Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 Y_RNA.548-201ENST00000384656 105 ntBASIC-3.18□□□□□ -2.92
VCANP13611 MIR548N-201ENST00000408742 75 ntBASIC-3.18□□□□□ -2.92
VCANP13611 AC073415.1-201ENST00000449240 153 ntBASIC-3.18□□□□□ -2.92
VCANP13611 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-3.18□□□□□ -2.92
VCANP13611 AL158063.1-201ENST00000615349 536 ntBASIC-3.18□□□□□ -2.92
VCANP13611 RNU6-223P-201ENST00000362830 107 ntBASIC-3.19□□□□□ -2.92
VCANP13611 RNU6-478P-201ENST00000363904 110 ntBASIC-3.19□□□□□ -2.92
VCANP13611 Y_RNA.470-201ENST00000384307 117 ntBASIC-3.19□□□□□ -2.92
VCANP13611 RNU6-1000P-201ENST00000391066 106 ntBASIC-3.19□□□□□ -2.92
VCANP13611 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-3.19□□□□□ -2.92
VCANP13611 TUSC7.1-201ENST00000610969 165 ntBASIC-3.19□□□□□ -2.92
VCANP13611 AC006435.5-201ENST00000624486 112 ntBASIC-3.19□□□□□ -2.92
VCANP13611 RNU6-1057P-201ENST00000517162 102 ntBASIC-3.19□□□□□ -2.92
VCANP13611 RNU6-282P-201ENST00000365357 103 ntBASIC-3.2□□□□□ -2.92
VCANP13611 AC078809.1-201ENST00000427601 140 ntBASIC-3.2□□□□□ -2.92
VCANP13611 AC078880.5-201ENST00000617845 421 ntBASIC-3.2□□□□□ -2.92
VCANP13611 AC073343.1-201ENST00000328239 651 ntBASIC-3.2□□□□□ -2.92
VCANP13611 MIR208B-201ENST00000401172 77 ntBASIC-3.2□□□□□ -2.92
VCANP13611 UBE2D3P4-201ENST00000441973 436 ntBASIC-3.2□□□□□ -2.92
VCANP13611 RNU7-154P-201ENST00000516194 62 ntBASIC-3.2□□□□□ -2.92
VCANP13611 U6.109-201ENST00000636749 87 ntBASIC-3.2□□□□□ -2.92
VCANP13611 RNU4-85P-201ENST00000364675 123 ntBASIC-3.2□□□□□ -2.92
VCANP13611 Y_RNA.687-201ENST00000516558 91 ntBASIC-3.2□□□□□ -2.92
VCANP13611 RNU6-1315P-201ENST00000517187 99 ntBASIC-3.2□□□□□ -2.92
VCANP13611 AC109479.2-201ENST00000517842 174 ntBASIC-3.2□□□□□ -2.92
VCANP13611 AC144568.1-201ENST00000520139 137 ntBASIC-3.2□□□□□ -2.92
VCANP13611 SNORD50B-201ENST00000364995 70 ntBASIC-3.21□□□□□ -2.92
VCANP13611 MIR3170-201ENST00000582699 77 ntBASIC-3.21□□□□□ -2.92
VCANP13611 RNU5E-7P-201ENST00000365290 117 ntBASIC-3.21□□□□□ -2.92
VCANP13611 Y_RNA.534-201ENST00000384599 112 ntBASIC-3.21□□□□□ -2.92
VCANP13611 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.21□□□□□ -2.92
VCANP13611 AC012467.1-201ENST00000607740 256 ntBASIC-3.21□□□□□ -2.92
VCANP13611 Y_RNA.237-201ENST00000364439 102 ntBASIC-3.21□□□□□ -2.92
VCANP13611 MTATP6P21-201ENST00000440681 189 ntBASIC-3.21□□□□□ -2.92
VCANP13611 AC027807.2-201ENST00000616099 408 ntBASIC-3.21□□□□□ -2.92
VCANP13611 RNU6-395P-201ENST00000365662 106 ntBASIC-3.22□□□□□ -2.92
VCANP13611 SNORD65B-201ENST00000459126 73 ntBASIC-3.22□□□□□ -2.92
VCANP13611 SNRPGP7-201ENST00000469016 106 ntBASIC-3.22□□□□□ -2.92
VCANP13611 SNORD42B-201ENST00000458893 67 ntBASIC-3.22□□□□□ -2.93
VCANP13611 SNORD116-25-201ENST00000516517 92 ntBASIC-3.22□□□□□ -2.93
VCANP13611 Y_RNA.22-201ENST00000362492 102 ntBASIC-3.23□□□□□ -2.93
VCANP13611 Y_RNA.404-201ENST00000383978 102 ntBASIC-3.23□□□□□ -2.93
VCANP13611 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-3.23□□□□□ -2.93
VCANP13611 MTND1P33-201ENST00000446251 917 ntBASIC-3.23□□□□□ -2.93
VCANP13611 NDUFA5P7-201ENST00000452914 242 ntBASIC-3.23□□□□□ -2.93
VCANP13611 RNU6-344P-201ENST00000516635 111 ntBASIC-3.23□□□□□ -2.93
VCANP13611 CYP3A54P-201ENST00000566950 75 ntBASIC-3.23□□□□□ -2.93
VCANP13611 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-3.23□□□□□ -2.93
VCANP13611 RNU6-433P-201ENST00000363216 104 ntBASIC-3.23□□□□□ -2.93
VCANP13611 Y_RNA.165-201ENST00000363721 102 ntBASIC-3.23□□□□□ -2.93
VCANP13611 RNU6-329P-201ENST00000459618 107 ntBASIC-3.23□□□□□ -2.93
VCANP13611 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-3.23□□□□□ -2.93
VCANP13611 RNU6-238P-201ENST00000363313 106 ntBASIC-3.24□□□□□ -2.93
VCANP13611 AL031003.1-201ENST00000404229 172 ntBASIC-3.24□□□□□ -2.93
VCANP13611 HIF1AP1-201ENST00000553642 175 ntBASIC-3.24□□□□□ -2.93
VCANP13611 AC084781.2-201ENST00000615568 161 ntBASIC-3.24□□□□□ -2.93
VCANP13611 RNU6-1066P-201ENST00000363573 105 ntBASIC-3.24□□□□□ -2.93
VCANP13611 RNU2-39P-201ENST00000410604 198 ntBASIC-3.24□□□□□ -2.93
VCANP13611 AL020997.3-201ENST00000602843 359 ntBASIC-3.24□□□□□ -2.93
VCANP13611 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-3.24□□□□□ -2.93
VCANP13611 SNORD14E-201ENST00000364009 85 ntBASIC-3.25□□□□□ -2.93
VCANP13611 Y_RNA.646-201ENST00000410980 101 ntBASIC-3.25□□□□□ -2.93
VCANP13611 AC114878.1-201ENST00000441166 358 ntBASIC-3.25□□□□□ -2.93
VCANP13611 RNU6-458P-201ENST00000384179 107 ntBASIC-3.25□□□□□ -2.93
VCANP13611 U6.58-201ENST00000613107 107 ntBASIC-3.25□□□□□ -2.93
VCANP13611 MIR2113-201ENST00000459007 91 ntBASIC-3.25□□□□□ -2.93
VCANP13611 AC004467.1-201ENST00000615678 330 ntBASIC-3.25□□□□□ -2.93
VCANP13611 RNU6-609P-201ENST00000365459 107 ntBASIC-3.26□□□□□ -2.93
VCANP13611 SNORA69-201ENST00000383895 132 ntBASIC-3.26□□□□□ -2.93
VCANP13611 MIR548I2-201ENST00000408348 149 ntBASIC-3.26□□□□□ -2.93
VCANP13611 MTND2P6-201ENST00000455337 1030 ntBASIC-3.26□□□□□ -2.93
VCANP13611 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-3.26□□□□□ -2.93
VCANP13611 AC008628.2-201ENST00000502605 298 ntBASIC-3.26□□□□□ -2.93
VCANP13611 RPL39P36-201ENST00000490784 156 ntBASIC-3.26□□□□□ -2.93
VCANP13611 AL078596.1-201ENST00000624856 447 ntBASIC-3.26□□□□□ -2.93
VCANP13611 AC026470.2-201ENST00000561492 181 ntBASIC-3.27□□□□□ -2.93
VCANP13611 AL157392.4-201ENST00000609756 345 ntBASIC-3.27□□□□□ -2.93
VCANP13611 AC127459.3-201ENST00000624328 466 ntBASIC-3.27□□□□□ -2.93
VCANP13611 SNORA31.3-201ENST00000516029 96 ntBASIC-3.27□□□□□ -2.93
VCANP13611 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-3.27□□□□□ -2.93
VCANP13611 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.27□□□□□ -2.93
VCANP13611 SNORA27.2-201ENST00000363365 126 ntBASIC-3.28□□□□□ -2.93
VCANP13611 Y_RNA.633-201ENST00000459107 95 ntBASIC-3.28□□□□□ -2.93
VCANP13611 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-3.28□□□□□ -2.93
VCANP13611 AC103706.2-201ENST00000638080 240 ntBASIC-3.28□□□□□ -2.93
VCANP13611 RNU6-645P-201ENST00000364649 106 ntBASIC-3.28□□□□□ -2.93
VCANP13611 RNU7-53P-201ENST00000516705 60 ntBASIC-3.28□□□□□ -2.93
VCANP13611 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-3.28□□□□□ -2.93
VCANP13611 RNU6-832P-201ENST00000363319 107 ntBASIC-3.29□□□□□ -2.94
VCANP13611 U3.4-201ENST00000363352 213 ntBASIC-3.29□□□□□ -2.94
VCANP13611 RNU6-913P-201ENST00000390913 95 ntBASIC-3.29□□□□□ -2.94
VCANP13611 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-3.29□□□□□ -2.94
VCANP13611 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-3.29□□□□□ -2.94
VCANP13611 AP000720.1-201ENST00000625091 483 ntBASIC-3.29□□□□□ -2.94
VCANP13611 RNU6-340P-201ENST00000364005 107 ntBASIC-3.29□□□□□ -2.94
VCANP13611 AL590084.2-201ENST00000401481 382 ntBASIC-3.29□□□□□ -2.94
VCANP13611 AC079140.5-201ENST00000507882 310 ntBASIC-3.29□□□□□ -2.94
VCANP13611 Y_RNA.714-201ENST00000517065 90 ntBASIC-3.29□□□□□ -2.94
VCANP13611 RNU6-430P-201ENST00000517078 107 ntBASIC-3.29□□□□□ -2.94
VCANP13611 AC018865.2-201ENST00000423631 129 ntBASIC-3.29□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms