Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 Y_RNA.558-201ENST00000384685 113 ntBASIC2.35□□□□□ -2.03
PDGFAP04085 MIR27B-201ENST00000385129 97 ntBASIC2.35□□□□□ -2.03
PDGFAP04085 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PDGFAP04085 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PDGFAP04085 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.35□□□□□ -2.03
PDGFAP04085 MIR1302-4-201ENST00000408701 150 ntBASIC2.35□□□□□ -2.03
PDGFAP04085 AL353813.1-201ENST00000440700 253 ntBASIC2.35□□□□□ -2.03
PDGFAP04085 RNU6-922P-201ENST00000516753 99 ntBASIC2.35□□□□□ -2.03
PDGFAP04085 MIR8074-201ENST00000615081 81 ntBASIC2.35□□□□□ -2.03
PDGFAP04085 MALAT1.1-201ENST00000618249 95 ntBASIC2.35□□□□□ -2.03
PDGFAP04085 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PDGFAP04085 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PDGFAP04085 SNORD45B-201ENST00000364617 72 ntBASIC2.34□□□□□ -2.03
PDGFAP04085 SNORD115-35-201ENST00000365122 82 ntBASIC2.34□□□□□ -2.03
PDGFAP04085 RNU6-1201P-201ENST00000384227 107 ntBASIC2.34□□□□□ -2.03
PDGFAP04085 SNORD41-201ENST00000386967 70 ntBASIC2.34□□□□□ -2.03
PDGFAP04085 RN7SKP223-201ENST00000410582 62 ntBASIC2.34□□□□□ -2.03
PDGFAP04085 RNU7-2P-201ENST00000516096 62 ntBASIC2.34□□□□□ -2.03
PDGFAP04085 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.34□□□□□ -2.03
PDGFAP04085 AC015688.6-201ENST00000577737 104 ntBASIC2.34□□□□□ -2.03
PDGFAP04085 AC096720.1-201ENST00000604441 183 ntBASIC2.34□□□□□ -2.03
PDGFAP04085 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
PDGFAP04085 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PDGFAP04085 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PDGFAP04085 RNU6-1313P-201ENST00000362622 102 ntBASIC2.33□□□□□ -2.04
PDGFAP04085 MIR764-201ENST00000390811 85 ntBASIC2.33□□□□□ -2.04
PDGFAP04085 MIR1289-2-201ENST00000408360 111 ntBASIC2.33□□□□□ -2.04
PDGFAP04085 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.33□□□□□ -2.04
PDGFAP04085 AC009474.2-201ENST00000451383 136 ntBASIC2.33□□□□□ -2.04
PDGFAP04085 SNORA77B-201ENST00000578179 125 ntBASIC2.33□□□□□ -2.04
PDGFAP04085 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.33□□□□□ -2.04
PDGFAP04085 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PDGFAP04085 RNU6-170P-201ENST00000362832 104 ntBASIC2.32□□□□□ -2.04
PDGFAP04085 Y_RNA.96-201ENST00000363092 109 ntBASIC2.32□□□□□ -2.04
PDGFAP04085 RNU6-1086P-201ENST00000410930 100 ntBASIC2.32□□□□□ -2.04
PDGFAP04085 AC096949.1-201ENST00000412047 152 ntBASIC2.32□□□□□ -2.04
PDGFAP04085 AC004941.2-201ENST00000427009 228 ntBASIC2.32□□□□□ -2.04
PDGFAP04085 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.32□□□□□ -2.04
PDGFAP04085 MIR4648-201ENST00000580107 72 ntBASIC2.32□□□□□ -2.04
PDGFAP04085 AL442128.1-201ENST00000615151 90 ntBASIC2.32□□□□□ -2.04
PDGFAP04085 WWP1P1-201ENST00000466609 2769 ntBASIC2.32□□□□□ -2.04
PDGFAP04085 Y_RNA.342-201ENST00000365352 113 ntBASIC2.31□□□□□ -2.04
PDGFAP04085 RNA5SP425-201ENST00000410336 112 ntBASIC2.31□□□□□ -2.04
PDGFAP04085 AC090844.1-201ENST00000422019 156 ntBASIC2.31□□□□□ -2.04
PDGFAP04085 RPL31P63-201ENST00000422565 375 ntBASIC2.31□□□□□ -2.04
PDGFAP04085 Y_RNA.659-201ENST00000515994 113 ntBASIC2.31□□□□□ -2.04
PDGFAP04085 RNU7-79P-201ENST00000516082 62 ntBASIC2.31□□□□□ -2.04
PDGFAP04085 AC121758.2-201ENST00000553271 193 ntBASIC2.31□□□□□ -2.04
PDGFAP04085 MIR4299-201ENST00000577899 72 ntBASIC2.31□□□□□ -2.04
PDGFAP04085 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
PDGFAP04085 GHRLOS.1-201ENST00000610995 70 ntBASIC2.31□□□□□ -2.04
PDGFAP04085 MIR206-201ENST00000384872 86 ntBASIC2.3□□□□□ -2.04
PDGFAP04085 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.3□□□□□ -2.04
PDGFAP04085 HSPE1P24-201ENST00000450782 238 ntBASIC2.3□□□□□ -2.04
PDGFAP04085 AC108729.3-201ENST00000513484 108 ntBASIC2.3□□□□□ -2.04
PDGFAP04085 RNU6-795P-201ENST00000516323 103 ntBASIC2.3□□□□□ -2.04
PDGFAP04085 RNU6-250P-201ENST00000516958 103 ntBASIC2.3□□□□□ -2.04
PDGFAP04085 AC019129.1-201ENST00000403786 261 ntBASIC2.29□□□□□ -2.04
PDGFAP04085 RNA5SP237-201ENST00000410414 113 ntBASIC2.29□□□□□ -2.04
PDGFAP04085 RNU6-844P-201ENST00000517175 102 ntBASIC2.29□□□□□ -2.04
PDGFAP04085 AC012531.4-201ENST00000616509 177 ntBASIC2.29□□□□□ -2.04
PDGFAP04085 SNORD73B-201ENST00000364394 72 ntBASIC2.28□□□□□ -2.04
PDGFAP04085 RNY1P7-201ENST00000384743 110 ntBASIC2.28□□□□□ -2.04
PDGFAP04085 RPL39P39-201ENST00000455840 151 ntBASIC2.28□□□□□ -2.04
PDGFAP04085 snoU13.23-201ENST00000458863 104 ntBASIC2.28□□□□□ -2.04
PDGFAP04085 RNU7-61P-201ENST00000515897 61 ntBASIC2.28□□□□□ -2.04
PDGFAP04085 SNORD67.1-201ENST00000516618 108 ntBASIC2.28□□□□□ -2.04
PDGFAP04085 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.28□□□□□ -2.04
PDGFAP04085 AC067747.1-201ENST00000608026 250 ntBASIC2.28□□□□□ -2.04
PDGFAP04085 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PDGFAP04085 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PDGFAP04085 SNORD114-10-201ENST00000363409 72 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-1237P-201ENST00000384777 107 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 MIR17-201ENST00000385012 84 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNA5SP210-201ENST00000391034 120 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 AL359511.1-201ENST00000402970 211 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-447P-201ENST00000410293 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-1118P-201ENST00000410382 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-1076P-201ENST00000410397 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-355P-201ENST00000410427 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-791P-201ENST00000410467 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-705P-201ENST00000410601 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-1100P-201ENST00000410691 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-860P-201ENST00000410860 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-1217P-201ENST00000411276 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 RNU6-785P-201ENST00000411324 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 AL591806.2-201ENST00000433122 173 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 MIR3192-201ENST00000584920 77 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 AC046143.2-201ENST00000609789 160 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 AL096861.1-201ENST00000610899 123 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 U6.90-201ENST00000614007 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 U6.70-201ENST00000620287 104 ntBASIC2.27□□□□□ -2.05
PDGFAP04085 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PDGFAP04085 Y_RNA.95-201ENST00000363079 95 ntBASIC2.26□□□□□ -2.05
PDGFAP04085 RNU6-865P-201ENST00000364772 107 ntBASIC2.26□□□□□ -2.05
PDGFAP04085 RNU6-60P-201ENST00000364792 103 ntBASIC2.26□□□□□ -2.05
PDGFAP04085 MRPL35P3-201ENST00000421557 364 ntBASIC2.26□□□□□ -2.05
PDGFAP04085 RPS12P2-201ENST00000439728 269 ntBASIC2.26□□□□□ -2.05
PDGFAP04085 SNORA44.1-201ENST00000517031 108 ntBASIC2.26□□□□□ -2.05
PDGFAP04085 AC015712.3-201ENST00000559380 164 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms