Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 snoU13.21-201ENST00000459368 105 ntBASIC1.07□□□□□ -2.24
PCNAP12004 RNU2-60P-201ENST00000517290 128 ntBASIC1.07□□□□□ -2.24
PCNAP12004 MTND5P41-201ENST00000517498 206 ntBASIC1.07□□□□□ -2.24
PCNAP12004 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
PCNAP12004 RNU6-1187P-201ENST00000364771 110 ntBASIC1.06□□□□□ -2.24
PCNAP12004 Y_RNA.454-201ENST00000384224 113 ntBASIC1.06□□□□□ -2.24
PCNAP12004 RNA5SP236-201ENST00000516169 116 ntBASIC1.06□□□□□ -2.24
PCNAP12004 MIR3646-201ENST00000578301 84 ntBASIC1.06□□□□□ -2.24
PCNAP12004 MIR3144-201ENST00000579460 79 ntBASIC1.06□□□□□ -2.24
PCNAP12004 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
PCNAP12004 uc_338.6-201ENST00000613544 171 ntBASIC1.06□□□□□ -2.24
PCNAP12004 MIR6717-201ENST00000622747 73 ntBASIC1.06□□□□□ -2.24
PCNAP12004 AC021753.1-201ENST00000635724 168 ntBASIC1.06□□□□□ -2.24
PCNAP12004 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
PCNAP12004 RNU6-449P-201ENST00000383914 107 ntBASIC1.05□□□□□ -2.24
PCNAP12004 SNORD38B-201ENST00000384690 67 ntBASIC1.05□□□□□ -2.24
PCNAP12004 SNORD12C-201ENST00000386307 89 ntBASIC1.05□□□□□ -2.24
PCNAP12004 MT-TR-201ENST00000387439 65 ntBASIC1.05□□□□□ -2.24
PCNAP12004 AP000753.3-201ENST00000604083 169 ntBASIC1.05□□□□□ -2.24
PCNAP12004 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
PCNAP12004 AC106800.4-201ENST00000614905 153 ntBASIC1.05□□□□□ -2.24
PCNAP12004 SNORD38B-202ENST00000625943 69 ntBASIC1.05□□□□□ -2.24
PCNAP12004 SNORD113.3-201ENST00000364630 78 ntBASIC1.04□□□□□ -2.24
PCNAP12004 Y_RNA.555-201ENST00000384673 110 ntBASIC1.04□□□□□ -2.24
PCNAP12004 AC015818.7-201ENST00000428754 109 ntBASIC1.04□□□□□ -2.24
PCNAP12004 AC087499.7-201ENST00000441958 109 ntBASIC1.04□□□□□ -2.24
PCNAP12004 Y_RNA.686-201ENST00000516548 134 ntBASIC1.04□□□□□ -2.24
PCNAP12004 AC112693.2-201ENST00000556538 232 ntBASIC1.04□□□□□ -2.24
PCNAP12004 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.04□□□□□ -2.24
PCNAP12004 MIR6740-201ENST00000618268 113 ntBASIC1.04□□□□□ -2.24
PCNAP12004 Y_RNA.778-201ENST00000620203 90 ntBASIC1.04□□□□□ -2.24
PCNAP12004 Y_RNA.251-201ENST00000364551 99 ntBASIC1.03□□□□□ -2.24
PCNAP12004 MT-TN-201ENST00000387400 73 ntBASIC1.03□□□□□ -2.24
PCNAP12004 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.03□□□□□ -2.24
PCNAP12004 RPS3AP1-201ENST00000413190 320 ntBASIC1.03□□□□□ -2.24
PCNAP12004 RNU7-62P-201ENST00000458856 62 ntBASIC1.03□□□□□ -2.24
PCNAP12004 AC021613.1-201ENST00000623880 111 ntBASIC1.03□□□□□ -2.24
PCNAP12004 AC091895.1-201ENST00000624494 256 ntBASIC1.03□□□□□ -2.24
PCNAP12004 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PCNAP12004 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
PCNAP12004 Y_RNA.168-201ENST00000363740 102 ntBASIC1.02□□□□□ -2.25
PCNAP12004 Y_RNA.327-201ENST00000365201 102 ntBASIC1.02□□□□□ -2.25
PCNAP12004 RNU6-1319P-201ENST00000390855 104 ntBASIC1.02□□□□□ -2.25
PCNAP12004 RNU6-747P-201ENST00000390928 104 ntBASIC1.02□□□□□ -2.25
PCNAP12004 Y_RNA.580-201ENST00000391004 95 ntBASIC1.02□□□□□ -2.25
PCNAP12004 Y_RNA.584-201ENST00000391090 114 ntBASIC1.02□□□□□ -2.25
PCNAP12004 RNU6-241P-201ENST00000391148 104 ntBASIC1.02□□□□□ -2.25
PCNAP12004 RNU6-460P-201ENST00000391158 108 ntBASIC1.02□□□□□ -2.25
PCNAP12004 MIR942-201ENST00000401111 86 ntBASIC1.02□□□□□ -2.25
PCNAP12004 RNU6-177P-201ENST00000411257 104 ntBASIC1.02□□□□□ -2.25
PCNAP12004 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
PCNAP12004 SNORA25.12-201ENST00000516202 82 ntBASIC1.02□□□□□ -2.25
PCNAP12004 MIR4264-201ENST00000583520 66 ntBASIC1.02□□□□□ -2.25
PCNAP12004 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.02□□□□□ -2.25
PCNAP12004 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
PCNAP12004 snoU13.31-201ENST00000607291 104 ntBASIC1.02□□□□□ -2.25
PCNAP12004 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.01□□□□□ -2.25
PCNAP12004 RNY1P6-201ENST00000384193 109 ntBASIC1.01□□□□□ -2.25
PCNAP12004 SNORD111-201ENST00000408139 94 ntBASIC1.01□□□□□ -2.25
PCNAP12004 RNU6-994P-201ENST00000410507 111 ntBASIC1.01□□□□□ -2.25
PCNAP12004 SNORD83.1-201ENST00000411362 77 ntBASIC1.01□□□□□ -2.25
PCNAP12004 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
PCNAP12004 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
PCNAP12004 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
PCNAP12004 AC010332.2-201ENST00000613083 1904 ntBASIC1□□□□□ -2.25
PCNAP12004 MIR377-201ENST00000362145 69 ntBASIC1□□□□□ -2.25
PCNAP12004 RNU6-349P-201ENST00000362402 107 ntBASIC1□□□□□ -2.25
PCNAP12004 Y_RNA.180-201ENST00000363867 113 ntBASIC1□□□□□ -2.25
PCNAP12004 RNU6-309P-201ENST00000364573 106 ntBASIC1□□□□□ -2.25
PCNAP12004 SNORA20-201ENST00000384662 132 ntBASIC1□□□□□ -2.25
PCNAP12004 MIR588-201ENST00000384900 83 ntBASIC1□□□□□ -2.25
PCNAP12004 POLR2J4-204ENST00000418424 324 ntBASIC1□□□□□ -2.25
PCNAP12004 RNU7-197P-201ENST00000458836 62 ntBASIC1□□□□□ -2.25
PCNAP12004 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
PCNAP12004 RNA5SP272-201ENST00000516095 111 ntBASIC1□□□□□ -2.25
PCNAP12004 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1□□□□□ -2.25
PCNAP12004 MIR6841-201ENST00000637129 72 ntBASIC1□□□□□ -2.25
PCNAP12004 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
PCNAP12004 SNORA22.1-201ENST00000362701 134 ntBASIC0.99□□□□□ -2.25
PCNAP12004 Y_RNA.170-201ENST00000363746 110 ntBASIC0.99□□□□□ -2.25
PCNAP12004 RNU6-580P-201ENST00000365159 107 ntBASIC0.99□□□□□ -2.25
PCNAP12004 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
PCNAP12004 RNU6-1237P-201ENST00000384777 107 ntBASIC0.99□□□□□ -2.25
PCNAP12004 RNU5E-3P-201ENST00000515913 68 ntBASIC0.99□□□□□ -2.25
PCNAP12004 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.99□□□□□ -2.25
PCNAP12004 RNU6-240P-201ENST00000516098 97 ntBASIC0.99□□□□□ -2.25
PCNAP12004 RNU6-1258P-201ENST00000516911 111 ntBASIC0.99□□□□□ -2.25
PCNAP12004 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
PCNAP12004 RNU6-690P-201ENST00000365242 106 ntBASIC0.98□□□□□ -2.25
PCNAP12004 RNU6-53P-201ENST00000365367 106 ntBASIC0.98□□□□□ -2.25
PCNAP12004 RNU6-209P-201ENST00000384118 107 ntBASIC0.98□□□□□ -2.25
PCNAP12004 SNORD89-201ENST00000390981 114 ntBASIC0.98□□□□□ -2.25
PCNAP12004 RNA5SP261-201ENST00000410536 106 ntBASIC0.98□□□□□ -2.25
PCNAP12004 snoU13.2-201ENST00000459201 104 ntBASIC0.98□□□□□ -2.25
PCNAP12004 Y_RNA.651-201ENST00000459380 103 ntBASIC0.98□□□□□ -2.25
PCNAP12004 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.98□□□□□ -2.25
PCNAP12004 Y_RNA.690-201ENST00000516603 95 ntBASIC0.98□□□□□ -2.25
PCNAP12004 RNU6-255P-201ENST00000516957 105 ntBASIC0.98□□□□□ -2.25
PCNAP12004 MIR3152-201ENST00000579801 74 ntBASIC0.98□□□□□ -2.25
PCNAP12004 Y_RNA.171-201ENST00000363760 102 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms