Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 HSPE1P9-201ENST00000440046 311 ntBASIC1.91□□□□□ -2.1
KRT4P19013 RNU6-795P-201ENST00000516323 103 ntBASIC1.91□□□□□ -2.1
KRT4P19013 DNAJC19P9-201ENST00000555084 351 ntBASIC1.91□□□□□ -2.1
KRT4P19013 MIR5094-201ENST00000578766 85 ntBASIC1.91□□□□□ -2.1
KRT4P19013 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
KRT4P19013 IGLL4P-201ENST00000614590 133 ntBASIC1.91□□□□□ -2.1
KRT4P19013 U7.3-201ENST00000616123 62 ntBASIC1.91□□□□□ -2.1
KRT4P19013 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.91□□□□□ -2.1
KRT4P19013 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.91□□□□□ -2.1
KRT4P19013 SNORA22.1-201ENST00000362701 134 ntBASIC1.9□□□□□ -2.11
KRT4P19013 RNY1P1-201ENST00000364372 112 ntBASIC1.9□□□□□ -2.11
KRT4P19013 RNU6-60P-201ENST00000364792 103 ntBASIC1.9□□□□□ -2.11
KRT4P19013 Y_RNA.430-201ENST00000384081 110 ntBASIC1.9□□□□□ -2.11
KRT4P19013 SNORA24-201ENST00000384096 131 ntBASIC1.9□□□□□ -2.11
KRT4P19013 SNORA67.3-201ENST00000384366 140 ntBASIC1.9□□□□□ -2.11
KRT4P19013 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
KRT4P19013 RNU6-1031P-201ENST00000384773 107 ntBASIC1.9□□□□□ -2.11
KRT4P19013 RNU6-679P-201ENST00000391003 106 ntBASIC1.9□□□□□ -2.11
KRT4P19013 AL451046.2-201ENST00000403074 277 ntBASIC1.9□□□□□ -2.11
KRT4P19013 SNORA7.5-201ENST00000410672 110 ntBASIC1.9□□□□□ -2.11
KRT4P19013 RNU7-67P-201ENST00000459003 62 ntBASIC1.9□□□□□ -2.11
KRT4P19013 RNU7-45P-201ENST00000459460 63 ntBASIC1.9□□□□□ -2.11
KRT4P19013 RNA5SP33-201ENST00000516687 98 ntBASIC1.9□□□□□ -2.11
KRT4P19013 RNU6-1258P-201ENST00000516911 111 ntBASIC1.9□□□□□ -2.11
KRT4P19013 AC022254.1-201ENST00000567857 235 ntBASIC1.9□□□□□ -2.11
KRT4P19013 MIR6841-201ENST00000637129 72 ntBASIC1.9□□□□□ -2.11
KRT4P19013 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.9□□□□□ -2.11
KRT4P19013 AL353813.1-201ENST00000440700 253 ntBASIC1.89□□□□□ -2.11
KRT4P19013 RPS29P29-201ENST00000456396 171 ntBASIC1.89□□□□□ -2.11
KRT4P19013 RNU2-13P-201ENST00000515909 113 ntBASIC1.89□□□□□ -2.11
KRT4P19013 RNU6-958P-201ENST00000516995 106 ntBASIC1.89□□□□□ -2.11
KRT4P19013 MIR4713-201ENST00000582691 75 ntBASIC1.89□□□□□ -2.11
KRT4P19013 AC096720.1-201ENST00000604441 183 ntBASIC1.89□□□□□ -2.11
KRT4P19013 MIR3202-2-201ENST00000635980 79 ntBASIC1.89□□□□□ -2.11
KRT4P19013 MIR219B-201ENST00000637023 88 ntBASIC1.89□□□□□ -2.11
KRT4P19013 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KRT4P19013 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
KRT4P19013 Y_RNA.95-201ENST00000363079 95 ntBASIC1.88□□□□□ -2.11
KRT4P19013 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
KRT4P19013 RNU6-1201P-201ENST00000384227 107 ntBASIC1.88□□□□□ -2.11
KRT4P19013 Y_RNA.470-201ENST00000384307 117 ntBASIC1.88□□□□□ -2.11
KRT4P19013 RNU6-616P-201ENST00000384353 107 ntBASIC1.88□□□□□ -2.11
KRT4P19013 MIR516B2-201ENST00000385190 85 ntBASIC1.88□□□□□ -2.11
KRT4P19013 SNORA26.6-201ENST00000391256 115 ntBASIC1.88□□□□□ -2.11
KRT4P19013 RNU7-73P-201ENST00000458743 63 ntBASIC1.88□□□□□ -2.11
KRT4P19013 RNU6-162P-201ENST00000516228 103 ntBASIC1.88□□□□□ -2.11
KRT4P19013 Y_RNA.705-201ENST00000516862 110 ntBASIC1.88□□□□□ -2.11
KRT4P19013 MIR548AE2-201ENST00000583456 67 ntBASIC1.88□□□□□ -2.11
KRT4P19013 MIR4777-201ENST00000583710 86 ntBASIC1.88□□□□□ -2.11
KRT4P19013 MIR6717-201ENST00000622747 73 ntBASIC1.88□□□□□ -2.11
KRT4P19013 RNU6-1313P-201ENST00000362622 102 ntBASIC1.87□□□□□ -2.11
KRT4P19013 RNU6-1067P-201ENST00000384752 107 ntBASIC1.87□□□□□ -2.11
KRT4P19013 RNU6-972P-201ENST00000391208 107 ntBASIC1.87□□□□□ -2.11
KRT4P19013 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
KRT4P19013 AL356320.1-201ENST00000429616 163 ntBASIC1.87□□□□□ -2.11
KRT4P19013 AC022137.1-201ENST00000483735 151 ntBASIC1.87□□□□□ -2.11
KRT4P19013 RNVU1-2-201ENST00000516326 135 ntBASIC1.87□□□□□ -2.11
KRT4P19013 RNU6-521P-201ENST00000516663 105 ntBASIC1.87□□□□□ -2.11
KRT4P19013 MIR4439-201ENST00000583746 80 ntBASIC1.87□□□□□ -2.11
KRT4P19013 AC025521.1-201ENST00000621624 286 ntBASIC1.87□□□□□ -2.11
KRT4P19013 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.86□□□□□ -2.11
KRT4P19013 RNU6-675P-201ENST00000384236 104 ntBASIC1.86□□□□□ -2.11
KRT4P19013 RNU6-242P-201ENST00000384359 107 ntBASIC1.86□□□□□ -2.11
KRT4P19013 SNORD116-22-201ENST00000384430 92 ntBASIC1.86□□□□□ -2.11
KRT4P19013 MIR520A-201ENST00000384862 85 ntBASIC1.86□□□□□ -2.11
KRT4P19013 RNU6-887P-201ENST00000410660 100 ntBASIC1.86□□□□□ -2.11
KRT4P19013 Y_RNA.659-201ENST00000515994 113 ntBASIC1.86□□□□□ -2.11
KRT4P19013 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.86□□□□□ -2.11
KRT4P19013 AC243994.1-201ENST00000618627 109 ntBASIC1.86□□□□□ -2.11
KRT4P19013 AL513423.1-201ENST00000621695 132 ntBASIC1.86□□□□□ -2.11
KRT4P19013 AL512310.12-203ENST00000640543 90 ntBASIC1.86□□□□□ -2.11
KRT4P19013 AC091304.10-201ENST00000641554 121 ntBASIC1.86□□□□□ -2.11
KRT4P19013 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.86□□□□□ -2.11
KRT4P19013 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRT4P19013 SNORA1.1-201ENST00000364671 133 ntBASIC1.85□□□□□ -2.11
KRT4P19013 Y_RNA.537-201ENST00000384626 109 ntBASIC1.85□□□□□ -2.11
KRT4P19013 MIR634-201ENST00000385208 97 ntBASIC1.85□□□□□ -2.11
KRT4P19013 SNORA48.1-201ENST00000390879 135 ntBASIC1.85□□□□□ -2.11
KRT4P19013 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
KRT4P19013 RNU2-7P-201ENST00000410794 178 ntBASIC1.85□□□□□ -2.11
KRT4P19013 BTF3P4-201ENST00000418852 495 ntBASIC1.85□□□□□ -2.11
KRT4P19013 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.85□□□□□ -2.11
KRT4P19013 RPL39P39-201ENST00000455840 151 ntBASIC1.85□□□□□ -2.11
KRT4P19013 MIR1270-201ENST00000459320 83 ntBASIC1.85□□□□□ -2.11
KRT4P19013 RNU7-34P-201ENST00000459394 64 ntBASIC1.85□□□□□ -2.11
KRT4P19013 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
KRT4P19013 MIR548Z-201ENST00000584743 97 ntBASIC1.85□□□□□ -2.11
KRT4P19013 AL020996.3-201ENST00000606617 222 ntBASIC1.85□□□□□ -2.11
KRT4P19013 MIR4791-201ENST00000607666 84 ntBASIC1.85□□□□□ -2.11
KRT4P19013 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.85□□□□□ -2.11
KRT4P19013 SNORD3E-202ENST00000627253 216 ntBASIC1.85□□□□□ -2.11
KRT4P19013 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRT4P19013 RNU6-228P-201ENST00000362700 106 ntBASIC1.84□□□□□ -2.11
KRT4P19013 RNU6-1124P-201ENST00000384169 107 ntBASIC1.84□□□□□ -2.11
KRT4P19013 SNORD123-201ENST00000459473 70 ntBASIC1.84□□□□□ -2.11
KRT4P19013 AC108729.3-201ENST00000513484 108 ntBASIC1.84□□□□□ -2.11
KRT4P19013 RNA5SP481-201ENST00000516814 122 ntBASIC1.84□□□□□ -2.11
KRT4P19013 MIR548AR-201ENST00000582191 57 ntBASIC1.84□□□□□ -2.11
KRT4P19013 Y_RNA.190-201ENST00000363964 101 ntBASIC1.83□□□□□ -2.12
KRT4P19013 SNORD115-35-201ENST00000365122 82 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms