP11P51784 RNU6-813P-201ENST00000384691 107 ntBASIC2.47□□□□□ -2.01
USP11P51784 MIR518A2-201ENST00000384966 87 ntBASIC2.47□□□□□ -2.01
USP11P51784 SNORA48.1-201ENST00000390879 135 ntBASIC2.47□□□□□ -2.01
USP11P51784 U8.15-201ENST00000390947 134 ntBASIC2.47□□□□□ -2.01
USP11P51784 RNA5SP261-201ENST00000410536 106 ntBASIC2.47□□□□□ -2.01
USP11P51784 Y_RNA.620-201ENST00000411009 88 ntBASIC2.47□□□□□ -2.01
USP11P51784 RNU6-237P-201ENST00000515985 71 ntBASIC2.47□□□□□ -2.01
USP11P51784 Y_RNA.96-201ENST00000363092 109 ntBASIC2.46□□□□□ -2.02
USP11P51784 RNU6-1125P-201ENST00000363601 107 ntBASIC2.46□□□□□ -2.02
USP11P51784 RNU6-1163P-201ENST00000364516 107 ntBASIC2.46□□□□□ -2.02
USP11P51784 MIR520A-201ENST00000384862 85 ntBASIC2.46□□□□□ -2.02
USP11P51784 MIR660-201ENST00000385235 97 ntBASIC2.46□□□□□ -2.02
USP11P51784 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.46□□□□□ -2.02
USP11P51784 RNU7-171P-201ENST00000459581 62 ntBASIC2.46□□□□□ -2.02
USP11P51784 RNU7-2P-201ENST00000516096 62 ntBASIC2.46□□□□□ -2.02
USP11P51784 MIR4666B-201ENST00000578142 81 ntBASIC2.46□□□□□ -2.02
USP11P51784 MIR4668-201ENST00000582284 70 ntBASIC2.46□□□□□ -2.02
USP11P51784 MIR4439-201ENST00000583746 80 ntBASIC2.46□□□□□ -2.02
USP11P51784 MIR6873-201ENST00000622788 63 ntBASIC2.46□□□□□ -2.02
USP11P51784 Y_RNA.140-201ENST00000363474 103 ntBASIC2.45□□□□□ -2.02
USP11P51784 AC104435.1-201ENST00000483483 166 ntBASIC2.45□□□□□ -2.02
USP11P51784 MIR514B-201ENST00000516774 80 ntBASIC2.45□□□□□ -2.02
USP11P51784 MIR4524B-201ENST00000581569 115 ntBASIC2.45□□□□□ -2.02
USP11P51784 AC096720.1-201ENST00000604441 183 ntBASIC2.45□□□□□ -2.02
USP11P51784 SEPT14P17-201ENST00000617978 177 ntBASIC2.45□□□□□ -2.02
USP11P51784 AL513423.1-201ENST00000621695 132 ntBASIC2.45□□□□□ -2.02
USP11P51784 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.45□□□□□ -2.02
USP11P51784 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
USP11P51784 RNU6-457P-201ENST00000363999 107 ntBASIC2.44□□□□□ -2.02
USP11P51784 Y_RNA.244-201ENST00000364484 109 ntBASIC2.44□□□□□ -2.02
USP11P51784 RNY1P4-201ENST00000384595 115 ntBASIC2.44□□□□□ -2.02
USP11P51784 Y_RNA.537-201ENST00000384626 109 ntBASIC2.44□□□□□ -2.02
USP11P51784 MIR206-201ENST00000384872 86 ntBASIC2.44□□□□□ -2.02
USP11P51784 HMGN2P39-201ENST00000398005 273 ntBASIC2.44□□□□□ -2.02
USP11P51784 RNA5SP501-201ENST00000410990 112 ntBASIC2.44□□□□□ -2.02
USP11P51784 HMGN2P38-201ENST00000423806 265 ntBASIC2.44□□□□□ -2.02
USP11P51784 RNU6-86P-201ENST00000606534 107 ntBASIC2.44□□□□□ -2.02
USP11P51784 AC103810.7-201ENST00000607821 91 ntBASIC2.44□□□□□ -2.02
USP11P51784 MIR219B-201ENST00000637023 88 ntBASIC2.44□□□□□ -2.02
USP11P51784 MIRLET7G-201ENST00000362280 84 ntBASIC2.43□□□□□ -2.02
USP11P51784 RNA5SP465-201ENST00000391195 109 ntBASIC2.43□□□□□ -2.02
USP11P51784 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USP11P51784 RNU7-193P-201ENST00000516723 65 ntBASIC2.43□□□□□ -2.02
USP11P51784 RNU7-35P-201ENST00000517174 62 ntBASIC2.43□□□□□ -2.02
USP11P51784 MIR4709-201ENST00000577272 72 ntBASIC2.43□□□□□ -2.02
USP11P51784 MIR8065-201ENST00000620577 100 ntBASIC2.43□□□□□ -2.02
USP11P51784 SNORD3E-202ENST00000627253 216 ntBASIC2.43□□□□□ -2.02
USP11P51784 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP11P51784 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
USP11P51784 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms