Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RNU6-653P-201ENST00000363074 106 ntBASIC0.3□□□□□ -2.36
APOA4P06727 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
APOA4P06727 Y_RNA.199-201ENST00000364014 102 ntBASIC0.3□□□□□ -2.36
APOA4P06727 snoU13.18-201ENST00000459483 104 ntBASIC0.3□□□□□ -2.36
APOA4P06727 RNU7-80P-201ENST00000459562 61 ntBASIC0.3□□□□□ -2.36
APOA4P06727 AC022523.2-201ENST00000561045 150 ntBASIC0.3□□□□□ -2.36
APOA4P06727 MIR3678-201ENST00000578455 94 ntBASIC0.3□□□□□ -2.36
APOA4P06727 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.3□□□□□ -2.36
APOA4P06727 AL589743.1-201ENST00000551932 2712 ntBASIC0.29□□□□□ -2.36
APOA4P06727 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
APOA4P06727 Y_RNA.23-201ENST00000362496 106 ntBASIC0.29□□□□□ -2.36
APOA4P06727 Y_RNA.237-201ENST00000364439 102 ntBASIC0.29□□□□□ -2.36
APOA4P06727 Y_RNA.269-201ENST00000364685 89 ntBASIC0.29□□□□□ -2.36
APOA4P06727 SNORA33.2-201ENST00000365413 134 ntBASIC0.29□□□□□ -2.36
APOA4P06727 Y_RNA.542-201ENST00000384641 111 ntBASIC0.29□□□□□ -2.36
APOA4P06727 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.29□□□□□ -2.36
APOA4P06727 RNU7-45P-201ENST00000459460 63 ntBASIC0.29□□□□□ -2.36
APOA4P06727 U2.14-201ENST00000615943 113 ntBASIC0.29□□□□□ -2.36
APOA4P06727 MIR376A2-201ENST00000636782 80 ntBASIC0.29□□□□□ -2.36
APOA4P06727 Y_RNA.430-201ENST00000384081 110 ntBASIC0.28□□□□□ -2.36
APOA4P06727 RNU6-1109P-201ENST00000391187 107 ntBASIC0.28□□□□□ -2.36
APOA4P06727 SNORD93-201ENST00000408813 74 ntBASIC0.28□□□□□ -2.36
APOA4P06727 RNU6-651P-201ENST00000411040 105 ntBASIC0.28□□□□□ -2.36
APOA4P06727 MIR5197-201ENST00000583721 112 ntBASIC0.28□□□□□ -2.36
APOA4P06727 AL356055.1-201ENST00000602528 446 ntBASIC0.28□□□□□ -2.36
APOA4P06727 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.28□□□□□ -2.36
APOA4P06727 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
APOA4P06727 SNORD118-201ENST00000363593 134 ntBASIC0.27□□□□□ -2.37
APOA4P06727 Y_RNA.355-201ENST00000365462 98 ntBASIC0.27□□□□□ -2.37
APOA4P06727 RNU6-639P-201ENST00000384074 107 ntBASIC0.27□□□□□ -2.37
APOA4P06727 Y_RNA.454-201ENST00000384224 113 ntBASIC0.27□□□□□ -2.37
APOA4P06727 MIR598-201ENST00000384868 97 ntBASIC0.27□□□□□ -2.37
APOA4P06727 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
APOA4P06727 AL662814.1-201ENST00000617364 121 ntBASIC0.27□□□□□ -2.37
APOA4P06727 MIR335-201ENST00000362173 94 ntBASIC0.26□□□□□ -2.37
APOA4P06727 Y_RNA.42-201ENST00000362660 108 ntBASIC0.26□□□□□ -2.37
APOA4P06727 SNORA8.2-201ENST00000384372 139 ntBASIC0.26□□□□□ -2.37
APOA4P06727 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
APOA4P06727 Y_RNA.590-201ENST00000410140 107 ntBASIC0.26□□□□□ -2.37
APOA4P06727 RNA5SP237-201ENST00000410414 113 ntBASIC0.26□□□□□ -2.37
APOA4P06727 RNU4-83P-201ENST00000410863 133 ntBASIC0.26□□□□□ -2.37
APOA4P06727 Y_RNA.618-201ENST00000410949 107 ntBASIC0.26□□□□□ -2.37
APOA4P06727 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.26□□□□□ -2.37
APOA4P06727 MTCYBP6-201ENST00000441810 138 ntBASIC0.26□□□□□ -2.37
APOA4P06727 RPL39P25-201ENST00000449384 154 ntBASIC0.26□□□□□ -2.37
APOA4P06727 MIR3152-201ENST00000579801 74 ntBASIC0.26□□□□□ -2.37
APOA4P06727 MIR3129-201ENST00000581095 76 ntBASIC0.26□□□□□ -2.37
APOA4P06727 MIR4282-201ENST00000583613 67 ntBASIC0.26□□□□□ -2.37
APOA4P06727 SNORA25.18-201ENST00000607153 114 ntBASIC0.26□□□□□ -2.37
APOA4P06727 MIR8066-201ENST00000617280 78 ntBASIC0.26□□□□□ -2.37
APOA4P06727 AC091932.4-201ENST00000623386 200 ntBASIC0.26□□□□□ -2.37
APOA4P06727 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.26□□□□□ -2.37
APOA4P06727 RNU6-1292P-201ENST00000383856 107 ntBASIC0.25□□□□□ -2.37
APOA4P06727 Y_RNA.508-201ENST00000384502 114 ntBASIC0.25□□□□□ -2.37
APOA4P06727 RNU6-713P-201ENST00000384761 107 ntBASIC0.25□□□□□ -2.37
APOA4P06727 RNU6-381P-201ENST00000391259 108 ntBASIC0.25□□□□□ -2.37
APOA4P06727 AP003327.1-201ENST00000529684 127 ntBASIC0.25□□□□□ -2.37
APOA4P06727 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.25□□□□□ -2.37
APOA4P06727 AL365265.1-201ENST00000621045 234 ntBASIC0.25□□□□□ -2.37
APOA4P06727 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
APOA4P06727 RNY1-201ENST00000364228 113 ntBASIC0.24□□□□□ -2.37
APOA4P06727 Y_RNA.567-201ENST00000384736 106 ntBASIC0.24□□□□□ -2.37
APOA4P06727 SNORA79-201ENST00000408376 140 ntBASIC0.24□□□□□ -2.37
APOA4P06727 AC133485.4-201ENST00000561835 220 ntBASIC0.24□□□□□ -2.37
APOA4P06727 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.24□□□□□ -2.37
APOA4P06727 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.24□□□□□ -2.37
APOA4P06727 RNU6-797P-201ENST00000363101 109 ntBASIC0.23□□□□□ -2.37
APOA4P06727 RNU6-728P-201ENST00000365375 104 ntBASIC0.23□□□□□ -2.37
APOA4P06727 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.23□□□□□ -2.37
APOA4P06727 Y_RNA.679-201ENST00000516416 91 ntBASIC0.23□□□□□ -2.37
APOA4P06727 Y_RNA.701-201ENST00000516812 110 ntBASIC0.23□□□□□ -2.37
APOA4P06727 AL365205.2-201ENST00000594586 68 ntBASIC0.23□□□□□ -2.37
APOA4P06727 AC078938.1-201ENST00000620993 318 ntBASIC0.23□□□□□ -2.37
APOA4P06727 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.23□□□□□ -2.37
APOA4P06727 AL596211.1-201ENST00000569873 2277 ntBASIC0.22□□□□□ -2.37
APOA4P06727 RNA5SP62-201ENST00000363457 110 ntBASIC0.22□□□□□ -2.37
APOA4P06727 SNORD114-23-201ENST00000363536 72 ntBASIC0.22□□□□□ -2.37
APOA4P06727 Y_RNA.176-201ENST00000363815 109 ntBASIC0.22□□□□□ -2.37
APOA4P06727 RNU6-597P-201ENST00000365620 102 ntBASIC0.22□□□□□ -2.37
APOA4P06727 RNU6-863P-201ENST00000515989 104 ntBASIC0.22□□□□□ -2.37
APOA4P06727 RNU6-561P-201ENST00000516222 102 ntBASIC0.22□□□□□ -2.37
APOA4P06727 AL442663.2-201ENST00000554385 511 ntBASIC0.22□□□□□ -2.37
APOA4P06727 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
APOA4P06727 RNU4-17P-201ENST00000365598 141 ntBASIC0.21□□□□□ -2.38
APOA4P06727 SNORA20-201ENST00000384662 132 ntBASIC0.21□□□□□ -2.38
APOA4P06727 RNU4-43P-201ENST00000410628 137 ntBASIC0.21□□□□□ -2.38
APOA4P06727 RNU6-469P-201ENST00000516253 101 ntBASIC0.21□□□□□ -2.38
APOA4P06727 MIR4431-201ENST00000579990 94 ntBASIC0.21□□□□□ -2.38
APOA4P06727 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
APOA4P06727 U8.15-201ENST00000390947 134 ntBASIC0.2□□□□□ -2.38
APOA4P06727 Y_RNA.617-201ENST00000410920 90 ntBASIC0.2□□□□□ -2.38
APOA4P06727 AC044792.1-201ENST00000593294 196 ntBASIC0.2□□□□□ -2.38
APOA4P06727 MIR6841-201ENST00000637129 72 ntBASIC0.2□□□□□ -2.38
APOA4P06727 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
APOA4P06727 SNORA36.1-201ENST00000363424 132 ntBASIC0.19□□□□□ -2.38
APOA4P06727 Y_RNA.416-201ENST00000384014 113 ntBASIC0.19□□□□□ -2.38
APOA4P06727 Y_RNA.512-201ENST00000384518 102 ntBASIC0.19□□□□□ -2.38
APOA4P06727 AL512326.2-201ENST00000426359 151 ntBASIC0.19□□□□□ -2.38
APOA4P06727 Y_RNA.673-201ENST00000516306 88 ntBASIC0.19□□□□□ -2.38
APOA4P06727 AC141846.1-201ENST00000568348 142 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms