Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
GPC1P35052 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
GPC1P35052 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
GPC1P35052 MIR1236-201ENST00000408340 102 ntBASIC2.66□□□□□ -1.98
GPC1P35052 EEF1A1P41-201ENST00000414667 207 ntBASIC2.66□□□□□ -1.98
GPC1P35052 AC087499.7-201ENST00000441958 109 ntBASIC2.66□□□□□ -1.98
GPC1P35052 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.98
GPC1P35052 AC141846.1-201ENST00000568348 142 ntBASIC2.66□□□□□ -1.98
GPC1P35052 MIR3935-201ENST00000583472 104 ntBASIC2.66□□□□□ -1.98
GPC1P35052 U7.4-201ENST00000614961 63 ntBASIC2.66□□□□□ -1.98
GPC1P35052 MIR8066-201ENST00000617280 78 ntBASIC2.66□□□□□ -1.98
GPC1P35052 SCARNA15.3-201ENST00000626315 122 ntBASIC2.66□□□□□ -1.98
GPC1P35052 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.66□□□□□ -1.98
GPC1P35052 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
GPC1P35052 RNU1-138P-201ENST00000384093 164 ntBASIC2.65□□□□□ -1.99
GPC1P35052 RNU6-129P-201ENST00000391022 107 ntBASIC2.65□□□□□ -1.99
GPC1P35052 SNORA25.13-201ENST00000516395 103 ntBASIC2.65□□□□□ -1.99
GPC1P35052 AC090897.1-201ENST00000580909 226 ntBASIC2.65□□□□□ -1.99
GPC1P35052 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
GPC1P35052 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.64□□□□□ -1.99
GPC1P35052 MIR26A1-201ENST00000362205 77 ntBASIC2.64□□□□□ -1.99
GPC1P35052 MIR634-201ENST00000385208 97 ntBASIC2.64□□□□□ -1.99
GPC1P35052 SNORA59A-201ENST00000459326 152 ntBASIC2.64□□□□□ -1.99
GPC1P35052 AC090255.1-201ENST00000495779 349 ntBASIC2.64□□□□□ -1.99
GPC1P35052 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
GPC1P35052 AP000753.3-201ENST00000604083 169 ntBASIC2.64□□□□□ -1.99
GPC1P35052 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
GPC1P35052 HSBP1P2-201ENST00000299671 229 ntBASIC2.63□□□□□ -1.99
GPC1P35052 Y_RNA.57-201ENST00000362806 113 ntBASIC2.63□□□□□ -1.99
GPC1P35052 S100A11P2-201ENST00000467589 312 ntBASIC2.63□□□□□ -1.99
GPC1P35052 AC003982.1-202ENST00000469928 248 ntBASIC2.63□□□□□ -1.99
GPC1P35052 RPS27P21-201ENST00000486977 252 ntBASIC2.63□□□□□ -1.99
GPC1P35052 RNA5SP445-201ENST00000515889 115 ntBASIC2.63□□□□□ -1.99
GPC1P35052 RNU7-41P-201ENST00000515917 61 ntBASIC2.63□□□□□ -1.99
GPC1P35052 EIF4BP1-201ENST00000554881 351 ntBASIC2.63□□□□□ -1.99
GPC1P35052 DEFB122-202ENST00000569013 197 ntBASIC2.63□□□□□ -1.99
GPC1P35052 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.63□□□□□ -1.99
GPC1P35052 MIR3605-201ENST00000583214 100 ntBASIC2.63□□□□□ -1.99
GPC1P35052 AL662814.1-201ENST00000617364 121 ntBASIC2.63□□□□□ -1.99
GPC1P35052 RNU6-315P-201ENST00000362666 107 ntBASIC2.62□□□□□ -1.99
GPC1P35052 AL450471.1-201ENST00000447509 127 ntBASIC2.62□□□□□ -1.99
GPC1P35052 SNORD4B-201ENST00000459083 72 ntBASIC2.62□□□□□ -1.99
GPC1P35052 MIR4500-201ENST00000579472 76 ntBASIC2.62□□□□□ -1.99
GPC1P35052 AC006023.1-201ENST00000603944 259 ntBASIC2.62□□□□□ -1.99
GPC1P35052 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
GPC1P35052 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
GPC1P35052 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
GPC1P35052 RNA5SP133-201ENST00000363368 119 ntBASIC2.61□□□□□ -1.99
GPC1P35052 RNA5SP393-201ENST00000363423 117 ntBASIC2.61□□□□□ -1.99
GPC1P35052 RNU6-478P-201ENST00000363904 110 ntBASIC2.61□□□□□ -1.99
GPC1P35052 RNY1P2-201ENST00000364820 117 ntBASIC2.61□□□□□ -1.99
GPC1P35052 RNU1-51P-201ENST00000365345 176 ntBASIC2.61□□□□□ -1.99
GPC1P35052 Y_RNA.545-201ENST00000384652 105 ntBASIC2.61□□□□□ -1.99
GPC1P35052 RNU4-83P-201ENST00000410863 133 ntBASIC2.61□□□□□ -1.99
GPC1P35052 RNA5SP270-201ENST00000411361 118 ntBASIC2.61□□□□□ -1.99
GPC1P35052 U1.36-201ENST00000620684 176 ntBASIC2.61□□□□□ -1.99
GPC1P35052 AC006386.2-201ENST00000624491 75 ntBASIC2.61□□□□□ -1.99
GPC1P35052 AC012005.1-201ENST00000624575 75 ntBASIC2.61□□□□□ -1.99
GPC1P35052 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
GPC1P35052 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.61□□□□□ -1.99
GPC1P35052 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
GPC1P35052 AL139132.1-201ENST00000431587 344 ntBASIC2.6□□□□□ -1.99
GPC1P35052 AC009474.2-201ENST00000451383 136 ntBASIC2.6□□□□□ -1.99
GPC1P35052 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.6□□□□□ -1.99
GPC1P35052 RNU6-322P-201ENST00000516010 103 ntBASIC2.6□□□□□ -1.99
GPC1P35052 SNORA31.17-201ENST00000516953 127 ntBASIC2.6□□□□□ -1.99
GPC1P35052 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.6□□□□□ -1.99
GPC1P35052 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
GPC1P35052 RNU6-1094P-201ENST00000362416 104 ntBASIC2.59□□□□□ -1.99
GPC1P35052 RNU6-203P-201ENST00000384038 104 ntBASIC2.59□□□□□ -1.99
GPC1P35052 SNORA44-201ENST00000384584 132 ntBASIC2.59□□□□□ -1.99
GPC1P35052 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.59□□□□□ -1.99
GPC1P35052 RNA5SP100-201ENST00000410903 110 ntBASIC2.59□□□□□ -1.99
GPC1P35052 RNA5SP59-201ENST00000410922 110 ntBASIC2.59□□□□□ -1.99
GPC1P35052 snoU13.11-201ENST00000459219 104 ntBASIC2.59□□□□□ -1.99
GPC1P35052 AC023790.1-201ENST00000482174 347 ntBASIC2.59□□□□□ -1.99
GPC1P35052 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.59□□□□□ -1.99
GPC1P35052 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.59□□□□□ -1.99
GPC1P35052 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.59□□□□□ -1.99
GPC1P35052 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.59□□□□□ -1.99
GPC1P35052 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
GPC1P35052 AL161722.3-201ENST00000605789 2983 ntBASIC2.58□□□□□ -2
GPC1P35052 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.58□□□□□ -2
GPC1P35052 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
GPC1P35052 RNU6-1123P-201ENST00000362347 106 ntBASIC2.58□□□□□ -2
GPC1P35052 RNU6-949P-201ENST00000384040 107 ntBASIC2.58□□□□□ -2
GPC1P35052 Y_RNA.508-201ENST00000384502 114 ntBASIC2.58□□□□□ -2
GPC1P35052 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.58□□□□□ -2
GPC1P35052 AL033523.1-201ENST00000605153 153 ntBASIC2.58□□□□□ -2
GPC1P35052 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.58□□□□□ -2
GPC1P35052 U6.109-201ENST00000636749 87 ntBASIC2.58□□□□□ -2
GPC1P35052 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
GPC1P35052 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
GPC1P35052 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.57□□□□□ -2
GPC1P35052 SNORA67.1-201ENST00000364749 141 ntBASIC2.57□□□□□ -2
GPC1P35052 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
GPC1P35052 AC087499.2-201ENST00000432861 149 ntBASIC2.57□□□□□ -2
GPC1P35052 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
GPC1P35052 RNU6-850P-201ENST00000516934 103 ntBASIC2.57□□□□□ -2
GPC1P35052 AC138749.4-201ENST00000563970 127 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 259.2 ms